Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_F03
(647 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 247 9e-67
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 211 7e-56
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 184 1e-47
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 183 2e-47
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 150 1e-37
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 122 4e-29
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 109 3e-25
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 88 1e-18
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 62 9e-11
SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr ... 29 0.44
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 1.8
SPBP8B7.07c |set6||histone lysine methyltransferase Set6 |Schizo... 27 2.3
SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25 |Sch... 27 2.3
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 27 3.1
SPBC29A3.01 |||heavy metal ATPase |Schizosaccharomyces pombe|chr... 27 3.1
SPBC32H8.10 |cdk9||cyclin-dependent protein kinase Cdk9 |Schizos... 27 3.1
SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr 1||... 26 4.1
SPCC553.01c ||SPCC736.01c|meiotic chromosome segregation protein... 26 5.4
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 5.4
SPAP7G5.06 |||amino acid permease, unknown 4|Schizosaccharomyces... 26 5.4
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 26 5.4
SPBC56F2.11 |met6||homoserine O-acetyltransferase|Schizosaccharo... 25 7.1
SPCC1840.03 |sal3|pse1|karyopherin Sal3|Schizosaccharomyces pomb... 25 9.4
SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|ch... 25 9.4
SPAC23D3.13c |||guanyl-nucleotide exchange factor|Schizosaccharo... 25 9.4
SPCC24B10.17 |emp24||COPII-coated vesicle component Emp24 |Schiz... 25 9.4
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 25 9.4
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 247 bits (605), Expect = 9e-67
Identities = 113/158 (71%), Positives = 125/158 (79%)
Frame = +3
Query: 105 FFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGD 284
FFDV + PLG+IV +L DV PKT NFRALCTGEKG+GY GS FHRVIP FMLQGGD
Sbjct: 5 FFDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGGD 64
Query: 285 FTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRH 464
FT NGTGGKSIYG KF DENF LKH PG+LSMANAG +TNGSQFFITTV T WLDG+H
Sbjct: 65 FTRGNGTGGKSIYGEKFPDENFALKHNKPGLLSMANAGPNTNGSQFFITTVVTPWLDGKH 124
Query: 465 VVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQI 578
VVFG V EGM+VVK++E+ GS SG T RIVI CG +
Sbjct: 125 VVFGEVTEGMDVVKKVESLGSNSGATRARIVIDKCGTV 162
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 211 bits (515), Expect = 7e-56
Identities = 97/147 (65%), Positives = 112/147 (76%)
Frame = +3
Query: 72 ANTGKMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHR 251
AN G V+FD+ D LG++ I L PKT ENFRAL TGEKGFGY+GSIFHR
Sbjct: 19 ANRGPKVTDTVYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALATGEKGFGYEGSIFHR 78
Query: 252 VIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFIT 431
VIPNFM+QGGD T +GTGGKSIYG++F DENF L H PG+LSMANAG D+NGSQFFIT
Sbjct: 79 VIPNFMIQGGDITKGDGTGGKSIYGSRFPDENFKLSHQRPGLLSMANAGPDSNGSQFFIT 138
Query: 432 TVKTSWLDGRHVVFGNVVEGMEVVKQI 512
TVKT WLDG HVVFG V+ G ++VK+I
Sbjct: 139 TVKTPWLDGHHVVFGEVLSGYDIVKKI 165
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 184 bits (448), Expect = 1e-47
Identities = 89/169 (52%), Positives = 115/169 (68%), Gaps = 8/169 (4%)
Frame = +3
Query: 96 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGE------KGFGYKGSIFHRVI 257
P VF D+ +D LG+I I L S + PKT ENFR CTGE K GYK S FHR+I
Sbjct: 5 PVVFMDIAIDGRLLGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIGYKNSTFHRII 64
Query: 258 PNFMLQGGDFTNHNGTGGKSIYGNK-FEDENFTLKHTGPGVLSMANAGADTNGSQFFITT 434
FM+QGGDF + +GTG +I+ ++ F DENFTLKH PG+LSMANAG D+NG QFFITT
Sbjct: 65 QGFMIQGGDFVSGDGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAGKDSNGCQFFITT 124
Query: 435 VKTSWLDGRHVVFGNVVEGMEVVKQIE-TFGSQSGKTSKRIVIKDCGQI 578
V +LDG+HVVFG V+EG ++VK+IE T + + + I +CG++
Sbjct: 125 VPCDFLDGKHVVFGEVIEGYDIVKEIESTPVGANSRPKSNVAIVECGEM 173
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 183 bits (446), Expect = 2e-47
Identities = 90/160 (56%), Positives = 111/160 (69%), Gaps = 4/160 (2%)
Frame = +3
Query: 105 FFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG----YKGSIFHRVIPNFML 272
+F +++D I EL +V PKT +NF +LC G + G YKGS FHRVI NFML
Sbjct: 6 YFKISIDGKIQPTIYFELFDNVVPKTVKNFASLCNGFEKDGRCLTYKGSRFHRVIKNFML 65
Query: 273 QGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWL 452
QGGDFT NGTGG+SIYG KFEDENF LKH P +LSMANAG +TNGSQFFITTV T L
Sbjct: 66 QGGDFTRGNGTGGESIYGEKFEDENFELKHDKPFLLSMANAGPNTNGSQFFITTVPTPHL 125
Query: 453 DGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCG 572
DG+HVVFG V++G V+ IE +++ +VI++CG
Sbjct: 126 DGKHVVFGKVIQGKSTVRTIENLETKNDDPVVPVVIEECG 165
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 150 bits (364), Expect = 1e-37
Identities = 74/127 (58%), Positives = 94/127 (74%), Gaps = 1/127 (0%)
Frame = +3
Query: 135 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGK 314
LGKI+IEL ++ PKTC+NF L ++G+ Y G IFHRVIP+F++QGGD T G GG
Sbjct: 10 LGKILIELYTEHAPKTCQNFYTLA--KEGY-YDGVIFHRVIPDFVIQGGDPTG-TGRGGT 65
Query: 315 SIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEG 491
SIYG+KF+DE + L HTG G+LSMANAG +TN SQFFIT T WLDG+H +FG VV G
Sbjct: 66 SIYGDKFDDEIHSDLHHTGAGILSMANAGPNTNSSQFFITLAPTPWLDGKHTIFGRVVSG 125
Query: 492 MEVVKQI 512
+ V K++
Sbjct: 126 LSVCKRM 132
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 122 bits (294), Expect = 4e-29
Identities = 64/127 (50%), Positives = 83/127 (65%), Gaps = 1/127 (0%)
Frame = +3
Query: 138 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKS 317
G I I+L + PK +NF E G+ Y +IFHR+I NFM+QGGD +GTGG+S
Sbjct: 464 GDISIKLYPEEAPKAVQNFTT--HAENGY-YDNTIFHRIIKNFMIQGGDPLG-DGTGGES 519
Query: 318 IYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGM 494
I+ FEDE + LKH P +SMAN+G +TNGSQFFITT T WLDG+H +F G+
Sbjct: 520 IWKKDFEDEISPNLKHDRPFTVSMANSGPNTNGSQFFITTDLTPWLDGKHTIFARAYAGL 579
Query: 495 EVVKQIE 515
+VV +IE
Sbjct: 580 DVVHRIE 586
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 109 bits (262), Expect = 3e-25
Identities = 61/138 (44%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
Frame = +3
Query: 138 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKS 317
G+I IEL +D P NF L ++G+ Y+ +IFHR I FM+QGGD + G GG+S
Sbjct: 285 GEINIELHTDYAPHAVYNFVQLA--KQGY-YRNTIFHRNIARFMIQGGD-PSGTGRGGQS 340
Query: 318 IYGNKFEDENFT-LKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGM 494
I+G F+DE LKH G++SMAN G +TNGSQFFI LD +H +FG VV G+
Sbjct: 341 IWGKPFKDEFCNPLKHDDRGIISMANRGKNTNGSQFFILYGPAKHLDNKHTIFGRVVGGL 400
Query: 495 EVVKQIETFGSQSGKTSK 548
V+ +E + S K
Sbjct: 401 NVLDALEKVPTNSNDHPK 418
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 87.8 bits (208), Expect = 1e-18
Identities = 52/117 (44%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Frame = +3
Query: 138 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKS 317
G I IEL PK C NF LC +G+ Y G+I HRV+P F++QGGD T G GG+S
Sbjct: 22 GDIQIELWCKEVPKACRNFIQLCL--EGY-YDGTIVHRVVPEFLIQGGDPTG-TGMGGES 77
Query: 318 IYGNKFEDENF-TLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVV 485
IYG F E L+ G++ MA + N SQFFIT T +G+ +FG VV
Sbjct: 78 IYGEPFAVETHPRLRFIRRGLVGMACTENEGNNSQFFITLGPTPEWNGKQTLFGRVV 134
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 61.7 bits (143), Expect = 9e-11
Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 16/162 (9%)
Frame = +3
Query: 126 DAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGT 305
+ +G +VI+L PKTCENF LC K Y F+ + N+ Q GD G
Sbjct: 6 ETTVGDLVIDLFVKEAPKTCENFLKLC---KLKYYNFCPFYNIQHNYTCQTGDPLGPTGD 62
Query: 306 GGKSIY-----GNKFEDENF--TLKHTGPGVLSMANAGADTN-------GSQFFIT-TVK 440
GG+ ++ G +F F +L H G++SM+ A + GSQF IT +
Sbjct: 63 GGRCVWNVLNKGTRFFKAEFNPSLVHNKMGLVSMSTATISSRDDKLLVCGSQFIITLSDN 122
Query: 441 TSWLDGRHVVFGNVVEGMEVVKQI-ETFGSQSGKTSKRIVIK 563
LD R+ ++G V EG + + +I + + G+ + I IK
Sbjct: 123 LEGLDERYPIYGQVAEGFDTLLKINDAICDEEGQPYRDIRIK 164
>SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 736
Score = 29.5 bits (63), Expect = 0.44
Identities = 24/63 (38%), Positives = 34/63 (53%)
Frame = +1
Query: 166 TSLPRHVKTSVPCALARKASVTRAPFSIVSSPISCYKEGTSPTITALGESPSTAISSRTR 345
TS P H T+ A + + +RA S++S I KE +P+ITA SP +A S +
Sbjct: 303 TSSPLHQSTT---ANHPEKTPSRAAASLLS--ILDSKEKNTPSITAKAGSPQSAPSKASY 357
Query: 346 ISP 354
ISP
Sbjct: 358 ISP 360
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 27.5 bits (58), Expect = 1.8
Identities = 25/86 (29%), Positives = 40/86 (46%)
Frame = +1
Query: 106 SSTSLLTMPHWEKLLLS*EVTSLPRHVKTSVPCALARKASVTRAPFSIVSSPISCYKEGT 285
+STS ++P S + S P TS C + S+ S +S+PI+ T
Sbjct: 198 TSTSSTSIPIPPTSTSSTDTNSSPLPT-TSTSCTTS--TSIPTGGSSSLSTPITPTVPPT 254
Query: 286 SPTITALGESPSTAISSRTRISPLST 363
S + T++ P++ S+ T SPL T
Sbjct: 255 STSSTSIPIPPTSTSSTDTNSSPLPT 280
Score = 26.6 bits (56), Expect = 3.1
Identities = 25/86 (29%), Positives = 39/86 (45%)
Frame = +1
Query: 106 SSTSLLTMPHWEKLLLS*EVTSLPRHVKTSVPCALARKASVTRAPFSIVSSPISCYKEGT 285
+STS ++P S + S P TS C + T S+ S+PI+ T
Sbjct: 141 TSTSSTSIPIPPTSTSSTDTNSNPLPT-TSTSCTTSTSIPPTGGSSSL-STPITPTVPPT 198
Query: 286 SPTITALGESPSTAISSRTRISPLST 363
S + T++ P++ S+ T SPL T
Sbjct: 199 STSSTSIPIPPTSTSSTDTNSSPLPT 224
Score = 25.0 bits (52), Expect = 9.4
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +1
Query: 190 TSVPCALARKASVTRAPFSIVSSPISCYKEGTSPTITALGESPSTAISSRTRISPLST 363
TS C + T S+ S+PI+ TS + T++ P++ S+ T +PL T
Sbjct: 111 TSTSCTTSTSIPPTGGSSSL-STPITPTVPPTSTSSTSIPIPPTSTSSTDTNSNPLPT 167
>SPBP8B7.07c |set6||histone lysine methyltransferase Set6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 483
Score = 27.1 bits (57), Expect = 2.3
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +3
Query: 114 VTVDDAPLGKIVIELRSDVTPKTCENFRALCT 209
V D+ P+GKI+I R D+ N C+
Sbjct: 19 VATDNIPIGKIIIRKRVDILSLDSANLTRTCS 50
>SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 423
Score = 27.1 bits (57), Expect = 2.3
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 538 FPDWLPKVSICLTTSMPSTTFPKTTCLPS 452
FP WL K S CL +P T+ P T + S
Sbjct: 302 FP-WLKKNSFCLYLPIPLTSIPSTPSIRS 329
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 26.6 bits (56), Expect = 3.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 410 WFPVLHHHC 436
WFP +HHHC
Sbjct: 97 WFPEVHHHC 105
>SPBC29A3.01 |||heavy metal ATPase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 904
Score = 26.6 bits (56), Expect = 3.1
Identities = 13/53 (24%), Positives = 24/53 (45%)
Frame = -1
Query: 572 TTVFDNDSLRGLPRLAAKGLNLLDNFHAFNNIPKDNMSAIQPGGLDSGDEELG 414
T VFD + +L+ ++++DN +IPK+ A S + +G
Sbjct: 525 TVVFDKTGTLTVGKLSVTDISIVDNLEELLDIPKNIFWAFVKASESSSEHPIG 577
>SPBC32H8.10 |cdk9||cyclin-dependent protein kinase Cdk9
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 591
Score = 26.6 bits (56), Expect = 3.1
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 109 STSLLTMPHWEKLLLS*EVTSLPRHVKT 192
S + TMP+WEKL V S P H +T
Sbjct: 273 SPTQATMPNWEKLPGCEGVRSFPSHPRT 300
>SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr
1|||Manual
Length = 654
Score = 26.2 bits (55), Expect = 4.1
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = -2
Query: 505 LTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCL 356
LT +P TTF T +P + +V ++++ PL+ + P PV L
Sbjct: 37 LTEQLP-TTFRITASIPHATQVRDYFIEHYYPLIENARTEDAKIPLPVSL 85
>SPCC553.01c ||SPCC736.01c|meiotic chromosome segregation
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 715
Score = 25.8 bits (54), Expect = 5.4
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Frame = +1
Query: 145 LLLS*EVTSLPRHVKTSVPCALARKASVTRAPFSIVSSPISCY-----KEGTSPTITALG 309
++ S E +SLP++ K+ R SV +PF++ S +S K+G P
Sbjct: 550 IISSGEHSSLPKNSKS-------RNVSVFSSPFNVPSFTVSSSDQVQKKKGNVPNAIETD 602
Query: 310 ESPSTAISS 336
SPS ISS
Sbjct: 603 SSPSDTISS 611
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 25.8 bits (54), Expect = 5.4
Identities = 22/66 (33%), Positives = 34/66 (51%)
Frame = +1
Query: 166 TSLPRHVKTSVPCALARKASVTRAPFSIVSSPISCYKEGTSPTITALGESPSTAISSRTR 345
TSL +S+P + + A+ T S+ SS + S + + L S +TAISS +
Sbjct: 12 TSLSSSASSSIPASSSSAAAST----SLSSSSVI-----PSSSSSMLSSSSATAISSSSS 62
Query: 346 ISPLST 363
SPLS+
Sbjct: 63 SSPLSS 68
>SPAP7G5.06 |||amino acid permease, unknown 4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 583
Score = 25.8 bits (54), Expect = 5.4
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +3
Query: 282 DFTNHNGTGGKSIYGNKFEDEN-FTLKHTGPGVLSMANAGADTNGSQFFI 428
D + T KS+YG +D+N F + T V+ ADT Q F+
Sbjct: 11 DLEKYPSTATKSVYGQSKDDKNVFDIHPTESEVIPGEVEYADTPSHQNFL 60
>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 530
Score = 25.8 bits (54), Expect = 5.4
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = -2
Query: 523 PKVSICLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKF 344
P S + +S +++ T+ P+S EV T P+ S+ A + E + G V
Sbjct: 162 PASSTEVASSYSASSTEVTSSYPASSEVATSTSSYVAPVSSSVASSSEISAGSATSYVPT 221
Query: 343 SSSNL 329
SSS++
Sbjct: 222 SSSSI 226
>SPBC56F2.11 |met6||homoserine
O-acetyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 489
Score = 25.4 bits (53), Expect = 7.1
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 268 CYKEGTSPTITALGESPSTAISSRTRISPLSTLD 369
C G+SPT + SP++++SS + T D
Sbjct: 290 CRSNGSSPTSESALNSPASSVSSLPSLGASQTTD 323
>SPCC1840.03 |sal3|pse1|karyopherin Sal3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1095
Score = 25.0 bits (52), Expect = 9.4
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +1
Query: 241 FSIVSSPISCYKEGTSPTITALGESPSTAISSRTRISPLSTLDLA 375
F+ V+SP ++E TIT+L P + ++PL T LA
Sbjct: 145 FNAVNSPDESFRESVFRTITSL---PRLLSGQDSAVTPLFTTGLA 186
>SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 867
Score = 25.0 bits (52), Expect = 9.4
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 9/54 (16%)
Frame = -2
Query: 235 PL*PKPFSPVH---RAR-----KFSHVL-GVTSLLSSITIFPSGASSTVTSKNT 101
P PKP +PV+ R + S+VL +TS SS+T PS + +T+ S T
Sbjct: 312 PSPPKPNNPVYLPPRGNPTVNDRVSNVLPSITSFDSSVTTVPSNSPATLNSYTT 365
>SPAC23D3.13c |||guanyl-nucleotide exchange factor|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1616
Score = 25.0 bits (52), Expect = 9.4
Identities = 10/22 (45%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = +3
Query: 141 KIVIELRSDVTPKTC-ENFRAL 203
++++ L SD+ PK C NF+AL
Sbjct: 1135 QLMLRLHSDIYPKICISNFKAL 1156
>SPCC24B10.17 |emp24||COPII-coated vesicle component Emp24
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 199
Score = 25.0 bits (52), Expect = 9.4
Identities = 14/59 (23%), Positives = 25/59 (42%)
Frame = +3
Query: 234 GSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTN 410
G I H+ +PN M Q + G Y + + E+ + GV+ +++ D N
Sbjct: 67 GQIMHQEVPNSMAQYSFTVKNPGKYMYCFYNDALDGESKEVLFNVHGVIYISDEDLDAN 125
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 25.0 bits (52), Expect = 9.4
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -1
Query: 221 AFLASAQGTEVFTCLGSDVTSQLNNNFSQ 135
A+ ++ GTE DVT QL NNFSQ
Sbjct: 607 AYDMNSSGTENLDAT-PDVTGQLPNNFSQ 634
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,829,275
Number of Sequences: 5004
Number of extensions: 63311
Number of successful extensions: 210
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 196
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 291768710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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