Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_E24
(577 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62913 Cluster: 60S ribosomal protein L11; n=156; Eukar... 282 5e-75
UniRef50_P0C0W9 Cluster: 60S ribosomal protein L11-A; n=25; Euka... 238 6e-62
UniRef50_P42794 Cluster: 60S ribosomal protein L11-2; n=38; Euka... 234 1e-60
UniRef50_UPI000155375A Cluster: PREDICTED: similar to ribosomal ... 212 6e-54
UniRef50_A0DI11 Cluster: Chromosome undetermined scaffold_51, wh... 186 4e-46
UniRef50_UPI00015BB1AB Cluster: LSU ribosomal protein L5P; n=1; ... 149 5e-35
UniRef50_Q9YF87 Cluster: 50S ribosomal protein L5P; n=20; Archae... 146 4e-34
UniRef50_O28367 Cluster: 50S ribosomal protein L5P; n=1; Archaeo... 136 3e-31
UniRef50_Q74N79 Cluster: 50S ribosomal protein L5P; n=1; Nanoarc... 131 1e-29
UniRef50_A3H987 Cluster: Ribosomal protein L5; n=1; Caldivirga m... 130 3e-29
UniRef50_Q6LXE0 Cluster: 50S ribosomal protein L5P; n=7; Euryarc... 126 3e-28
UniRef50_Q46GA8 Cluster: 50S ribosomal protein L5P; n=3; Methano... 126 5e-28
UniRef50_Q8PV37 Cluster: 50S ribosomal protein L5P; n=6; Methano... 124 2e-27
UniRef50_A5UL75 Cluster: Ribosomal protein L5p; n=1; Methanobrev... 123 3e-27
UniRef50_A7DSY1 Cluster: Ribosomal protein L5; n=1; Candidatus N... 121 1e-26
UniRef50_A0RVY6 Cluster: Ribosomal protein L5; n=1; Cenarchaeum ... 118 7e-26
UniRef50_Q673R5 Cluster: Ribosomal protein L5/L11; n=2; environm... 116 5e-25
UniRef50_Q6L1B4 Cluster: 50S ribosomal protein L5P; n=4; Thermop... 112 6e-24
UniRef50_P14124 Cluster: 50S ribosomal protein L5P; n=5; Halobac... 111 1e-23
UniRef50_Q6CKT5 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 107 1e-22
UniRef50_Q3LWF5 Cluster: Ribosomal protein L11; n=1; Bigelowiell... 103 4e-21
UniRef50_Q01C63 Cluster: Chromosome 03 contig 1, DNA sequence; n... 82 1e-14
UniRef50_Q9HWE7 Cluster: 50S ribosomal protein L5; n=187; Bacter... 66 6e-10
UniRef50_Q7R5U0 Cluster: GLP_81_173473_174138; n=1; Giardia lamb... 62 7e-09
UniRef50_Q7VQD6 Cluster: 50S ribosomal protein L5; n=4; Bacteria... 62 7e-09
UniRef50_P38517 Cluster: 50S ribosomal protein L5; n=18; cellula... 60 4e-08
UniRef50_A6PPX3 Cluster: 50S ribosomal protein L5; n=1; Victival... 59 8e-08
UniRef50_Q6A6N8 Cluster: 50S ribosomal protein L5; n=125; Bacter... 58 1e-07
UniRef50_Q4FLN0 Cluster: 50S ribosomal protein L5; n=3; Bacteria... 57 3e-07
UniRef50_Q6AP59 Cluster: 50S ribosomal protein L5; n=77; Bacteri... 53 6e-06
UniRef50_Q6YR10 Cluster: 50S ribosomal protein L5; n=22; Bacteri... 51 2e-05
UniRef50_Q1ACG2 Cluster: Chloroplast 50S ribosomal protein L5; n... 51 2e-05
UniRef50_Q6B8W5 Cluster: Chloroplast 50S ribosomal protein L5; n... 50 3e-05
UniRef50_A5CCK0 Cluster: 50S ribosomal protein L5; n=1; Orientia... 50 4e-05
UniRef50_P73308 Cluster: 50S ribosomal protein L5; n=227; cellul... 50 4e-05
UniRef50_Q9G893 Cluster: Ribosomal protein L5; n=1; Malawimonas ... 50 5e-05
UniRef50_A5KRR2 Cluster: 50S ribosomal protein L5; n=1; candidat... 49 9e-05
UniRef50_O04603 Cluster: 50S ribosomal protein L5, chloroplast p... 48 1e-04
UniRef50_Q2GEC7 Cluster: 50S ribosomal protein L5; n=1; Neoricke... 46 6e-04
UniRef50_Q30TV2 Cluster: 50S ribosomal protein L5; n=2; Epsilonp... 46 8e-04
UniRef50_P56033 Cluster: 50S ribosomal protein L5; n=6; Bacteria... 45 0.001
UniRef50_O21252 Cluster: Mitochondrial 60S ribosomal protein L5;... 44 0.002
UniRef50_A3GUR6 Cluster: 50S ribosomal protein L5; n=1; Vibrio c... 44 0.003
UniRef50_Q6KI43 Cluster: 50S ribosomal protein L5; n=12; Bacteri... 44 0.003
UniRef50_P49547 Cluster: Chloroplast 50S ribosomal protein L5; n... 43 0.005
UniRef50_Q2EEW3 Cluster: Ribosomal protein L5; n=1; Helicosporid... 42 0.008
UniRef50_A7CZB2 Cluster: Ribosomal protein L5; n=1; Opitutaceae ... 41 0.018
UniRef50_A7P1Q7 Cluster: Chromosome chr19 scaffold_4, whole geno... 40 0.032
UniRef50_P46749 Cluster: Mitochondrial 60S ribosomal protein L5;... 38 0.17
UniRef50_Q9MAT2 Cluster: F13M7.17; n=1; Arabidopsis thaliana|Rep... 37 0.39
UniRef50_Q9G4D4 Cluster: Ribosomal protein L5; n=1; Thraustochyt... 35 1.2
UniRef50_A1RXI7 Cluster: Methyltransferase type 11; n=1; Thermof... 35 1.2
UniRef50_UPI0000D55752 Cluster: PREDICTED: similar to CG1964-PA;... 34 2.8
UniRef50_Q5DZU7 Cluster: Putative uncharacterized protein; n=1; ... 34 2.8
UniRef50_Q589Y5 Cluster: Serine protease; n=3; Obtectomera|Rep: ... 34 2.8
UniRef50_Q1MDG2 Cluster: Conserved hypothetical exported protein... 33 6.4
UniRef50_A0RPV7 Cluster: Wbgx protein; n=3; Campylobacter|Rep: W... 33 6.4
UniRef50_Q2R3R6 Cluster: Transposon protein, putative, Pong sub-... 33 6.4
UniRef50_A7A6S7 Cluster: Putative uncharacterized protein; n=1; ... 32 8.4
UniRef50_O15026 Cluster: KIAA0309 protein; n=17; Eutheria|Rep: K... 32 8.4
>UniRef50_P62913 Cluster: 60S ribosomal protein L11; n=156;
Eukaryota|Rep: 60S ribosomal protein L11 - Homo sapiens
(Human)
Length = 178
Score = 282 bits (691), Expect = 5e-75
Identities = 132/154 (85%), Positives = 142/154 (92%)
Frame = +3
Query: 114 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIA 293
N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKIA
Sbjct: 10 NPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIA 69
Query: 294 VHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLD 473
VHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGLD
Sbjct: 70 VHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLD 129
Query: 474 FYVVLGRPGFNVXHXRRKTGKVGFPHRLTKEXAM 575
FYVVLGRPGF++ +R+TG +G HR++KE AM
Sbjct: 130 FYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAM 163
>UniRef50_P0C0W9 Cluster: 60S ribosomal protein L11-A; n=25;
Eukaryota|Rep: 60S ribosomal protein L11-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 174
Score = 238 bits (583), Expect = 6e-62
Identities = 116/151 (76%), Positives = 127/151 (84%)
Frame = +3
Query: 114 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIA 293
N MR+L I KL LNI VGESGDRLTRA+KVLEQL+GQ PV SKARYTVR+FGIRRNEKIA
Sbjct: 7 NPMRDLKIEKLVLNISVGESGDRLTRASKVLEQLSGQTPVQSKARYTVRTFGIRRNEKIA 66
Query: 294 VHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLD 473
VH TVRG KAEEILERGLKV+EY+LR NFSATGNFGFGI EHIDLGIKYDPSIGI+G+D
Sbjct: 67 VHVTVRGPKAEEILERGLKVKEYQLRDRNFSATGNFGFGIDEHIDLGIKYDPSIGIFGMD 126
Query: 474 FYVVLGRPGFNVXHXRRKTGKVGFPHRLTKE 566
FYVV+ RPG V +R G VG H+ TKE
Sbjct: 127 FYVVMNRPGARVTRRKRCKGTVGNSHKTTKE 157
>UniRef50_P42794 Cluster: 60S ribosomal protein L11-2; n=38;
Eukaryota|Rep: 60S ribosomal protein L11-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 182
Score = 234 bits (572), Expect = 1e-60
Identities = 113/154 (73%), Positives = 128/154 (83%)
Frame = +3
Query: 114 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIA 293
N MR++ ++KL LNI VGESGDRLTRA+KVLEQL+GQ PVFSKARYTVRSFGIRRNEKIA
Sbjct: 9 NPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIA 68
Query: 294 VHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLD 473
+ TVRG KA ++LE GLKV+EYEL R NFS TG FGFGIQEHIDLGIKYDPS GIYG+D
Sbjct: 69 CYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMD 128
Query: 474 FYVVLGRPGFNVXHXRRKTGKVGFPHRLTKEXAM 575
FYVVL RPG+ V RR +VG HR+TK+ AM
Sbjct: 129 FYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAM 162
>UniRef50_UPI000155375A Cluster: PREDICTED: similar to ribosomal
protein L11; n=1; Mus musculus|Rep: PREDICTED: similar
to ribosomal protein L11 - Mus musculus
Length = 279
Score = 212 bits (517), Expect = 6e-54
Identities = 98/120 (81%), Positives = 109/120 (90%)
Frame = +3
Query: 216 TGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATG 395
+GQ PV SKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILE+GLKVREYELR++NFS TG
Sbjct: 98 SGQAPVESKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTG 157
Query: 396 NFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVXHXRRKTGKVGFPHRLTKEXAM 575
NFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGR GF++ +R+TG +G HR++KE AM
Sbjct: 158 NFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRSGFSIADKKRRTGCIGAKHRISKEEAM 217
>UniRef50_A0DI11 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_51,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 197
Score = 186 bits (452), Expect = 4e-46
Identities = 90/129 (69%), Positives = 106/129 (82%), Gaps = 2/129 (1%)
Frame = +3
Query: 114 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIA 293
NVMR + I KL ++IC GESGD+LT+AAKVLE LTGQ+PVF KARYTVRSFGIRRNEKI+
Sbjct: 37 NVMRKIRIEKLMVHICAGESGDKLTKAAKVLEDLTGQKPVFGKARYTVRSFGIRRNEKIS 96
Query: 294 VHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGI--YG 467
V CT+RG +A +IL RGL+V+E EL++ NFS +GNFGFGIQEHIDLG+KYDP GI YG
Sbjct: 97 VFCTIRGDQARDILVRGLRVKEMELKKRNFSESGNFGFGIQEHIDLGLKYDPYTGIFRYG 156
Query: 468 LDFYVVLGR 494
L VV R
Sbjct: 157 LLCCVVKTR 165
>UniRef50_UPI00015BB1AB Cluster: LSU ribosomal protein L5P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L5P - Ignicoccus hospitalis KIN4/I
Length = 198
Score = 149 bits (361), Expect = 5e-35
Identities = 69/148 (46%), Positives = 102/148 (68%), Gaps = 1/148 (0%)
Frame = +3
Query: 135 IRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRG 314
+ K+ +NI +GESG+RL +A +LE+LTGQ+PV KA+ T+R FGIRR E IAV T+RG
Sbjct: 38 LAKVTVNIALGESGERLEKAYNLLEELTGQRPVKRKAKKTIRQFGIRRGENIAVMVTLRG 97
Query: 315 AKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVVLG 491
+A E L++ L+ ++++ +F GN GFGI+EHI + G +YDP +GI+G+D + +
Sbjct: 98 QRAVEFLKKALEAVGWKIKASSFDEFGNVGFGIREHIQIPGTRYDPRVGIFGMDVILTIE 157
Query: 492 RPGFNVXHXRRKTGKVGFPHRLTKEXAM 575
RPG+ V RR K+ HR+TKE +M
Sbjct: 158 RPGYRVARRRRARSKIPRRHRVTKEESM 185
>UniRef50_Q9YF87 Cluster: 50S ribosomal protein L5P; n=20;
Archaea|Rep: 50S ribosomal protein L5P - Aeropyrum
pernix
Length = 192
Score = 146 bits (353), Expect = 4e-34
Identities = 71/154 (46%), Positives = 102/154 (66%), Gaps = 2/154 (1%)
Frame = +3
Query: 120 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 299
MR I K+ +NI +G+SG+RL RAA+VLE+LTGQ+PVF KA+ T+R+FG+R+ E IAV
Sbjct: 27 MRRPRIVKVTVNISIGQSGERLQRAAEVLEELTGQKPVFRKAKRTIRAFGVRKGENIAVM 86
Query: 300 CTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDF 476
T+RG KA L+R L + ++ + GN FGI+EHI + G+KYDP +GI G+D
Sbjct: 87 VTLRGEKALNFLKRALDAVGHRIKTSSIDEHGNVSFGIEEHILIPGVKYDPRVGILGMDV 146
Query: 477 YVVLGRPGFNVXHXRR-KTGKVGFPHRLTKEXAM 575
+ + RPG + RR + G + HR+T+E M
Sbjct: 147 AITIQRPGHRIVERRRQRRGHIPRRHRVTREETM 180
>UniRef50_O28367 Cluster: 50S ribosomal protein L5P; n=1;
Archaeoglobus fulgidus|Rep: 50S ribosomal protein L5P -
Archaeoglobus fulgidus
Length = 178
Score = 136 bits (329), Expect = 3e-31
Identities = 69/152 (45%), Positives = 97/152 (63%), Gaps = 1/152 (0%)
Frame = +3
Query: 114 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIA 293
N MR + + K+ +NI VGESG+R +A +LE+L Q+P + A+ T+++FGIR+ E I
Sbjct: 14 NPMREVVLDKVVINIGVGESGERHKKAYSLLEELVEQKPAITYAKMTIKNFGIRKGEAIG 73
Query: 294 VHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGL 470
+ T+RG KA + L+ L V+E L R + G F FGI EHIDL G+ YDP +GI+G+
Sbjct: 74 IKVTLRGEKALKFLKDALTVKENRLSRKSI-GEGYFAFGIAEHIDLPGVDYDPDVGIFGM 132
Query: 471 DFYVVLGRPGFNVXHXRRKTGKVGFPHRLTKE 566
D V L R G+ V RRK K+ HR+TKE
Sbjct: 133 DVCVSLKRRGYRVARRRRKKAKIATSHRVTKE 164
>UniRef50_Q74N79 Cluster: 50S ribosomal protein L5P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L5P -
Nanoarchaeum equitans
Length = 169
Score = 131 bits (317), Expect = 1e-29
Identities = 71/151 (47%), Positives = 101/151 (66%), Gaps = 2/151 (1%)
Frame = +3
Query: 120 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 299
MR + I K+ LNI VGESG++L +A ++L++LTGQ+PV +KA+ V + IR I V
Sbjct: 5 MRKIRIEKVTLNIGVGESGEKLDKAYELLKRLTGQKPVKTKAKVRVEQWHIRPGLPIGVK 64
Query: 300 CTVRGAKAEEIL-ERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLD 473
T+RG KA +IL E+ L +++++ +F+ G FGFGI E+I + G+KYDP +G+ GL+
Sbjct: 65 VTLRGEKAYKILKEKLLPAVDFKIKASSFTDRG-FGFGIPEYIMIPGMKYDPELGLIGLE 123
Query: 474 FYVVLGRPGFNVXHXRRKTGKVGFPHRLTKE 566
YV L RPG+ V R K KVG HRL KE
Sbjct: 124 AYVTLERPGYRVERRRIKRSKVGSRHRLNKE 154
>UniRef50_A3H987 Cluster: Ribosomal protein L5; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L5 -
Caldivirga maquilingensis IC-167
Length = 197
Score = 130 bits (313), Expect = 3e-29
Identities = 65/150 (43%), Positives = 98/150 (65%), Gaps = 1/150 (0%)
Frame = +3
Query: 120 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 299
MR + I + +N+ +G+SG+RL +AAKV+ +LTG+ P + A +++ FGIRR E I +
Sbjct: 32 MRRIFIWSVAVNMGIGQSGERLEKAAKVMSELTGRTPSYRLAHKSIKDFGIRRGEPIGLL 91
Query: 300 CTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDF 476
T+R +A L R L ++ LR ++F+A GN FGI+EHI + G +YDP++GI+G D
Sbjct: 92 VTLRRNEAVWFLLRALAAVDFTLREESFNA-GNVSFGIREHILVPGSRYDPALGIFGFDV 150
Query: 477 YVVLGRPGFNVXHXRRKTGKVGFPHRLTKE 566
V L RPGF V + RR VG HR+++E
Sbjct: 151 AVTLARPGFRVQYRRRARADVGKDHRVSRE 180
>UniRef50_Q6LXE0 Cluster: 50S ribosomal protein L5P; n=7;
Euryarchaeota|Rep: 50S ribosomal protein L5P -
Methanococcus maripaludis
Length = 181
Score = 126 bits (305), Expect = 3e-28
Identities = 68/156 (43%), Positives = 93/156 (59%), Gaps = 4/156 (2%)
Frame = +3
Query: 120 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 299
M+ I+K+ +N VGE+GDRLT AKV+E+LTGQ PV + A+ T +FGIR+ I +
Sbjct: 12 MKKPRIQKVTVNFGVGEAGDRLTIGAKVIEELTGQSPVRTLAKQTNPAFGIRKKLPIGLK 71
Query: 300 CTVRGAKAEEILER---GLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYG 467
T+RG KAEE L+ K L +F GNF FG+ EHID G KYDPS+GIYG
Sbjct: 72 VTLRGKKAEEFLKNAFTAFKACGKTLFASSFDQVGNFSFGVPEHIDFPGQKYDPSVGIYG 131
Query: 468 LDFYVVLGRPGFNVXHXRRKTGKVGFPHRLTKEXAM 575
+D V + G+ V + K + H +TK+ A+
Sbjct: 132 MDICVTFEKSGYRVKSRKVKRSHIPEKHLVTKDEAI 167
>UniRef50_Q46GA8 Cluster: 50S ribosomal protein L5P; n=3;
Methanomicrobia|Rep: 50S ribosomal protein L5P -
Methanosarcina barkeri (strain Fusaro / DSM 804)
Length = 169
Score = 126 bits (303), Expect = 5e-28
Identities = 63/155 (40%), Positives = 96/155 (61%), Gaps = 1/155 (0%)
Frame = +3
Query: 114 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIA 293
NVMR + K+ +++ VGESG L A ++L +TGQ+ V A+ T+ +F I++NE I
Sbjct: 3 NVMRTPVVEKVIVHMGVGESGQHLVDAEEILRNITGQEVVRCFAKRTLPAFSIKKNEPIG 62
Query: 294 VHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGL 470
T+RG +A++ LE L + + L R F + GN FGI+EH D G+KYDP+IG++G+
Sbjct: 63 CKVTLRGQRAQQFLETALGIVDKTLVRSQFDSLGNVSFGIEEHTDFPGMKYDPNIGVFGM 122
Query: 471 DFYVVLGRPGFNVXHXRRKTGKVGFPHRLTKEXAM 575
D VV+ RPG + R T K+ HR+T E ++
Sbjct: 123 DVTVVIKRPGERICKRRIATRKIPTNHRVTLEDSI 157
>UniRef50_Q8PV37 Cluster: 50S ribosomal protein L5P; n=6;
Methanomicrobia|Rep: 50S ribosomal protein L5P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 169
Score = 124 bits (298), Expect = 2e-27
Identities = 62/155 (40%), Positives = 95/155 (61%), Gaps = 1/155 (0%)
Frame = +3
Query: 114 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIA 293
N MR + K+ +++ VGESG L A ++L+ +TGQ+ V A+ T+ +F I++NE I
Sbjct: 3 NPMRTPMVEKVIVHMGVGESGQHLVNAEEILKTITGQEVVRCFAKRTLPAFSIKKNEPIG 62
Query: 294 VHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGL 470
T+RG +A+E L ++ E L R F + GN FGI+EH D G++YDP+IG++G+
Sbjct: 63 CKVTLRGQRAQEFLGTSFEIIEKTLSRAQFDSLGNVSFGIEEHTDFPGMRYDPNIGVFGM 122
Query: 471 DFYVVLGRPGFNVXHXRRKTGKVGFPHRLTKEXAM 575
D VVL RPG + R T K+ HR+T + A+
Sbjct: 123 DVTVVLKRPGERICKRRIATRKIPTDHRVTVDDAI 157
>UniRef50_A5UL75 Cluster: Ribosomal protein L5p; n=1;
Methanobrevibacter smithii ATCC 35061|Rep: Ribosomal
protein L5p - Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861)
Length = 170
Score = 123 bits (297), Expect = 3e-27
Identities = 62/155 (40%), Positives = 96/155 (61%), Gaps = 1/155 (0%)
Frame = +3
Query: 114 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIA 293
N M + I K ++I VGE+G++L+RA +LEQ+ Q PV + ++ T FGIR+ + IA
Sbjct: 2 NPMNEVQISKATVSIGVGEAGEKLSRAITLLEQMFDQTPVKTFSKVTNPEFGIRKRQPIA 61
Query: 294 VHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGL 470
T+RG KA++ +E L+ ++ F A GN FGI+EHID+ G+KY+P IGI+G+
Sbjct: 62 CKLTLRGEKADKAIEMVLEGINKNIKPTQFDAQGNLSFGIKEHIDIPGMKYNPDIGIFGM 121
Query: 471 DFYVVLGRPGFNVXHXRRKTGKVGFPHRLTKEXAM 575
+ V +PG+ + R + KV HR++KE M
Sbjct: 122 NVSVTFEKPGYRIAKRRIQQKKVPAKHRISKEETM 156
>UniRef50_A7DSY1 Cluster: Ribosomal protein L5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 173
Score = 121 bits (292), Expect = 1e-26
Identities = 60/152 (39%), Positives = 94/152 (61%), Gaps = 1/152 (0%)
Frame = +3
Query: 120 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 299
M+ + + K+ LN+ VG+SGD + A++ LEQ++G++P A+ T R +G+R+ E I V
Sbjct: 9 MKKISLEKVVLNMGVGKSGDVIEIASRALEQISGKKPSARNAKETQRDWGVRKGEPIGVA 68
Query: 300 CTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDF 476
T+RG A+ +L+R L+ + + F GN+ FGI+EHID+ G+KY+PSIGI GL
Sbjct: 69 VTIRGDDAKALLKRLLEAKGNTVNGRAFDNFGNYSFGIREHIDIPGVKYEPSIGILGLGI 128
Query: 477 YVVLGRPGFNVXHXRRKTGKVGFPHRLTKEXA 572
V L RPG+ + + VG H +T + A
Sbjct: 129 SVTLTRPGYGIRTRSKHKASVGKSHIITSQEA 160
>UniRef50_A0RVY6 Cluster: Ribosomal protein L5; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L5 - Cenarchaeum
symbiosum
Length = 169
Score = 118 bits (285), Expect = 7e-26
Identities = 59/152 (38%), Positives = 89/152 (58%), Gaps = 1/152 (0%)
Frame = +3
Query: 120 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 299
MR + + K+ LN+ VG+SG+ + A + L +++G++P A T R FG+R+ E I
Sbjct: 5 MRKITLEKVVLNMGVGQSGNAVEVAKRALGEISGKKPCGRDAHETQRDFGVRKGEPIGAA 64
Query: 300 CTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDF 476
T+RG A + R + + +++ +F GNF FGI EHID+ GIKYDP IGI GLD
Sbjct: 65 VTIRGEDAGALARRLFEAKGGQVKGRSFDDFGNFSFGIGEHIDIPGIKYDPGIGILGLDV 124
Query: 477 YVVLGRPGFNVXHXRRKTGKVGFPHRLTKEXA 572
+ L RPG+ + + +VG HR+T A
Sbjct: 125 CMTLSRPGYGIRKRSKHKARVGRSHRITATEA 156
>UniRef50_Q673R5 Cluster: Ribosomal protein L5/L11; n=2;
environmental samples|Rep: Ribosomal protein L5/L11 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 168
Score = 116 bits (278), Expect = 5e-25
Identities = 66/146 (45%), Positives = 83/146 (56%), Gaps = 2/146 (1%)
Frame = +3
Query: 135 IRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRG 314
I K+ +NI VGE G RL A +VLE LTG +P+ + +R T R G R I T+R
Sbjct: 6 ITKVTVNIGVGEGGSRLQLAERVLELLTGLKPIRTISRMTNRDLGTRLGAPIGCKVTIRD 65
Query: 315 A-KAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGI-KYDPSIGIYGLDFYVVL 488
A K + L+ VRE L NF +GN FGI ++ D KYDP IGIYG+D VVL
Sbjct: 66 ADKVQSFLKDAFWVRENTLPSYNFDQSGNLSFGIADYTDFPAQKYDPDIGIYGMDVNVVL 125
Query: 489 GRPGFNVXHXRRKTGKVGFPHRLTKE 566
RPG V RR+ KVG HR+ K+
Sbjct: 126 ERPGHRVSRRRRRGVKVGVEHRVGKD 151
>UniRef50_Q6L1B4 Cluster: 50S ribosomal protein L5P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L5P -
Picrophilus torridus
Length = 176
Score = 112 bits (269), Expect = 6e-24
Identities = 62/153 (40%), Positives = 89/153 (58%), Gaps = 2/153 (1%)
Frame = +3
Query: 114 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIA 293
N MR + I K+ +NI VG +G+RL RAAKVLE LT +P F+ A+ TVR F IR+ I
Sbjct: 7 NSMREIVIDKVVVNIGVGAAGERLNRAAKVLELLTHHKPAFTSAKRTVRDFNIRKGLNIG 66
Query: 294 VHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGL 470
V T+R A L+ ++Y++ +F GN FGI ++ D G+KYDP IGI+G+
Sbjct: 67 VKVTLRKDDALSFLKEAFYAKDYKIPVYSFDKNGNAYFGISDYTDFKGMKYDPDIGIFGM 126
Query: 471 DFYVVL-GRPGFNVXHXRRKTGKVGFPHRLTKE 566
D +V R G+ + R K + R++KE
Sbjct: 127 DIAIVFRRRGGYRIEKRRIKKMHIPKKMRISKE 159
>UniRef50_P14124 Cluster: 50S ribosomal protein L5P; n=5;
Halobacteriaceae|Rep: 50S ribosomal protein L5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 177
Score = 111 bits (267), Expect = 1e-23
Identities = 61/153 (39%), Positives = 84/153 (54%), Gaps = 1/153 (0%)
Frame = +3
Query: 120 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 299
MR I K+ +++ +G G L A +L ++TGQ PV +KA+ TV F IR + I
Sbjct: 14 MREPRIEKVVVHMGIGHGGRDLANAEDILGEITGQMPVRTKAKRTVGEFDIREGDPIGAK 73
Query: 300 CTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDF 476
T+R AEE L+ L + EL F TGNF FG++EH + +YDPSIGIYGLD
Sbjct: 74 VTLRDEMAEEFLQTALPLA--ELATSQFDDTGNFSFGVEEHTEFPSQEYDPSIGIYGLDV 131
Query: 477 YVVLGRPGFNVXHXRRKTGKVGFPHRLTKEXAM 575
V L RPG+ V + + + HRL A+
Sbjct: 132 TVNLVRPGYRVAKRDKASRSIPTKHRLNPADAV 164
>UniRef50_Q6CKT5 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 191
Score = 107 bits (258), Expect = 1e-22
Identities = 49/127 (38%), Positives = 82/127 (64%)
Frame = -3
Query: 500 TWPAKYDVKVQSINSN*GIVLDTQVNVFLNTEAKITRGGEVVTPQFIFSDFQTPLKDFFC 321
TW +V++ ++N++ +VLDTQ++VFL+TE ++T EV Q +F D QT +DFF
Sbjct: 44 TWSTHDNVEIHTVNTDTWVVLDTQIDVFLDTETEVTGSREVSVSQLVFLDLQTSFQDFFS 103
Query: 320 FSSSDCTMDSNLFITTDTKRPHCIPSLGKYRLLSCELLQHLGGTSQPVTGFTNTDVQAKL 141
+++ +DSNLF+++DT+ + SLG L+ +L Q+LG + Q VT FTN ++Q +
Sbjct: 104 LWTTNSNVDSNLFVSSDTESSDSVSSLGLNWSLTRQLFQNLGSSGQSVTRFTNRNIQDQF 163
Query: 140 SDMKIPH 120
D++ H
Sbjct: 164 LDLQFTH 170
>UniRef50_Q3LWF5 Cluster: Ribosomal protein L11; n=1; Bigelowiella
natans|Rep: Ribosomal protein L11 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 139
Score = 103 bits (246), Expect = 4e-21
Identities = 47/130 (36%), Positives = 80/130 (61%)
Frame = +3
Query: 120 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 299
M+ + + KL L+I VG SG L +++K+L++++ Q P F A+ T+++F IRR E I+
Sbjct: 1 MKQIFLNKLILSIDVGSSGSNLYKSSKLLKKISLQFPSFGMAKRTIKTFSIRRGEYISCF 60
Query: 300 CTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFY 479
C++ K L + LK++ + + NFS T FG GI +H++LG +D IGI+G++
Sbjct: 61 CSLSKKKGILFLYKMLKLKTFTINESNFSLTSTFGIGISDHLELGYNFDQKIGIHGINII 120
Query: 480 VVLGRPGFNV 509
L R G+ +
Sbjct: 121 GDLSRRGYRI 130
>UniRef50_Q01C63 Cluster: Chromosome 03 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 03 contig 1, DNA
sequence - Ostreococcus tauri
Length = 363
Score = 81.8 bits (193), Expect = 1e-14
Identities = 45/137 (32%), Positives = 78/137 (56%), Gaps = 1/137 (0%)
Frame = -3
Query: 527 LTPXVXYVETWPAKYDVKVQSINSN*GIVLDTQVNVFLNTEAKITRGGEVVTPQFIFSDF 348
LTP V V ++DV++ +++ +VLD +VNVF +TE ++TRG EV +F F
Sbjct: 65 LTPAVDSVAR-ALQHDVEIHTVDPCGRVVLDAEVNVFADTETEVTRGAEVALEEFEFLHL 123
Query: 347 QTPLKDFF-CFSSSDCTMDSNLFITTDTKRPHCIPSLGKYRLLSCELLQHLGGTSQPVTG 171
+ L++ ++ + +LF+T + +R H + LG+ RLL+ +LLQHL + +T
Sbjct: 124 EPALQNLHRLVPVTNGDVRGDLFVTANAERAHGVARLGEDRLLTGQLLQHLRRLREAITA 183
Query: 170 FTNTDVQAKLSDMKIPH 120
N +V+ +L + PH
Sbjct: 184 LANANVEHELVNADRPH 200
>UniRef50_Q9HWE7 Cluster: 50S ribosomal protein L5; n=187;
Bacteria|Rep: 50S ribosomal protein L5 - Pseudomonas
aeruginosa
Length = 179
Score = 66.1 bits (154), Expect = 6e-10
Identities = 46/130 (35%), Positives = 70/130 (53%), Gaps = 10/130 (7%)
Frame = +3
Query: 114 NVMRNLHIRKLCLNICVGES-GDR--LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNE 284
NVM + K+ LN+ +GE+ GD+ + A LE++TGQ+PV + AR ++ F IR
Sbjct: 24 NVMEVPRVTKITLNMGLGEAVGDKKIIENAVADLEKITGQKPVVTYARKSIAGFKIREGW 83
Query: 285 KIAVHCTVRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQEHIDL-GIKY 443
I V T+R + E L+R L +VR++ L +F GN+ G++E I I Y
Sbjct: 84 PIGVKVTLRSDRMYEFLDRLLSISLPRVRDFRGLNAKSFDGRGNYSMGVKEQIIFPEIDY 143
Query: 444 DPSIGIYGLD 473
D + GLD
Sbjct: 144 DKIDALRGLD 153
>UniRef50_Q7R5U0 Cluster: GLP_81_173473_174138; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_81_173473_174138 - Giardia lamblia
ATCC 50803
Length = 221
Score = 62.5 bits (145), Expect = 7e-09
Identities = 40/136 (29%), Positives = 67/136 (49%)
Frame = -3
Query: 527 LTPXVXYVETWPAKYDVKVQSINSN*GIVLDTQVNVFLNTEAKITRGGEVVTPQFIFSDF 348
L P + E K V+V +I+++ +VLD ++NVF + E +++ GGE QF D
Sbjct: 63 LCPALIDAEPGARKDHVEVHTIDTHGRVVLDPEINVFRDAEPEVSSGGEARVGQFKVLDA 122
Query: 347 QTPLKDFFCFSSSDCTMDSNLFITTDTKRPHCIPSLGKYRLLSCELLQHLGGTSQPVTGF 168
+ L D +++ + +L D + LG+ RLL ELL+ L Q V
Sbjct: 123 EAALDDLAGLFAANGDVCGDLLTAADPEAADGEARLGERRLLVGELLEDLSSLCQRVALS 182
Query: 167 TNTDVQAKLSDMKIPH 120
++ DV+ +L + PH
Sbjct: 183 SDADVEDELLNADTPH 198
>UniRef50_Q7VQD6 Cluster: 50S ribosomal protein L5; n=4;
Bacteria|Rep: 50S ribosomal protein L5 - Blochmannia
floridanus
Length = 190
Score = 62.5 bits (145), Expect = 7e-09
Identities = 44/133 (33%), Positives = 74/133 (55%), Gaps = 10/133 (7%)
Frame = +3
Query: 114 NVMRNLHIRKLCLNICVGES---GDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNE 284
+VM+ I K+ +++ VG+S L RA + LE ++GQ+PV +KAR ++ SF IR+ +
Sbjct: 24 SVMQVPKINKITISMGVGKSIINKKFLERAIEDLEMISGQKPVITKARKSIASFKIRQGQ 83
Query: 285 KIAVHCTVRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQEHIDL-GIKY 443
+I T+R + E ER + ++R++ L +F GN+ GI+E I I Y
Sbjct: 84 EIGCKVTLRRKRMWEFFERLISIAIPRIRDFRGLSIKSFDGYGNYTMGIREQIIFPEINY 143
Query: 444 DPSIGIYGLDFYV 482
D GI G++ +
Sbjct: 144 DTIDGIRGMNITI 156
>UniRef50_P38517 Cluster: 50S ribosomal protein L5; n=18; cellular
organisms|Rep: 50S ribosomal protein L5 - Thermotoga
maritima
Length = 184
Score = 60.1 bits (139), Expect = 4e-08
Identities = 38/125 (30%), Positives = 68/125 (54%), Gaps = 10/125 (8%)
Frame = +3
Query: 141 KLCLNICVGESG---DRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVR 311
K+ +N+ +GE D + R A L ++TGQ+P+ ++AR ++ +F IR+ I + T+R
Sbjct: 37 KIVINMGIGEGSRNYDLIERHANELAKITGQKPIVTRARKSISNFKIRKGMPIGLKVTLR 96
Query: 312 GAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGL 470
GA+ L + + KVR++ L ++F GN+ FG+ E + + D I G+
Sbjct: 97 GARMYNFLYKLINIVLPKVRDFRGLDPNSFDGRGNYSFGLSEQLVFPELNPDEVRRIQGM 156
Query: 471 DFYVV 485
D +V
Sbjct: 157 DITIV 161
>UniRef50_A6PPX3 Cluster: 50S ribosomal protein L5; n=1; Victivallis
vadensis ATCC BAA-548|Rep: 50S ribosomal protein L5 -
Victivallis vadensis ATCC BAA-548
Length = 178
Score = 58.8 bits (136), Expect = 8e-08
Identities = 34/110 (30%), Positives = 60/110 (54%), Gaps = 8/110 (7%)
Frame = +3
Query: 114 NVMRNLHIRKLCLNICVGESGDR--LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEK 287
NVM+ + K+ ++ +G +R T A K + +TGQ+PV +KAR V +F +R
Sbjct: 24 NVMQIPKLEKIVISTGIGSDAERDAFTEAKKHIGAMTGQEPVITKARKNVSNFKLRVGMP 83
Query: 288 IAVHCTVRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQE 419
+ V T+RG++ E L+R + +VR++ + + F GN+ GI +
Sbjct: 84 VGVMVTLRGSRMYEFLDRFVHNALPRVRDFRGIPKTGFDGVGNYNLGISD 133
>UniRef50_Q6A6N8 Cluster: 50S ribosomal protein L5; n=125;
Bacteria|Rep: 50S ribosomal protein L5 -
Propionibacterium acnes
Length = 210
Score = 58.0 bits (134), Expect = 1e-07
Identities = 37/127 (29%), Positives = 66/127 (51%), Gaps = 10/127 (7%)
Frame = +3
Query: 135 IRKLCLNICVGESGDR---LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCT 305
+ K+ +N+ VG++ + A + + +TGQ+P +KAR ++ F +R + I H T
Sbjct: 40 LEKIVVNMGVGDAAHDSKVMDGAIRDITAITGQKPQVTKARKSIAQFKLREGQPIGCHVT 99
Query: 306 VRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQEHI-DLGIKYDPSIGIY 464
+RG + E +R L ++R++ L + F GN+ FG+ E + L I D + I
Sbjct: 100 LRGDRMWEFADRLLTLALPRIRDFRGLNSNQFDGKGNYTFGLSEQVMFLEIDQDKIVRIR 159
Query: 465 GLDFYVV 485
G+D V
Sbjct: 160 GMDITFV 166
>UniRef50_Q4FLN0 Cluster: 50S ribosomal protein L5; n=3;
Bacteria|Rep: 50S ribosomal protein L5 - Pelagibacter
ubique
Length = 184
Score = 56.8 bits (131), Expect = 3e-07
Identities = 42/148 (28%), Positives = 75/148 (50%), Gaps = 10/148 (6%)
Frame = +3
Query: 135 IRKLCLNICVGESGD--RLTRAAKV-LEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCT 305
+ K+ +N+ +G G ++ ++ + L ++TGQ+P +K + +V +F R+ + T
Sbjct: 32 VEKVVINMGLGLDGADAKIMKSTEEDLGKITGQKPTVTKFKKSVANFKTRKGTNAGLKVT 91
Query: 306 VRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIY 464
+RG K E L+R + +++++ L F GN+ FGI+EHI + +D I
Sbjct: 92 LRGNKMYEFLDRLVNIALPRIKDFRGLSPKGFDKFGNYTFGIKEHIIFPEVNFDRIDKIR 151
Query: 465 GLDFYVVLGRPGFNVXHXRRKTGKVGFP 548
GLD VV+ N H K+ FP
Sbjct: 152 GLDIVVVIS--ALNKDHSFALLEKLNFP 177
>UniRef50_Q6AP59 Cluster: 50S ribosomal protein L5; n=77;
Bacteria|Rep: 50S ribosomal protein L5 - Desulfotalea
psychrophila
Length = 179
Score = 52.8 bits (121), Expect = 6e-06
Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 10/134 (7%)
Frame = +3
Query: 114 NVMRNLHIRKLCLNICVGESGDR---LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNE 284
N M+ I K+ LN+ +GE+ + AA+ L ++ GQ+ V +KA+ ++ +F +R
Sbjct: 24 NPMQIPKIEKIVLNMGLGEAVQNPKIVEGAAEELTKIAGQRAVVTKAKKSIATFKLREGM 83
Query: 285 KIAVHCTVRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQEHIDL-GIKY 443
I T+RG K + L + + +VR++ + F GN+ GIQE I I Y
Sbjct: 84 PIGCRVTLRGEKMYDFLSKLVNIALPRVRDFRGVSPKGFDGRGNYSMGIQEQIIFPEIDY 143
Query: 444 DPSIGIYGLDFYVV 485
D I G + +V
Sbjct: 144 DKIDKIKGFNITIV 157
>UniRef50_Q6YR10 Cluster: 50S ribosomal protein L5; n=22;
Bacteria|Rep: 50S ribosomal protein L5 - Onion yellows
phytoplasma
Length = 181
Score = 51.2 bits (117), Expect = 2e-05
Identities = 38/134 (28%), Positives = 68/134 (50%), Gaps = 10/134 (7%)
Frame = +3
Query: 114 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQL---TGQQPVFSKARYTVRSFGIRRNE 284
+VM+ + K+ +N+ VG++ + V+E+L +GQ PV +KA+ + +F +R
Sbjct: 26 SVMQVPKVEKVVINMGVGDAIFNVKVLDDVVEELKLLSGQSPVITKAKKAISNFKLREGM 85
Query: 285 KIAVHCTVRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQEHIDL-GIKY 443
I T+RGA+ E L + +VR++ + +F GN+ G++E I I
Sbjct: 86 PIGAKVTLRGARKEAFLCKLTRLVFPRVRDFRGISGKSFDGRGNYALGLKEQIVFPEINI 145
Query: 444 DPSIGIYGLDFYVV 485
D I G+D +V
Sbjct: 146 DKVKKIRGMDIIIV 159
>UniRef50_Q1ACG2 Cluster: Chloroplast 50S ribosomal protein L5; n=5;
Eukaryota|Rep: Chloroplast 50S ribosomal protein L5 -
Chara vulgaris (Common stonewort)
Length = 189
Score = 51.2 bits (117), Expect = 2e-05
Identities = 35/134 (26%), Positives = 67/134 (50%), Gaps = 10/134 (7%)
Frame = +3
Query: 114 NVMRNLHIRKLCLNICVGESGDR---LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNE 284
N+ + +++K+ +N GE+ L K L + Q+P+ ++AR + F IR+
Sbjct: 25 NIHQLPYLKKIVINCGFGEASQNSKFLEGTIKDLSIIASQKPIVTRARKAIAGFQIRKKM 84
Query: 285 KIAVHCTVRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQEHIDL-GIKY 443
+ V T+RG L+R + ++++++ L +F GNF FGI+E + I Y
Sbjct: 85 PVGVCVTLRGETMYAFLDRLIHLALPRIKDFQGLNWKSFDGYGNFHFGIREQLIFPEIHY 144
Query: 444 DPSIGIYGLDFYVV 485
D I G++ ++
Sbjct: 145 DKIDKIRGMNISII 158
>UniRef50_Q6B8W5 Cluster: Chloroplast 50S ribosomal protein L5; n=4;
Eukaryota|Rep: Chloroplast 50S ribosomal protein L5 -
Gracilaria tenuistipitata var. liui (Red alga)
Length = 179
Score = 50.4 bits (115), Expect = 3e-05
Identities = 35/125 (28%), Positives = 63/125 (50%), Gaps = 10/125 (8%)
Frame = +3
Query: 141 KLCLNICVGESGDR---LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVR 311
K+ +N +GE+ + L ++ + +TGQ+P +K++ + F IR N I + T+R
Sbjct: 34 KITINRGLGEAANNKQVLEKSMNEIAAITGQKPKITKSKKAIAGFKIRENIAIGLVVTLR 93
Query: 312 GAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGL 470
K + L + + ++R++ + F GN+ G++E I IKYD I GL
Sbjct: 94 RDKMYDFLNKLINLALPRIRDFRGISYKTFDGRGNYNLGLKEQIIFPEIKYDNVDKIRGL 153
Query: 471 DFYVV 485
D +V
Sbjct: 154 DITIV 158
>UniRef50_A5CCK0 Cluster: 50S ribosomal protein L5; n=1; Orientia
tsutsugamushi Boryong|Rep: 50S ribosomal protein L5 -
Orientia tsutsugamushi (strain Boryong) (Rickettsia
tsutsugamushi)
Length = 189
Score = 50.0 bits (114), Expect = 4e-05
Identities = 28/104 (26%), Positives = 58/104 (55%), Gaps = 9/104 (8%)
Frame = +3
Query: 135 IRKLCLNICVGES---GDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCT 305
I+K+ + +CVG++ + K + +TGQ+P KA+ ++ +F +R+ IA T
Sbjct: 36 IKKIVVTMCVGDAVVDSKIIYYVKKCMAMITGQEPGLIKAKKSIAAFKLRKGMPIACKVT 95
Query: 306 VRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQE 419
+R +AE+ + R + ++++++ +F GNF FGI++
Sbjct: 96 LRKKRAEDFIRRLVFEVFPRIKDFKGFSIKSFDREGNFSFGIKD 139
>UniRef50_P73308 Cluster: 50S ribosomal protein L5; n=227; cellular
organisms|Rep: 50S ribosomal protein L5 - Synechocystis
sp. (strain PCC 6803)
Length = 180
Score = 50.0 bits (114), Expect = 4e-05
Identities = 36/135 (26%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Frame = +3
Query: 123 RNLH----IRKLCLNICVGESGDR---LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 281
+N+H + K+ +N +GE+ L + L +TGQ+PV ++AR + F IR
Sbjct: 24 KNIHQVPKLTKVTVNRGLGEASQNAKALESSLTELATITGQKPVVTRARKAIAGFKIREG 83
Query: 282 EKIAVHCTVRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQEHIDL-GIK 440
+ V T+R + L+R + ++R++ + ++F GN+ GI+E + I
Sbjct: 84 MPVGVMVTLRSERMYAFLDRLINLALPRIRDFRGISPNSFDGRGNYSLGIREQLIFPEID 143
Query: 441 YDPSIGIYGLDFYVV 485
YD I G+D ++
Sbjct: 144 YDTIDQIRGMDVSII 158
>UniRef50_Q9G893 Cluster: Ribosomal protein L5; n=1; Malawimonas
jakobiformis|Rep: Ribosomal protein L5 - Malawimonas
jakobiformis
Length = 174
Score = 49.6 bits (113), Expect = 5e-05
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 9/133 (6%)
Frame = +3
Query: 114 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIA 293
N+M I+K+ +NI V +S +R+ VLE +TGQ+ KA+ ++ SF +R++ IA
Sbjct: 22 NIMEIPSIKKISVNITV-DSKNRVIEPLMVLELITGQKAKVLKAKKSISSFNLRKDMYIA 80
Query: 294 VHCTVRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQE---HIDLGIKYD 446
T++ + + + K+RE++ DN + N+ I+ ++ ++D
Sbjct: 81 CKVTLQKKNMYNFINKLINIVLPKIREFKGFSVDNIDSQNNYTLSIKNMSIFPEIEYQFD 140
Query: 447 PSIGIYGLDFYVV 485
IYG+D +V
Sbjct: 141 IFNKIYGMDITIV 153
>UniRef50_A5KRR2 Cluster: 50S ribosomal protein L5; n=1; candidate
division TM7 genomosp. GTL1|Rep: 50S ribosomal protein
L5 - candidate division TM7 genomosp. GTL1
Length = 194
Score = 48.8 bits (111), Expect = 9e-05
Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 8/126 (6%)
Frame = +3
Query: 195 AKVLEQLTGQQPVFSKARYTVRSFGIRRN-EKIAVHCTVRGAKAEEILERGL-----KVR 356
+ L ++TGQQPV AR ++ SF IR +I V T+RGA+ E L+R + +VR
Sbjct: 64 SNTLRKITGQQPVDRMARKSIASFKIRSGMNRIGVSVTLRGARMYEFLDRLVNIALPRVR 123
Query: 357 EYE-LRRDNFSATGNFGFGI-QEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVXHXRRKT 530
++ + F +GN+ GI + I + ++ + ++GL V H R
Sbjct: 124 DFHGVGAKGFDHSGNYSLGITDQSIFAELAFEDTQVLHGLQVTFVFRTE--KPEHTRNLL 181
Query: 531 GKVGFP 548
K G P
Sbjct: 182 EKFGMP 187
>UniRef50_O04603 Cluster: 50S ribosomal protein L5, chloroplast
precursor; n=43; cellular organisms|Rep: 50S ribosomal
protein L5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 262
Score = 48.4 bits (110), Expect = 1e-04
Identities = 30/130 (23%), Positives = 69/130 (53%), Gaps = 10/130 (7%)
Frame = +3
Query: 114 NVMRNLHIRKLCLNICVGESGDR---LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNE 284
N+ + ++K+ +N +G++ L A K + +TGQ+P+ ++AR ++ +F IR ++
Sbjct: 79 NIHQVPKVQKIVVNCGIGDAAQNDKGLEAAMKDIALITGQKPIKTRARASIATFKIREDQ 138
Query: 285 KIAVHCTVRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQEH-IDLGIKY 443
+ + T+RG L+R + + R+++ + +F GN+ G+++ + I++
Sbjct: 139 PLGIAVTLRGDVMYSFLDRLINLALPRTRDFQGVSPSSFDGNGNYSIGVKDQGVFPEIRF 198
Query: 444 DPSIGIYGLD 473
D G+D
Sbjct: 199 DAVGKTRGMD 208
>UniRef50_Q2GEC7 Cluster: 50S ribosomal protein L5; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: 50S ribosomal
protein L5 - Neorickettsia sennetsu (strain Miyayama)
Length = 177
Score = 46.0 bits (104), Expect = 6e-04
Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 10/125 (8%)
Frame = +3
Query: 141 KLCLNICVG-ESGDR--LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVR 311
K+CL++ +G S D L A + L + GQ+ V + A+ ++ SF +R+ + T+R
Sbjct: 31 KVCLSVGLGGASSDSKLLASAVEDLSLIAGQKAVVTVAKKSISSFKLRKGFPVGCRVTLR 90
Query: 312 GAKAEEILERGLKV-----REYE-LRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGL 470
+ + + R L + ++++ NF GN FG+ EHI + +D + I G+
Sbjct: 91 KRRMFDFINRLLYMALPDQKDFKGFTMRNFDGHGNMAFGLTEHIVFPEVDFDKTYRIIGM 150
Query: 471 DFYVV 485
+ VV
Sbjct: 151 NVVVV 155
>UniRef50_Q30TV2 Cluster: 50S ribosomal protein L5; n=2;
Epsilonproteobacteria|Rep: 50S ribosomal protein L5 -
Thiomicrospira denitrificans (strain ATCC 33889 / DSM
1351)
Length = 181
Score = 45.6 bits (103), Expect = 8e-04
Identities = 31/134 (23%), Positives = 63/134 (47%), Gaps = 10/134 (7%)
Frame = +3
Query: 114 NVMRNLHIRKLCLNICVG---ESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNE 284
N M+ + K+ +++ G + + + + GQ+ A+ +V F +R
Sbjct: 23 NPMQTPALEKIVISVGAGFAMKDNKLIQNIEDTITTIAGQKASTVIAKKSVAGFKVREGM 82
Query: 285 KIAVHCTVRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQEHIDL-GIKY 443
+ V T+RG K +R + +V+++ + R+ F GN+ FG+QE + + Y
Sbjct: 83 PVGVRVTLRGEKMYNFFDRLVSMALPRVKDFRGVPRNGFDGRGNYNFGLQEQLIFPEVSY 142
Query: 444 DPSIGIYGLDFYVV 485
D + I+G++ VV
Sbjct: 143 DSVMQIHGMNITVV 156
>UniRef50_P56033 Cluster: 50S ribosomal protein L5; n=6;
Bacteria|Rep: 50S ribosomal protein L5 - Helicobacter
pylori (Campylobacter pylori)
Length = 181
Score = 44.8 bits (101), Expect = 0.001
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 7/104 (6%)
Frame = +3
Query: 195 AKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGL-----KVRE 359
A+ + + GQ+ V +KA+ +V F IR + T+R + LE+ + +V++
Sbjct: 54 AQTISLIAGQKAVITKAKKSVAGFKIREGMAVGAKVTLRNKRMYNFLEKLIVISLPRVKD 113
Query: 360 YE-LRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVV 485
+ + R+ F GN+ FGI E + + YD + +G++ +V
Sbjct: 114 FRGISRNGFDGCGNYTFGINEQLIFPEVVYDDIMVSHGMNITMV 157
>UniRef50_O21252 Cluster: Mitochondrial 60S ribosomal protein L5;
n=3; cellular organisms|Rep: Mitochondrial 60S ribosomal
protein L5 - Reclinomonas americana
Length = 182
Score = 44.4 bits (100), Expect = 0.002
Identities = 32/129 (24%), Positives = 68/129 (52%), Gaps = 12/129 (9%)
Frame = +3
Query: 135 IRKLCLNICVGESGD---RLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCT 305
I K+ +N+ V E+ ++ +LE +TGQ+ + +KA+ ++ +F IR+ I V T
Sbjct: 31 IDKIIVNMGVKEAASDKKQILAPLLILELITGQKAIVTKAKKSISNFKIRKGFPIGVSVT 90
Query: 306 VRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQEHI---DLGIKYDPSIG 458
+RG E L + + K+R+++ + + + G+ GI++ + ++ +YD
Sbjct: 91 LRGNNMYEFLSKLITLVLPKIRDFKGVPFTSINKYGHLAIGIKDLLVFPEIESEYDKFNR 150
Query: 459 IYGLDFYVV 485
+YG + +V
Sbjct: 151 VYGANIVIV 159
>UniRef50_A3GUR6 Cluster: 50S ribosomal protein L5; n=1; Vibrio
cholerae NCTC 8457|Rep: 50S ribosomal protein L5 -
Vibrio cholerae NCTC 8457
Length = 112
Score = 43.6 bits (98), Expect = 0.003
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Frame = +3
Query: 114 NVMRNLHIRKLCLNICVGES-GDR--LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNE 284
+VM+ I K+ LN+ VGE+ D+ L AA + ++GQ+P+ +KAR +V F IR
Sbjct: 24 SVMQVPRIEKITLNMGVGEAINDKKLLENAASDMAIISGQKPLITKARKSVAGFKIREGY 83
Query: 285 KIAVHCTVRGAK 320
I T+RG +
Sbjct: 84 PIGCKVTLRGER 95
>UniRef50_Q6KI43 Cluster: 50S ribosomal protein L5; n=12;
Bacteria|Rep: 50S ribosomal protein L5 - Mycoplasma
mobile
Length = 182
Score = 43.6 bits (98), Expect = 0.003
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 10/127 (7%)
Frame = +3
Query: 135 IRKLCLNICVGESGDRLTRAAKVLEQLT---GQQPVFSKARYTVRSFGIRRNEKIAVHCT 305
I+K+ +N+ G +V+ +LT GQ P + A+ ++ SF IR + T
Sbjct: 31 IKKIVINMTAGNEVSNTKAVEEVINELTLITGQTPYKTHAKKSLASFKIREGMPMGGKVT 90
Query: 306 VRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIY 464
+R K + L++ + ++R++ + +F GNF GI+E I I +D
Sbjct: 91 LRRDKMWDFLQKLIDIVIPRIRDFRGISPKSFDGRGNFALGIEEEIIFPEIDFDKIRRNK 150
Query: 465 GLDFYVV 485
GLD +V
Sbjct: 151 GLDVIIV 157
>UniRef50_P49547 Cluster: Chloroplast 50S ribosomal protein L5; n=4;
Bacillariophyta|Rep: Chloroplast 50S ribosomal protein
L5 - Odontella sinensis (Marine centric diatom)
Length = 238
Score = 43.2 bits (97), Expect = 0.005
Identities = 22/87 (25%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Frame = +3
Query: 183 LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGL----- 347
L ++ +TGQ+P+ ++A+ + F IR N ++ + T+RG+K L + +
Sbjct: 68 LKKSINEFTAITGQKPIITRAKKAIAGFKIRENMELGLTVTLRGSKMYSFLTKLIFFTFA 127
Query: 348 KVREYE-LRRDNFSATGNFGFGIQEHI 425
++R++ L +F GN+ G++E +
Sbjct: 128 QIRDFRGLSVRSFDKAGNYTLGLKEQL 154
>UniRef50_Q2EEW3 Cluster: Ribosomal protein L5; n=1; Helicosporidium
sp. ex Simulium jonesii|Rep: Ribosomal protein L5 -
Helicosporidium sp. subsp. Simulium jonesii (Green alga)
Length = 181
Score = 42.3 bits (95), Expect = 0.008
Identities = 29/119 (24%), Positives = 57/119 (47%), Gaps = 7/119 (5%)
Frame = +3
Query: 213 LTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGL-----KVREYE-LRR 374
+TGQ+P ++A+ + +F I++ + + T+RGAK L + + +R+++ +
Sbjct: 63 MTGQKPKLNRAKKHIAAFKIKKKMILGLSVTLRGAKMYAFLYKFINIILPNIRQFQGIEN 122
Query: 375 DNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVVLGRPGFNVXHXRRKTGKVGFP 548
F + GN F I ++ + Y+P + G F V + NV + +GFP
Sbjct: 123 KQFDSLGNITFPIYSQSNIPELPYNPRVEKRG--FNVTINIKAKNVSEAKALCAYLGFP 179
>UniRef50_A7CZB2 Cluster: Ribosomal protein L5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein L5 - Opitutaceae
bacterium TAV2
Length = 204
Score = 41.1 bits (92), Expect = 0.018
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 8/103 (7%)
Frame = +3
Query: 135 IRKLCLNICVGESGDRLTRAAKV---LEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCT 305
I K+ LN + D+ T+ A + L + GQ+PV +K+R V +F +R+ + + + T
Sbjct: 41 IVKINLNTGIDAEADK-TQIADIQRDLGNIAGQKPVLTKSRKAVSNFKLRQGQIVGAYVT 99
Query: 306 VRGAKAEEILERGLKV-----REYELRRDNFSATGNFGFGIQE 419
+RG E L R L V R++ GN+ GI +
Sbjct: 100 LRGNAMWEFLYRLLAVALPTIRDFRGVPAKLDGRGNYNLGISD 142
>UniRef50_A7P1Q7 Cluster: Chromosome chr19 scaffold_4, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr19 scaffold_4, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 188
Score = 40.3 bits (90), Expect = 0.032
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +3
Query: 276 RNEKIAVHCTVRGAKAEEILERGLKVREYEL 368
R KIA + TV+G KA +LE GLKV+EYEL
Sbjct: 114 RYTKIACYVTVKGEKAMRLLESGLKVKEYEL 144
>UniRef50_P46749 Cluster: Mitochondrial 60S ribosomal protein L5;
n=1; Prototheca wickerhamii|Rep: Mitochondrial 60S
ribosomal protein L5 - Prototheca wickerhamii
Length = 231
Score = 37.9 bits (84), Expect = 0.17
Identities = 23/99 (23%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Frame = +3
Query: 114 NVMRNLHIRKLCLNIC----VGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 281
N+M + + K+ N GE + + A LE +TGQ+P ++ A+ ++ +F +R+N
Sbjct: 61 NIMECVSLNKIVCNTSSKHYAGEK-ESILPAFTALEMITGQKPKYTCAKKSISTFKLRQN 119
Query: 282 EKIAVHCTVRGAKAEEILERGLKVREYELR--RDNFSAT 392
+ + ++RG LE+ + + ++ +N+S++
Sbjct: 120 QILGCKNSLRGNTMYRFLEKYISIVSTRIKDWSENYSSS 158
>UniRef50_Q9MAT2 Cluster: F13M7.17; n=1; Arabidopsis thaliana|Rep:
F13M7.17 - Arabidopsis thaliana (Mouse-ear cress)
Length = 665
Score = 36.7 bits (81), Expect = 0.39
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Frame = +3
Query: 327 EILERGLKVREYELRR--DNFSATGNFGFGIQEH---IDLGIKYDPSIGIYGLDFYVVLG 491
E+LE+GLK EY + S +G G GI+ H +D GIK D +IG +D Y G
Sbjct: 283 EMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCG 342
>UniRef50_Q9G4D4 Cluster: Ribosomal protein L5; n=1;
Thraustochytrium aureum|Rep: Ribosomal protein L5 -
Thraustochytrium aureum
Length = 190
Score = 35.1 bits (77), Expect = 1.2
Identities = 13/47 (27%), Positives = 29/47 (61%)
Frame = +3
Query: 201 VLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILER 341
++E +TGQ+P S ++ +F IR+ + + ++ T+RG + +E+
Sbjct: 59 IIELITGQKPKISFSKKDNSNFNIRKGDLVGIYVTLRGPRIFSFIEK 105
>UniRef50_A1RXI7 Cluster: Methyltransferase type 11; n=1;
Thermofilum pendens Hrk 5|Rep: Methyltransferase type 11
- Thermofilum pendens (strain Hrk 5)
Length = 297
Score = 35.1 bits (77), Expect = 1.2
Identities = 21/54 (38%), Positives = 27/54 (50%)
Frame = +3
Query: 204 LEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYE 365
+ +TG P+ S A VR G+ R EK+ CT G A LERG +V E
Sbjct: 121 MHNITGIDPL-SDAERKVRMLGVARGEKVLDVCTGLGYTAIRALERGAEVVSIE 173
>UniRef50_UPI0000D55752 Cluster: PREDICTED: similar to CG1964-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG1964-PA - Tribolium castaneum
Length = 1090
Score = 33.9 bits (74), Expect = 2.8
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = -3
Query: 335 KDFFCFSSSDCTMDSNLFITTDTKRPHCIPSLGKYRLLSCELLQHLGGTSQP-VTGFTNT 159
K+F CF +CT ++ + + CIP G + +CEL L G +QP ++ F
Sbjct: 620 KEFVCFMG-ECT--GSICLAYGLESCQCIPKKGDPKTKACELCCKLPGDNQPCLSSFDWN 676
Query: 158 DVQAKLSDM 132
D+ + DM
Sbjct: 677 DMPYDIPDM 685
>UniRef50_Q5DZU7 Cluster: Putative uncharacterized protein; n=1;
Vibrio fischeri ES114|Rep: Putative uncharacterized
protein - Vibrio fischeri (strain ATCC 700601 / ES114)
Length = 120
Score = 33.9 bits (74), Expect = 2.8
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = +3
Query: 237 SKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNF 401
+KA + ++ G+RRNE+ ++ + + E+G+ + E+E TG F
Sbjct: 21 AKAEFKIKGMGMRRNEEALIYRIPSHSTKAQYYEKGVTINEFEKAHQRLVNTGFF 75
>UniRef50_Q589Y5 Cluster: Serine protease; n=3; Obtectomera|Rep:
Serine protease - Bombyx mori (Silk moth)
Length = 392
Score = 33.9 bits (74), Expect = 2.8
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +3
Query: 276 RNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFG-IQEHIDLGI-KYDP 449
R+ A HCT R KAEE+ R + EY+++R N+S T NF I++H I Y
Sbjct: 193 RHVLTAAHCTRRW-KAEELFVR---LGEYDMKRTNYSRTYNFKVSEIRQHEAFQIANYKN 248
Query: 450 SIGIYGLD 473
I I L+
Sbjct: 249 DIAILKLE 256
>UniRef50_Q1MDG2 Cluster: Conserved hypothetical exported protein
precursor; n=2; Rhizobium|Rep: Conserved hypothetical
exported protein precursor - Rhizobium leguminosarum bv.
viciae (strain 3841)
Length = 560
Score = 32.7 bits (71), Expect = 6.4
Identities = 14/55 (25%), Positives = 30/55 (54%)
Frame = -1
Query: 319 LAPRTVQWTAIFSLRRIPKDRTVYLALENTGCCPVSCSNTLAARVSLSPDSPTQM 155
++P VQ A + ++PK + + L + G C C+ ++A ++PD+P ++
Sbjct: 313 VSPAPVQDAAAETSEKLPKTQPMDFLLMSNGNCREECTQWISADGDITPDTPARL 367
>UniRef50_A0RPV7 Cluster: Wbgx protein; n=3; Campylobacter|Rep: Wbgx
protein - Campylobacter fetus subsp. fetus (strain
82-40)
Length = 377
Score = 32.7 bits (71), Expect = 6.4
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +3
Query: 324 EEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYD 446
+E+ +R +R + + D+F GN G+ + + +D+G KYD
Sbjct: 199 DEMAKRARLIRNHAIVNDSFDKDGNLGY-VYDVVDIGQKYD 238
>UniRef50_Q2R3R6 Cluster: Transposon protein, putative, Pong
sub-class; n=2; Oryza sativa|Rep: Transposon protein,
putative, Pong sub-class - Oryza sativa subsp. japonica
(Rice)
Length = 596
Score = 32.7 bits (71), Expect = 6.4
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +3
Query: 282 EKIAVHCTVRGAKAEEILERGLK 350
EKIA + TVRG KA ++LE GLK
Sbjct: 280 EKIACYVTVRGEKAMQLLESGLK 302
>UniRef50_A7A6S7 Cluster: Putative uncharacterized protein; n=1;
Bifidobacterium adolescentis L2-32|Rep: Putative
uncharacterized protein - Bifidobacterium adolescentis
L2-32
Length = 257
Score = 32.3 bits (70), Expect = 8.4
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Frame = +3
Query: 150 LNICVGE-SGDRLTR--AAKVLEQLT-GQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGA 317
+N VGE +G+ + AA+ L+ LT QP S+A Y SFG R+ + C VR
Sbjct: 41 VNPTVGEMTGEYVATGSAAETLQSLTIDDQP--SRAGYDRDSFGFRQTDDDGNGCDVR-- 96
Query: 318 KAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIG 458
E++L R L Y + S +G+ G G + G+ DP G
Sbjct: 97 --EDVLARDLTDVRYIAGSGSSSDSGS-GSGAGCKVKSGVLSDPYTG 140
>UniRef50_O15026 Cluster: KIAA0309 protein; n=17; Eutheria|Rep:
KIAA0309 protein - Homo sapiens (Human)
Length = 3053
Score = 32.3 bits (70), Expect = 8.4
Identities = 37/136 (27%), Positives = 52/136 (38%), Gaps = 5/136 (3%)
Frame = -1
Query: 547 GNPTFPVLRLXCXTLKPGRXXXXXXXXXXXXIEGSYLIPKSMCS*IPKPKLPVAEKLSRR 368
GNP P +L P G L P S P P L A +
Sbjct: 1528 GNPQGP-FPTQTLSLTPASSLVPTPAQTLSLAPGPPLGPTQTLSLAPAPPLAPASPVGPA 1586
Query: 367 NSYSLTFKPLSRISSALAPRTVQWTAIFSLRRIP-----KDRTVYLALENTGCCPVSCSN 203
+++LT P S +S LAP +VQ T S +P +T+ LA +T P S ++
Sbjct: 1587 PAHTLTLAPASSSASLLAPASVQ-TLTLSPAPVPTLGPAAAQTLALAPASTQ-SPASQAS 1644
Query: 202 TLAARVSLSPDSPTQM 155
+L S + P M
Sbjct: 1645 SLVVSASGAAPLPVTM 1660
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 567,264,754
Number of Sequences: 1657284
Number of extensions: 10844670
Number of successful extensions: 28187
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 27401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28154
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39571085965
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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