Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_F06
         (676 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    22   4.7  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    22   4.7  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    22   4.7  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   6.1  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 240 EXETVQFLRQTNRNQLLLHRRKLR 311
           E  T QFL Q  ++ +L+H +  R
Sbjct: 419 EIVTAQFLNQLKKSSVLVHTKNGR 442


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -2

Query: 420 LIQSPILMS*SLICSQYL*YFRM 352
           L++ P + S  L C +YL +F+M
Sbjct: 385 LLRLPAIRSIGLKCLEYLFFFKM 407


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -2

Query: 420 LIQSPILMS*SLICSQYL*YFRM 352
           L++ P + S  L C +YL +F+M
Sbjct: 385 LLRLPAIRSIGLKCLEYLFFFKM 407


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -2

Query: 588 QLCYRLGLGCRCSQLLGTVLQY 523
           +L Y++GL   C+ +LG  L +
Sbjct: 205 ELAYKMGLESTCTLILGRHLGF 226


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,740
Number of Sequences: 438
Number of extensions: 2560
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20464920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)