Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_E24
         (577 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   3.1  
AY928182-1|AAX22219.1|  335|Anopheles gambiae phenoloxidase inhi...    23   7.1  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   9.4  
AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor O...    23   9.4  
AY363726-1|AAR14939.1|  331|Anopheles gambiae seven transmembran...    23   9.4  
AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembran...    23   9.4  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       23   9.4  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    23   9.4  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.2 bits (50), Expect = 3.1
 Identities = 13/62 (20%), Positives = 30/62 (48%)
 Frame = +3

Query: 309  RGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVL 488
            R A   + LE    + +++L  +N  +  NF FG+     L ++++ +  +  ++ Y V 
Sbjct: 3256 RIAALSDELEESRHILQHKLYSNNSQSLNNFKFGLHTQEILPLQFNKASSMATINEYRVC 3315

Query: 489  GR 494
             +
Sbjct: 3316 SK 3317


>AY928182-1|AAX22219.1|  335|Anopheles gambiae phenoloxidase
           inhibitor protein protein.
          Length = 335

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 13/46 (28%), Positives = 20/46 (43%)
 Frame = -3

Query: 350 FQTPLKDFFCFSSSDCTMDSNLFITTDTKRPHCIPSLGKYRLLSCE 213
           + TP      F++      S++  TT T  P     +G+Y L S E
Sbjct: 134 YSTPQISMVNFTNRIGDETSSILTTTHTSVPKMCAKIGEYCLTSSE 179


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = -3

Query: 254 CIPSLGKYRLLSCELLQHLGGTSQPVTGFTNTDVQAKLSDMKIPHY 117
           CI S    RL   +LL  +G  +QP   ++  D  +  +   I HY
Sbjct: 207 CISSF-TLRLKPSDLLFVIGDFNQPSISWSTADPSSSPAYSSITHY 251


>AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor
           Or83b protein.
          Length = 478

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -3

Query: 227 LLSCELLQHLGG 192
           LL+CE LQHL G
Sbjct: 223 LLACEQLQHLKG 234


>AY363726-1|AAR14939.1|  331|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 331

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -3

Query: 227 LLSCELLQHLGG 192
           LL+CE LQHL G
Sbjct: 76  LLACEQLQHLKG 87


>AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 478

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -3

Query: 227 LLSCELLQHLGG 192
           LL+CE LQHL G
Sbjct: 223 LLACEQLQHLKG 234


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -3

Query: 275 TDTKRPHCIPSLGKYR 228
           TD +RPHCI   G  R
Sbjct: 326 TDCERPHCITGDGVRR 341


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +3

Query: 489 GRPGFNVXHXRRKTGKVGFP 548
           G+PG+ +   +   G  GFP
Sbjct: 498 GQPGYGIPGQKGNAGMAGFP 517


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 592,284
Number of Sequences: 2352
Number of extensions: 11359
Number of successful extensions: 24
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54665910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)