Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_E22
(634 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0873 + 22194172-22195434,22195534-22195670,22197531-221976... 33 0.25
11_06_0710 - 26492093-26493460 31 1.0
03_02_0715 + 10621789-10623243,10624074-10625018 30 1.3
02_01_0099 + 726576-727105,727899-728048,728510-728635,728726-72... 30 1.3
12_02_1035 - 25570009-25571241,25571940-25573709,25573797-255751... 30 1.8
01_01_0128 - 1167904-1168749,1168790-1168863,1169419-1169491,117... 30 1.8
01_01_0033 + 260562-260661,260895-260941,261582-261681,261925-26... 29 3.1
05_05_0199 - 23165776-23166259,23166356-23167128,23167633-231678... 28 5.4
03_03_0186 + 15243150-15243563,15243685-15243777,15244604-152446... 28 5.4
01_06_0256 - 27923497-27923855,27923944-27924016,27924116-27924121 28 5.4
12_01_0223 + 1708420-1708512,1708790-1709008,1709117-1709330,170... 28 7.1
09_02_0253 - 6319198-6319240,6319364-6319552,6319650-6319995,632... 28 7.1
12_01_0220 - 1657554-1657620,1657943-1658109,1658110-1658267,165... 27 9.4
09_04_0087 + 14476539-14476675,14478876-14479635,14479720-144798... 27 9.4
06_03_0850 - 25354002-25354391,25354480-25354575,25355352-253556... 27 9.4
03_06_0146 - 31976538-31978643,31978653-31978751 27 9.4
02_05_0608 + 30329174-30329362,30329681-30329907,30330035-303301... 27 9.4
>07_03_0873 +
22194172-22195434,22195534-22195670,22197531-22197639,
22197739-22197865,22197952-22198012,22199332-22199722
Length = 695
Score = 32.7 bits (71), Expect = 0.25
Identities = 19/78 (24%), Positives = 33/78 (42%)
Frame = +2
Query: 293 APSDSEDGYSENEKRLLDKVRKRKHESDSEEEMYAFXXXXXXXXQKDDLGIADSDVEGQE 472
A E+G SE+E +D K + EEE A + D++ E +
Sbjct: 60 AEDAKEEGASESEGEAMDVEAKESADEKEEEEAEAEADGDEGEDKSDEMDAEAGAAEEEA 119
Query: 473 KSDDDLPDSKAWGKNKQS 526
K +++L D++ G+ S
Sbjct: 120 KEEEELKDAEVEGEGAGS 137
>11_06_0710 - 26492093-26493460
Length = 455
Score = 30.7 bits (66), Expect = 1.0
Identities = 20/74 (27%), Positives = 32/74 (43%)
Frame = +2
Query: 305 SEDGYSENEKRLLDKVRKRKHESDSEEEMYAFXXXXXXXXQKDDLGIADSDVEGQEKSDD 484
++DG E+EK+ K +K K +S +++ A DD + + K+ D
Sbjct: 126 TDDGEDESEKKKKKKKKKSKSKSSDDDDDDAEKKSKKKSKNSDDDEDDKKKSKKKPKNPD 185
Query: 485 DLPDSKAWGKNKQS 526
D D K K K S
Sbjct: 186 DDEDDKKKSKKKSS 199
>03_02_0715 + 10621789-10623243,10624074-10625018
Length = 799
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +2
Query: 353 RKRKHESDSEEEMYAFXXXXXXXXQKDDLGIADSDVEGQEKSDDDLPDSKAWGK 514
R+RK+E D + Y+ +DL + D+E +E+ DD+ P SK K
Sbjct: 102 RRRKYEDDDD---YSEEEDDRVDEYGEDLEEEEEDLEEEEEEDDEAPRSKRMKK 152
>02_01_0099 +
726576-727105,727899-728048,728510-728635,728726-729714,
729776-729818,730101-730218,730743-730853
Length = 688
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -3
Query: 479 LIFPVLQHHCLLFPNHPFDLIPRQNQRKHTFPL 381
L++P+ H L P+HP IP R H PL
Sbjct: 7 LLYPLPSHLLPLLPSHPLVRIPSSTSRAHLPPL 39
>12_02_1035 -
25570009-25571241,25571940-25573709,25573797-25575118,
25575208-25575555,25576540-25576633
Length = 1588
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/89 (21%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Frame = +2
Query: 230 DIDVMADKIRINSRFDQKENYAPSDSEDGYSENEKRLLDKVRKRKHESDSEEEMYAFXXX 409
++ ++ + +R+ ++ NY+ + LL++ R+R+++ EE
Sbjct: 623 EVIMLQEMLRLEREAHKELNYSGKTQFSAVQKQLSFLLEEGRRRENQLQDEEHKIVEAQM 682
Query: 410 XXXXXQK--DDLGIADSDVEGQEKSDDDL 490
QK D+ A+SDV GQ + +L
Sbjct: 683 EIFVLQKCLGDMAEANSDVSGQLQKQKEL 711
>01_01_0128 - 1167904-1168749,1168790-1168863,1169419-1169491,
1171148-1171398,1171442-1171687,1172220-1172415,
1172796-1172876,1172966-1173169,1173671-1173880,
1173953-1174174,1174437-1174480,1174974-1175052,
1175066-1175227,1175337-1175564,1175786-1175815,
1175905-1176273,1176356-1176571,1177202-1177683,
1177930-1177975
Length = 1352
Score = 29.9 bits (64), Expect = 1.8
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 6/56 (10%)
Frame = +2
Query: 236 DVMADKIRINSRFDQKENYAPSDSE-----DGYSENEKRLLDKVRKRKH-ESDSEE 385
D A + ++ SR ++ ++ SDSE DG ++ KR D+ R RKH SDS+E
Sbjct: 1107 DAEAKEKKLKSRKHRRRGHSSSDSESDSDSDGDRKHRKRK-DRKRHRKHGHSDSDE 1161
>01_01_0033 +
260562-260661,260895-260941,261582-261681,261925-262181,
262525-262640,263014-263098,264236-264415,264740-264817,
264909-264970,265138-265246,266237-266514,266591-266657,
266734-266802,266880-266981,267309-267443
Length = 594
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 443 IADSDVEGQEKSDDDLPDSKAWGKNKQSYY 532
IA D + ++ +DD D +WG+ K +YY
Sbjct: 93 IAGGD-DSMDEHEDDHKDKNSWGRGKNAYY 121
>05_05_0199 -
23165776-23166259,23166356-23167128,23167633-23167869,
23167973-23168197
Length = 572
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +2
Query: 452 SDVEGQEKSDDDLPDSKAWGKN 517
S V G E DDD PDSK W ++
Sbjct: 338 SSVGGGEDLDDDEPDSKRWRRD 359
>03_03_0186 + 15243150-15243563,15243685-15243777,15244604-15244666,
15245028-15245114,15245197-15245349,15245422-15245579,
15246458-15246692,15246782-15246892,15246942-15246968,
15247269-15248327,15248432-15248692,15249011-15249196,
15249642-15250793,15250886-15251236,15251343-15251738
Length = 1581
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/70 (21%), Positives = 29/70 (41%)
Frame = +2
Query: 344 DKVRKRKHESDSEEEMYAFXXXXXXXXQKDDLGIADSDVEGQEKSDDDLPDSKAWGKNKQ 523
D V + K E D+ + M + +D+ + + V+G + + + + KNK
Sbjct: 1498 DAVMRNKMEEDTIDTMQEENKMDGKNPEANDMAMEEKTVDGDDDPKNKMEEGNTEAKNKM 1557
Query: 524 SYYATDYVDK 553
T+ DK
Sbjct: 1558 EEGNTEAKDK 1567
>01_06_0256 - 27923497-27923855,27923944-27924016,27924116-27924121
Length = 145
Score = 28.3 bits (60), Expect = 5.4
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Frame = +2
Query: 230 DIDVMADKIRINSRFDQK-ENY---APSDSEDGYSENEKRLLDKVRKRKHESDSEEE 388
D+ V+ DK+R + +K E Y + S++ EK+ D+ K+K E + EEE
Sbjct: 47 DVVVIVDKLRHPKKGKEKREGYMVEVMAVSDEKKEAEEKKKKDEEEKKKKEKEKEEE 103
>12_01_0223 +
1708420-1708512,1708790-1709008,1709117-1709330,
1709901-1710001
Length = 208
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +2
Query: 443 IADSDVEGQEKSDDDLPDSKAW 508
+AD DVE QE DDD D W
Sbjct: 184 LADLDVETQESIDDDDDDDLVW 205
>09_02_0253 -
6319198-6319240,6319364-6319552,6319650-6319995,
6320811-6320893,6320977-6321074,6321384-6321461,
6321891-6322000,6322083-6322180,6323199-6323296,
6323403-6323463,6323688-6323831,6324103-6324206,
6324634-6324787,6324860-6324879,6324967-6325029,
6326521-6326632,6326711-6326796,6326872-6326899,
6327242-6327293,6329034-6329250
Length = 727
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = +2
Query: 158 FATKITLALRSVVLVSI*NILKLYDIDVMADKIRINSRFDQKENYAPSDSEDGYS 322
F T + + +V+L+ L +DV+ D+ R +D Y P E+G S
Sbjct: 439 FTTTTAIVVLTVLLIGGSTGTMLEALDVIGDENRSIENYDDNNGYIPPTYEEGSS 493
>12_01_0220 -
1657554-1657620,1657943-1658109,1658110-1658267,
1658362-1658447,1658559-1658808,1659194-1660320,
1662207-1662351,1663555-1663696,1663775-1663828,
1663914-1663985,1664710-1664778,1664885-1664926,
1665024-1665092,1665257-1665394,1665518-1665628,
1665704-1665836,1666834-1666889,1667191-1667901
Length = 1198
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +2
Query: 275 DQKENYAPSDSEDGYSENEKRLLDKVRKRKHESDSEEE 388
D +E D EDG + E LD V + + EEE
Sbjct: 116 DAEEKSEEEDEEDGEGDEELEELDDVDDEEESEEEEEE 153
>09_04_0087 +
14476539-14476675,14478876-14479635,14479720-14479871,
14479958-14480024,14480632-14480831,14480915-14481068,
14481585-14481669,14481766-14481857,14482575-14482766,
14482867-14482992,14483072-14483125,14483494-14483550,
14484509-14484606,14484703-14485038,14485116-14485203,
14486891-14487016,14487082-14487138,14488054-14488133,
14488228-14488270,14488948-14489034,14489331-14489420,
14489996-14490054,14490141-14490231,14490330-14490495,
14490662-14490755,14491787-14492909
Length = 1537
Score = 27.5 bits (58), Expect = 9.4
Identities = 19/80 (23%), Positives = 35/80 (43%)
Frame = +2
Query: 248 DKIRINSRFDQKENYAPSDSEDGYSENEKRLLDKVRKRKHESDSEEEMYAFXXXXXXXXQ 427
DK + ++KE E+ +NEK DK + K +++ E+E +
Sbjct: 195 DKEEETEKDNEKEK--EDKEEETEKDNEKEKEDKEEETKKDNEKEKEQLMGTDEKEKEKE 252
Query: 428 KDDLGIADSDVEGQEKSDDD 487
K+D + +E +EK D +
Sbjct: 253 KEDEN-EEEKLEEEEKKDKE 271
>06_03_0850 -
25354002-25354391,25354480-25354575,25355352-25355634,
25357213-25357799
Length = 451
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +2
Query: 371 SDSEEEMYAFXXXXXXXXQKDDLGIADSDVEGQEKSDDD 487
+DS++E Y +D +G D D EG + D+D
Sbjct: 84 ADSDDEDYVVGGGDEDQDDEDYVGDGDGDGEGDDDDDED 122
>03_06_0146 - 31976538-31978643,31978653-31978751
Length = 734
Score = 27.5 bits (58), Expect = 9.4
Identities = 19/99 (19%), Positives = 43/99 (43%)
Frame = +2
Query: 272 FDQKENYAPSDSEDGYSENEKRLLDKVRKRKHESDSEEEMYAFXXXXXXXXQKDDLGIAD 451
FD+++ + +D ++E +D + ESD EE+ Y+ D I +
Sbjct: 304 FDEEDIICAENLDDEIFDDE--YVDTGSSDEEESDDEEDSYSDEEIDDEEESDCDEEIDE 361
Query: 452 SDVEGQEKSDDDLPDSKAWGKNKQSYYATDYVDKDYGGF 568
+ E + D D++++G+ + Y ++++ F
Sbjct: 362 EEEEEHGGNKYDAIDNESFGEEESVCMEQSYAEEEWPEF 400
>02_05_0608 +
30329174-30329362,30329681-30329907,30330035-30330190,
30330893-30331078,30331184-30331368,30331571-30331602
Length = 324
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/36 (30%), Positives = 25/36 (69%), Gaps = 2/36 (5%)
Frame = -3
Query: 428 FDLIPRQNQRKHTF--PLHYQTHVFSYVLYPIIAFH 327
++++P +++KH F PLHY +VF+ +L+ ++ +
Sbjct: 254 YEVVPMLDKKKHKFDGPLHY--YVFNCLLFSLLVLN 287
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,763,043
Number of Sequences: 37544
Number of extensions: 203805
Number of successful extensions: 805
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 799
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1549385732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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