Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_F01
         (664 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC034718-1|AAH34718.1|  633|Homo sapiens EPB41L2 protein protein.      34   0.52 
AY047584-1|AAK95850.1| 1005|Homo sapiens protein 4.1G protein.         34   0.52 
AL590014-3|CAI40761.1| 1005|Homo sapiens erythrocyte membrane pr...    34   0.52 
AL358943-1|CAI20310.1| 1005|Homo sapiens erythrocyte membrane pr...    34   0.52 
AF027299-1|AAC16923.1| 1005|Homo sapiens protein 4.1-G protein.        34   0.52 
AB209522-1|BAD92759.1|  676|Homo sapiens EPB41L2 protein variant...    34   0.52 
X15306-1|CAA33366.1| 1020|Homo sapiens heavy neurofilament subun...    31   2.8  
BC073969-1|AAH73969.1| 1026|Homo sapiens NEFH protein protein.         31   2.8  
BC008648-1|AAH08648.1|  358|Homo sapiens Unknown (protein for IM...    31   2.8  
AF203032-1|AAF13722.1| 1026|Homo sapiens neurofilament protein p...    31   2.8  
AB020652-1|BAA74868.2| 1034|Homo sapiens KIAA0845 protein protein.     31   2.8  
AK001985-1|BAA92020.1|  531|Homo sapiens protein ( Homo sapiens ...    31   3.7  
BC013402-1|AAH13402.1|  531|Homo sapiens Paf1, RNA polymerase II...    31   4.9  
BC000017-1|AAH00017.1|  531|Homo sapiens Paf1, RNA polymerase II...    31   4.9  
AJ401156-1|CAC20564.1|  531|Homo sapiens PD2 protein protein.          31   4.9  
AC005239-1|AAC25503.1|  510|Homo sapiens F23149_1 protein.             31   4.9  
AL136164-1|CAI20223.1|  451|Homo sapiens protein ( Human DNA seq...    30   8.5  
AK024732-1|BAB14980.1|  252|Homo sapiens protein ( Homo sapiens ...    30   8.5  

>BC034718-1|AAH34718.1|  633|Homo sapiens EPB41L2 protein protein.
          Length = 633

 Score = 33.9 bits (74), Expect = 0.52
 Identities = 18/50 (36%), Positives = 27/50 (54%)
 Frame = +3

Query: 417 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAE 566
           K   +P+ E + A    EE A + ++ K EV+     +SKEEKPS +  E
Sbjct: 114 KEEPLPE-EQRQAKGDAEEMAQKKQEIKVEVKEEKPSVSKEEKPSVSKVE 162


>AY047584-1|AAK95850.1| 1005|Homo sapiens protein 4.1G protein.
          Length = 1005

 Score = 33.9 bits (74), Expect = 0.52
 Identities = 18/50 (36%), Positives = 27/50 (54%)
 Frame = +3

Query: 417 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAE 566
           K   +P+ E + A    EE A + ++ K EV+     +SKEEKPS +  E
Sbjct: 114 KEEPLPE-EQRQAKGDAEEMAQKKQEIKVEVKEEKPSVSKEEKPSVSKVE 162


>AL590014-3|CAI40761.1| 1005|Homo sapiens erythrocyte membrane
           protein band 4.1-like 2 protein.
          Length = 1005

 Score = 33.9 bits (74), Expect = 0.52
 Identities = 18/50 (36%), Positives = 27/50 (54%)
 Frame = +3

Query: 417 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAE 566
           K   +P+ E + A    EE A + ++ K EV+     +SKEEKPS +  E
Sbjct: 114 KEEPLPE-EQRQAKGDAEEMAQKKQEIKVEVKEEKPSVSKEEKPSVSKVE 162


>AL358943-1|CAI20310.1| 1005|Homo sapiens erythrocyte membrane
           protein band 4.1-like 2 protein.
          Length = 1005

 Score = 33.9 bits (74), Expect = 0.52
 Identities = 18/50 (36%), Positives = 27/50 (54%)
 Frame = +3

Query: 417 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAE 566
           K   +P+ E + A    EE A + ++ K EV+     +SKEEKPS +  E
Sbjct: 114 KEEPLPE-EQRQAKGDAEEMAQKKQEIKVEVKEEKPSVSKEEKPSVSKVE 162


>AF027299-1|AAC16923.1| 1005|Homo sapiens protein 4.1-G protein.
          Length = 1005

 Score = 33.9 bits (74), Expect = 0.52
 Identities = 18/50 (36%), Positives = 27/50 (54%)
 Frame = +3

Query: 417 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAE 566
           K   +P+ E + A    EE A + ++ K EV+     +SKEEKPS +  E
Sbjct: 114 KEEPLPE-EQRQAKGDAEEMAQKKQEIKVEVKEEKPSVSKEEKPSVSKVE 162


>AB209522-1|BAD92759.1|  676|Homo sapiens EPB41L2 protein variant
           protein.
          Length = 676

 Score = 33.9 bits (74), Expect = 0.52
 Identities = 18/50 (36%), Positives = 27/50 (54%)
 Frame = +3

Query: 417 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAE 566
           K   +P+ E + A    EE A + ++ K EV+     +SKEEKPS +  E
Sbjct: 117 KEEPLPE-EQRQAKGDAEEMAQKKQEIKVEVKEEKPSVSKEEKPSVSKVE 165


>X15306-1|CAA33366.1| 1020|Homo sapiens heavy neurofilament subunit
            protein.
          Length = 1020

 Score = 31.5 bits (68), Expect = 2.8
 Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
 Frame = +3

Query: 303  EVPAIPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIKVEEPAA 482
            E PA  E K+D    E +++A                +K +E  +A  +  D K EE A 
Sbjct: 909  EAPAKVEVKEDAKPKEKTEVAKKEPDDAKAKEP----SKPAEKKEAAPEKKDTK-EEKAK 963

Query: 483  QPEDS-KTEVQATVAE--ISKE-EKPSATDAEGSADS 581
            +PE+  KTE +A   +  +SKE  KP A  AE S+ +
Sbjct: 964  KPEEKPKTEAKAKEDDKTLSKEPSKPKAEKAEKSSST 1000


>BC073969-1|AAH73969.1| 1026|Homo sapiens NEFH protein protein.
          Length = 1026

 Score = 31.5 bits (68), Expect = 2.8
 Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
 Frame = +3

Query: 303  EVPAIPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIKVEEPAA 482
            E PA  E K+D    E +++A                +K +E  +A  +  D K EE A 
Sbjct: 915  EAPAKVEVKEDAKPKEKTEVAKKEPDDAKAKEP----SKPAEKKEAAPEKKDTK-EEKAK 969

Query: 483  QPEDS-KTEVQATVAE--ISKE-EKPSATDAEGSADS 581
            +PE+  KTE +A   +  +SKE  KP A  AE S+ +
Sbjct: 970  KPEEKPKTEAKAKEDDKTLSKEPSKPKAEKAEKSSST 1006


>BC008648-1|AAH08648.1|  358|Homo sapiens Unknown (protein for
           IMAGE:3866238) protein.
          Length = 358

 Score = 31.5 bits (68), Expect = 2.8
 Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
 Frame = +3

Query: 303 EVPAIPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIKVEEPAA 482
           E PA  E K+D    E +++A                +K +E  +A  +  D K EE A 
Sbjct: 247 EAPAKVEVKEDAKPKEKTEVAKKEPDDAKAKEP----SKPAEKKEAAPEKKDTK-EEKAK 301

Query: 483 QPEDS-KTEVQATVAE--ISKE-EKPSATDAEGSADS 581
           +PE+  KTE +A   +  +SKE  KP A  AE S+ +
Sbjct: 302 KPEEKPKTEAKAKEDDKTLSKEPSKPKAEKAEKSSST 338


>AF203032-1|AAF13722.1| 1026|Homo sapiens neurofilament protein
            protein.
          Length = 1026

 Score = 31.5 bits (68), Expect = 2.8
 Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
 Frame = +3

Query: 303  EVPAIPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIKVEEPAA 482
            E PA  E K+D    E +++A                +K +E  +A  +  D K EE A 
Sbjct: 915  EAPAKVEVKEDAKPKEKTEVAKKEPDDAKAKEP----SKPAEKKEAAPEKKDTK-EEKAK 969

Query: 483  QPEDS-KTEVQATVAE--ISKE-EKPSATDAEGSADS 581
            +PE+  KTE +A   +  +SKE  KP A  AE S+ +
Sbjct: 970  KPEEKPKTEAKAKEDDKTLSKEPSKPKAEKAEKSSST 1006


>AB020652-1|BAA74868.2| 1034|Homo sapiens KIAA0845 protein protein.
          Length = 1034

 Score = 31.5 bits (68), Expect = 2.8
 Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
 Frame = +3

Query: 303  EVPAIPEAKKDDIAPEDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIKVEEPAA 482
            E PA  E K+D    E +++A                +K +E  +A  +  D K EE A 
Sbjct: 923  EAPAKVEVKEDAKPKEKTEVAKKEPDDAKAKEP----SKPAEKKEAAPEKKDTK-EEKAK 977

Query: 483  QPEDS-KTEVQATVAE--ISKE-EKPSATDAEGSADS 581
            +PE+  KTE +A   +  +SKE  KP A  AE S+ +
Sbjct: 978  KPEEKPKTEAKAKEDDKTLSKEPSKPKAEKAEKSSST 1014


>AK001985-1|BAA92020.1|  531|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11123 fis, clone PLACE1006167. ).
          Length = 531

 Score = 31.1 bits (67), Expect = 3.7
 Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +3

Query: 426 EIPDAEAKSADIKVEEPAAQPEDS-KTEVQATVAEISKEEKPSATDAEGSAD 578
           E+   EA+ A ++  EP  + E+  +TE +       ++EK S+++ EGS D
Sbjct: 360 ELEAQEARKAQLENHEPEGEEEEEMETEEKEAGGSDEEQEKGSSSEKEGSED 411


>BC013402-1|AAH13402.1|  531|Homo sapiens Paf1, RNA polymerase II
           associated factor, homolog (S. cerevisiae) protein.
          Length = 531

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +3

Query: 426 EIPDAEAKSADIKVEEPAAQPEDS-KTEVQATVAEISKEEKPSATDAEGSAD 578
           E+   EA+ A ++  EP  + E+  +TE +       ++EK S+++ EGS D
Sbjct: 360 ELEAQEARKAQLENHEPEEEEEEEMETEEKEAGGSDEEQEKGSSSEKEGSED 411


>BC000017-1|AAH00017.1|  531|Homo sapiens Paf1, RNA polymerase II
           associated factor, homolog (S. cerevisiae) protein.
          Length = 531

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +3

Query: 426 EIPDAEAKSADIKVEEPAAQPEDS-KTEVQATVAEISKEEKPSATDAEGSAD 578
           E+   EA+ A ++  EP  + E+  +TE +       ++EK S+++ EGS D
Sbjct: 360 ELEAQEARKAQLENHEPEEEEEEEMETEEKEAGGSDEEQEKGSSSEKEGSED 411


>AJ401156-1|CAC20564.1|  531|Homo sapiens PD2 protein protein.
          Length = 531

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +3

Query: 426 EIPDAEAKSADIKVEEPAAQPEDS-KTEVQATVAEISKEEKPSATDAEGSAD 578
           E+   EA+ A ++  EP  + E+  +TE +       ++EK S+++ EGS D
Sbjct: 360 ELEAQEARKAQLENHEPEEEEEEEMETEEKEAGGSDEEQEKGSSSEKEGSED 411


>AC005239-1|AAC25503.1|  510|Homo sapiens F23149_1 protein.
          Length = 510

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +3

Query: 426 EIPDAEAKSADIKVEEPAAQPEDS-KTEVQATVAEISKEEKPSATDAEGSAD 578
           E+   EA+ A ++  EP  + E+  +TE +       ++EK S+++ EGS D
Sbjct: 339 ELEAQEARKAQLENHEPEEEEEEEMETEEKEAGGSDEEQEKGSSSEKEGSED 390


>AL136164-1|CAI20223.1|  451|Homo sapiens protein ( Human DNA
           sequence from clone RP3-331H24 on chromosome 6 Contains 
           the 5' end of a novel gene, the gene for a novel protein
           similar to  ).
          Length = 451

 Score = 29.9 bits (64), Expect = 8.5
 Identities = 17/74 (22%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
 Frame = +3

Query: 141 AAVSLAMPVAEEKDVVPAQPILEV-APKIDDSXXXXXXXXXXXXXXXXXXXXSNDEVPAI 317
           +AV L    AE+K V P +P+ E   P  + S                      ++    
Sbjct: 354 SAVHLNSKTAEDKKVAPKEPVEETDRPSPEPSNEAAKPRNTEKDSNAENMNSQPEKTVTT 413

Query: 318 PEAKKDDIAPEDSD 359
           P  KK+ ++PE+++
Sbjct: 414 PTEKKESVSPENNE 427


>AK024732-1|BAB14980.1|  252|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ21079 fis, clone CAS02253. ).
          Length = 252

 Score = 29.9 bits (64), Expect = 8.5
 Identities = 17/74 (22%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
 Frame = +3

Query: 141 AAVSLAMPVAEEKDVVPAQPILEV-APKIDDSXXXXXXXXXXXXXXXXXXXXSNDEVPAI 317
           +AV L    AE+K V P +P+ E   P  + S                      ++    
Sbjct: 155 SAVHLNSKTAEDKKVAPKEPVEETDRPSPEPSNEAAKPRNTEKDSNAENMNSQPEKTVTT 214

Query: 318 PEAKKDDIAPEDSD 359
           P  KK+ ++PE+++
Sbjct: 215 PTEKKESVSPENNE 228


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,614,456
Number of Sequences: 237096
Number of extensions: 1103258
Number of successful extensions: 2999
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2984
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7478817430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)