Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_E22
(634 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_10018| Best HMM Match : Sas10_Utp3 (HMM E-Value=7.6e-35) 41 0.001
SB_44788| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.012
SB_46960| Best HMM Match : Neuromodulin (HMM E-Value=3.6) 35 0.063
SB_867| Best HMM Match : Leo1 (HMM E-Value=0) 33 0.19
SB_16305| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.34
SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.45
SB_37681| Best HMM Match : SH2 (HMM E-Value=3.5e-11) 31 1.0
SB_45985| Best HMM Match : IQ (HMM E-Value=1.7e-37) 30 1.4
SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_55025| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_45284| Best HMM Match : Nucleoplasmin (HMM E-Value=8.7e-10) 30 1.8
SB_44482| Best HMM Match : RRM_1 (HMM E-Value=0.19) 30 1.8
SB_540| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_12855| Best HMM Match : TPR_2 (HMM E-Value=2.3e-12) 29 2.4
SB_7120| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_13907| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_54| Best HMM Match : Actin (HMM E-Value=0) 29 3.1
SB_43512| Best HMM Match : RNA_pol_delta (HMM E-Value=4.7) 29 3.1
SB_46386| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_41998| Best HMM Match : Nol1_Nop2_Fmu (HMM E-Value=3.2e-16) 29 4.1
SB_53810| Best HMM Match : DUF1542 (HMM E-Value=3.9) 28 5.5
SB_53480| Best HMM Match : Sigma70_r1_1 (HMM E-Value=5.7) 28 7.2
SB_21211| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_14361| Best HMM Match : Dynactin_p62 (HMM E-Value=0.00091) 28 7.2
SB_8887| Best HMM Match : G-patch (HMM E-Value=1.2e-08) 28 7.2
SB_57740| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_56851| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_41045| Best HMM Match : GRP (HMM E-Value=0.35) 28 7.2
SB_4762| Best HMM Match : tRNA-synt_1b (HMM E-Value=0.00013) 28 7.2
SB_3092| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_2198| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_31752| Best HMM Match : Bac_surface_Ag (HMM E-Value=0.0069) 27 9.6
SB_24637| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_21264| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_4831| Best HMM Match : E-MAP-115 (HMM E-Value=1.8) 27 9.6
>SB_10018| Best HMM Match : Sas10_Utp3 (HMM E-Value=7.6e-35)
Length = 430
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 8/71 (11%)
Frame = +2
Query: 368 ESDSEEEMYAFXXXXXXXXQKDDLGIADSDVE---GQEKSDDD-----LPDSKAWGKNKQ 523
E D E E Y + D + D D + G + DDD LP KAWGK K+
Sbjct: 45 EPDPESEDYFKDDVGKFHSKSDKDNVEDDDDDDDGGDDDEDDDGQTEGLPSDKAWGKKKK 104
Query: 524 SYYATDYVDKD 556
+YY D D D
Sbjct: 105 NYYDADVGDAD 115
>SB_44788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 979
Score = 37.1 bits (82), Expect = 0.012
Identities = 20/35 (57%), Positives = 23/35 (65%), Gaps = 4/35 (11%)
Frame = +2
Query: 296 PSDSEDGYSENEKRLLDKVRKRKHE----SDSEEE 388
PSD ED E +KR +K RKRKHE SDSE+E
Sbjct: 725 PSDDEDRKMEKKKRKKEKKRKRKHEQLSYSDSEDE 759
>SB_46960| Best HMM Match : Neuromodulin (HMM E-Value=3.6)
Length = 557
Score = 34.7 bits (76), Expect = 0.063
Identities = 21/74 (28%), Positives = 34/74 (45%)
Frame = +2
Query: 275 DQKENYAPSDSEDGYSENEKRLLDKVRKRKHESDSEEEMYAFXXXXXXXXQKDDLGIADS 454
D +E+ DSED +++ LL + K + ESD + E + D+ G +
Sbjct: 109 DDEESGDDCDSEDDGDDDDDGLLGEEEKNERESDEDVESNNNEDEDIQEVEDDNEGKEND 168
Query: 455 DVEGQEKSDDDLPD 496
E E++DDD D
Sbjct: 169 GGESDEENDDDDED 182
>SB_867| Best HMM Match : Leo1 (HMM E-Value=0)
Length = 591
Score = 33.1 bits (72), Expect = 0.19
Identities = 26/82 (31%), Positives = 38/82 (46%)
Frame = +2
Query: 284 ENYAPSDSEDGYSENEKRLLDKVRKRKHESDSEEEMYAFXXXXXXXXQKDDLGIADSDVE 463
E+ SD +D SE+E R K E+D + M + +D + DS+
Sbjct: 169 EDVFGSDLDD--SEDEDRA-----KSARETDEKARMNELFGDSPSEGEDEDKELKDSESR 221
Query: 464 GQEKSDDDLPDSKAWGKNKQSY 529
G +SD+D D K GKN+ SY
Sbjct: 222 G--RSDEDSGDEKESGKNEGSY 241
>SB_16305| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1122
Score = 32.3 bits (70), Expect = 0.34
Identities = 27/118 (22%), Positives = 50/118 (42%), Gaps = 3/118 (2%)
Frame = +2
Query: 230 DIDVMA-DKIRINSRFDQKENYAPSDSEDGYSE--NEKRLLDKVRKRKHESDSEEEMYAF 400
D+D+ D+ + + DQ E+ D ++ ++ N K DK KR D + ++Y
Sbjct: 273 DVDMHDHDRFEVGKKNDQNESMERGDEKNELNDGRNAKSHKDKYCKRVLR-DEDGDVYNH 331
Query: 401 XXXXXXXXQKDDLGIADSDVEGQEKSDDDLPDSKAWGKNKQSYYATDYVDKDYGGFGD 574
++D G D + +G K+D + + G +++ Y KD GD
Sbjct: 332 EDTIDDGDKED--GNIDENADGFHKNDVENRSNAEKGNENENHCDGSYATKDDAKIGD 387
>SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1805
Score = 31.9 bits (69), Expect = 0.45
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = -3
Query: 548 QHNQWHSMIVYFCPKLLNQVSHRLIFPVLQHHCLLFPNHPFDLIP 414
Q N + M + + + L Q+ + +F + Q CL F NHP +IP
Sbjct: 478 QFNSFEQMCINYTNEKLQQLFNHTMFILEQEECLPFCNHPPMVIP 522
>SB_37681| Best HMM Match : SH2 (HMM E-Value=3.5e-11)
Length = 421
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -3
Query: 569 RSLHNLCQHNQWHSMIVYFCPKLLNQVSHRLIFPVLQHHC 450
++LH L QH +Y+ P LLN + + P LQH C
Sbjct: 327 KTLHELLQHYSQAEQCMYYEPLLLNALPRKNTLP-LQHLC 365
>SB_45985| Best HMM Match : IQ (HMM E-Value=1.7e-37)
Length = 942
Score = 30.3 bits (65), Expect = 1.4
Identities = 27/117 (23%), Positives = 47/117 (40%)
Frame = +2
Query: 227 YDIDVMADKIRINSRFDQKENYAPSDSEDGYSENEKRLLDKVRKRKHESDSEEEMYAFXX 406
+++ A+K S F ++ A + + E +KR + V++ K E + + +
Sbjct: 512 HELQEEAEKNETQSLFFFQQGSAEAKKKREEKEGKKRRKEGVKECKGEEEQNKTDSSSEE 571
Query: 407 XXXXXXQKDDLGIADSDVEGQEKSDDDLPDSKAWGKNKQSYYATDYVDKDYGGFGDD 577
DD ++SD E SDDD K+ S + +D D G DD
Sbjct: 572 SEDELETSDDSSSSESDTSDDE-SDDDHKSEKSSIATDTSEHPSD-SSSDSGDDSDD 626
>SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1926
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/71 (26%), Positives = 31/71 (43%)
Frame = +2
Query: 299 SDSEDGYSENEKRLLDKVRKRKHESDSEEEMYAFXXXXXXXXQKDDLGIADSDVEGQEKS 478
SD ++ ENE + + + KRK + E +K ++ I SD EG++ +
Sbjct: 962 SDKQEESKENEGKEMTRKEKRKKIKE-ERNRRKKERKREKRKKKAEMDIFSSDEEGKKAN 1020
Query: 479 DDDLPDSKAWG 511
DD D G
Sbjct: 1021 DDQFDDQSLEG 1031
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +2
Query: 257 RINSRFDQKENYAPSDSEDGYSENEKRLLDKVRKRKHESDSEEE 388
R+ R + K+ AP + + + + ++V K+K ESD +EE
Sbjct: 924 RVFGRKEAKKEAAPGSAPEQAAAAADKPKEEVNKQKKESDKQEE 967
>SB_55025| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2468
Score = 29.9 bits (64), Expect = 1.8
Identities = 32/117 (27%), Positives = 47/117 (40%), Gaps = 1/117 (0%)
Frame = +2
Query: 230 DIDVMADKIRINSRFDQKENYAPSDSEDGYSENEKRLLDKVRKRKHESDSEEEM-YAFXX 406
D D++ + I D E+ + SDSED ++E D +SD+EE M F
Sbjct: 346 DGDLVEETHYIIEGNDDDES-SSSDSEDDGDDDEGSEGDAEGNHHSDSDNEETMVITFEA 404
Query: 407 XXXXXXQKDDLGIADSDVEGQEKSDDDLPDSKAWGKNKQSYYATDYVDKDYGGFGDD 577
++DD D +V+G D+D D A + D V D DD
Sbjct: 405 DGGHPDEQDDNQHQD-EVDGGHDDDEDDDDDDARHRPHMDESQGDVVVMDEEADDDD 460
>SB_45284| Best HMM Match : Nucleoplasmin (HMM E-Value=8.7e-10)
Length = 282
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +2
Query: 299 SDSEDGYSENEKRLLDKVRKRKHESDSEEEMYAFXXXXXXXXQKDDLGIADSDVEGQEKS 478
SDS++ SE E LDKV++ ++S E + F +D DSD + E
Sbjct: 153 SDSDEEESEEEGMELDKVKQNIYQSLFEFKGNLFDKEAEEASSDED-EEEDSDEDDDEDD 211
Query: 479 DDD 487
DD+
Sbjct: 212 DDE 214
>SB_44482| Best HMM Match : RRM_1 (HMM E-Value=0.19)
Length = 486
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +2
Query: 245 ADKIRINSRFDQKENYAPSDSEDGYSENEKRLLDKVRKRKHESDSEEE 388
A+K SR + YA SDSED R L+K R+ HE S +
Sbjct: 243 AEKEGSRSRRRSPDPYASSDSEDERDRIRWRQLEKERRWPHEQRSRRD 290
>SB_540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 29.9 bits (64), Expect = 1.8
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Frame = +2
Query: 278 QKENYAPSDSEDGYSENEKRLLDKVRKRKHESDSEEEMYAFXXXXXXXXQKDDLGIAD-S 454
+K +++PS SE S++EKR K + RK DS++E +K D + S
Sbjct: 68 KKRHHSPSASE---SDSEKRPKGKEKSRKDADDSDQERDRSKRDKKDRKEKRDRRSKERS 124
Query: 455 DVEGQE-----KSDDDLPDSKAWGKNKQS 526
E +E K ++ PD+K GK+K++
Sbjct: 125 KDESKEERRRSKERENSPDAKK-GKDKEN 152
>SB_12855| Best HMM Match : TPR_2 (HMM E-Value=2.3e-12)
Length = 567
Score = 29.5 bits (63), Expect = 2.4
Identities = 23/92 (25%), Positives = 33/92 (35%)
Frame = +2
Query: 302 DSEDGYSENEKRLLDKVRKRKHESDSEEEMYAFXXXXXXXXQKDDLGIADSDVEGQEKSD 481
D ED Y R + + K +D++ + Y + DD D+D D
Sbjct: 96 DDEDKYVSTPVRYMQNAQYHKDYNDNDYDDYNYDDNDYDNDDYDDYNYDDNDY------D 149
Query: 482 DDLPDSKAWGKNKQSYYATDYVDKDYGGFGDD 577
D D A+ N + Y D DY DD
Sbjct: 150 DVYEDDDAYDDNDYNNYYDDDDYHDYVCENDD 181
>SB_7120| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 559
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Frame = +2
Query: 308 EDGYSENEKRLLDKVRKRKHESDSEEEMYAFXXXXXXXXQKDDLGI--ADSDVEGQEKSD 481
++ E EK + +KRK SD+E E +KD A + +G+EK +
Sbjct: 478 KEAEEEEEKEPKSEKKKRKRTSDNESEKEETTPSKLKKSKKDKKKAKEATEEDDGEEKKE 537
Query: 482 DDLPDSKAWGKNK 520
K GK K
Sbjct: 538 KKKKKKKKKGKEK 550
>SB_13907| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 311
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 278 QKENYAPSDSEDGYSENEK-RLLDKVRKRKHESDSEEEM 391
+K+ SDS D S++E+ R D R+RKH + +E +
Sbjct: 190 KKQRERASDSSDDVSDDERQRKRDHKRRRKHRKEKKERI 228
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 29.1 bits (62), Expect = 3.1
Identities = 20/76 (26%), Positives = 32/76 (42%)
Frame = +2
Query: 272 FDQKENYAPSDSEDGYSENEKRLLDKVRKRKHESDSEEEMYAFXXXXXXXXQKDDLGIAD 451
FD+ +Y PS G +R++D + K + E+ D LGI
Sbjct: 1896 FDEPGDYRPSGEMKGEQRKGQRIIDDLHKPSQQHKDEQ--------LASNSDDDLLGIIG 1947
Query: 452 SDVEGQEKSDDDLPDS 499
S + +S+DD+P S
Sbjct: 1948 SS-DTDSESNDDIPGS 1962
>SB_43512| Best HMM Match : RNA_pol_delta (HMM E-Value=4.7)
Length = 241
Score = 29.1 bits (62), Expect = 3.1
Identities = 24/102 (23%), Positives = 39/102 (38%), Gaps = 1/102 (0%)
Frame = +2
Query: 275 DQKENYAPSDSEDGYSENEKRLLDKVRKRKHESDSEEEMYAFXXXXXXXXQKDDLGIADS 454
D+ + DS+DG E++++ + ++ E +KDD D
Sbjct: 110 DEDDEDDEEDSDDGDDEDDEKESGDGDAGNAKDEASGESDDAKPKTKDAEKKDDKKKVDE 169
Query: 455 DVEGQEKSDDDLPDSKAWGKNKQSYYAT-DYVDKDYGGFGDD 577
E ++K DD D K K A+ + D D G DD
Sbjct: 170 KKEDEKKDDDKKVDEKKEDDKKNDSSASGESEDSDDGDDEDD 211
>SB_46386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 849
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/76 (19%), Positives = 28/76 (36%)
Frame = +2
Query: 260 INSRFDQKENYAPSDSEDGYSENEKRLLDKVRKRKHESDSEEEMYAFXXXXXXXXQKDDL 439
+ + FD + D +GY +++ + D V + D + Y DD
Sbjct: 380 VGNMFDMNNDDDRDDDVEGYGDDDSDIDDDVNDNNDDDDYMMDDYVADNEDDDDDDNDDD 439
Query: 440 GIADSDVEGQEKSDDD 487
D D + + D+D
Sbjct: 440 NDDDDDDDDDDDDDND 455
>SB_41998| Best HMM Match : Nol1_Nop2_Fmu (HMM E-Value=3.2e-16)
Length = 467
Score = 28.7 bits (61), Expect = 4.1
Identities = 27/104 (25%), Positives = 40/104 (38%), Gaps = 1/104 (0%)
Frame = +2
Query: 269 RFDQKENYAPSDSEDGYSE-NEKRLLDKVRKRKHESDSEEEMYAFXXXXXXXXQKDDLGI 445
R+ + + SDSED E ++ ++ + DS +E F DD
Sbjct: 132 RWKKTQQKPVSDSEDDDDEFDDGDDMEDEPSKMLFGDSSDEEIDFSAKSKSKPFSDDNAE 191
Query: 446 ADSDVEGQEKSDDDLPDSKAWGKNKQSYYATDYVDKDYGGFGDD 577
+G +KSD D+PD NK S + D D DD
Sbjct: 192 WLKLADGGDKSDSDMPDEFEDDDNKDSNH-DDESGSDQEAESDD 234
>SB_53810| Best HMM Match : DUF1542 (HMM E-Value=3.9)
Length = 560
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/48 (29%), Positives = 20/48 (41%)
Frame = +2
Query: 431 DDLGIADSDVEGQEKSDDDLPDSKAWGKNKQSYYATDYVDKDYGGFGD 574
DD+ D D+ G +DD+ +S + YY D D G D
Sbjct: 353 DDIYRDDDDINGDNDADDENINSDDDAADDADYYVNSDADDDINGDDD 400
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = +2
Query: 431 DDLGIADSDVEGQEKSDDDLPDSKAWGKNKQSYYATDYVDKDYGG 565
DD+ D D+ G +DD+ +S + YY D D G
Sbjct: 207 DDIYRDDDDINGDNDADDENINSDDDAADDADYYVNSDADDDING 251
>SB_53480| Best HMM Match : Sigma70_r1_1 (HMM E-Value=5.7)
Length = 402
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/47 (31%), Positives = 18/47 (38%)
Frame = +2
Query: 431 DDLGIADSDVEGQEKSDDDLPDSKAWGKNKQSYYATDYVDKDYGGFG 571
DD G D D + + DDD+ D YY D D G G
Sbjct: 255 DDDGYDDDDDDDDDDDDDDVDDGGGGHDGDSDYYNDSGGDDDDDGGG 301
>SB_21211| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 428
Score = 27.9 bits (59), Expect = 7.2
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = +3
Query: 267 QDLTKKRIMPLQIQKMVILKMKSDYWIKYVRENMSLIVKR--KCMLSLILTRNQIKRMIW 440
+D+ K +I LQ + K + + +K +R S + R + SL R IW
Sbjct: 11 RDIYKNKIKQLQQEVDNYKKQEREREMKALRGGRSPMSPRSPEHHKSLKRERRLSGNSIW 70
Query: 441 E*QTVMLKDRKNQTMTYLI 497
E + ++DRKN+T++ L+
Sbjct: 71 EQELQNVRDRKNKTLSQLL 89
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 27.9 bits (59), Expect = 7.2
Identities = 25/111 (22%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
Frame = +2
Query: 176 LALRSVVLVSI*NILKLYDIDVMADKIRINSRFDQKENYAPSDSEDGYSENEK---RLLD 346
L + +++V I ++ + + +M + I FD ++ D + ++ + R L
Sbjct: 319 LIMMMMMVVMIMMMMMVVIVIIMMIILMILRPFDDDDDDDQEDLDGRFAAGQDAMYRPLS 378
Query: 347 KVRKRKHESDSEEEMYAFXXXXXXXXQKDDLGIAD-SDVEGQEKSDDDLPD 496
K ESD E+E+ F +KD I + ++ E Q+ DD+ D
Sbjct: 379 PGNKPNEESDDEDELDKFMKGIEEEVKKDTSKIPNKTEKEKQKARRDDIED 429
>SB_14361| Best HMM Match : Dynactin_p62 (HMM E-Value=0.00091)
Length = 497
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +2
Query: 449 DSDVEGQEKSDDDLPDSKAWGKNKQSYYATDYVDKDYGGF 568
D D +G + +DD+ DS + + DY+D DY F
Sbjct: 134 DGDDDGNDDNDDNNNDSNNNSDDDGNDDTNDYIDVDYNVF 173
>SB_8887| Best HMM Match : G-patch (HMM E-Value=1.2e-08)
Length = 739
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +2
Query: 425 QKDDLGIADSDVEGQEKSDDDLPDSKAWGKNKQSYYATDYVDKDYGGFGD 574
+K G+A D +G + ++DD D + G+ S T+ +D D GD
Sbjct: 306 EKKIKGLAIQDDDGDDDNNDDDNDGYSSGEITDSESDTNVIDDDAAADGD 355
>SB_57740| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 27.9 bits (59), Expect = 7.2
Identities = 22/102 (21%), Positives = 41/102 (40%), Gaps = 2/102 (1%)
Frame = +2
Query: 260 INSRFDQKENYAPSDSEDGYSENEKRLLDKVRKRKHESDSEEEMYAFXXXXXXXXQKDDL 439
++ R D ++ A ++ D D + ++++ D + M DD
Sbjct: 93 VDKRSDDDDSGAKRNNVDDIGAKRNYDDDDIGTKRNDDD-DSGMRMMMVAVTNRNDGDDS 151
Query: 440 GIA--DSDVEGQEKSDDDLPDSKAWGKNKQSYYATDYVDKDY 559
G D D G +++DDD+ +K + + S D D DY
Sbjct: 152 GSKRNDGDGSGTKRNDDDVSGNKLYDDDDSSTKRND--DNDY 191
>SB_56851| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 100
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = +2
Query: 431 DDLGIADSDVEGQEKSDDDLPDSKAWGKNKQSYYATDYVDKDYGGFGDD 577
DD G D D + + DDD D K+ Y D VD D + DD
Sbjct: 43 DDGGSDDDDNDDNDDDDDDYDD-----KDNDDYDNDDDVDDDNDDYDDD 86
>SB_41045| Best HMM Match : GRP (HMM E-Value=0.35)
Length = 158
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/47 (31%), Positives = 18/47 (38%)
Frame = +2
Query: 431 DDLGIADSDVEGQEKSDDDLPDSKAWGKNKQSYYATDYVDKDYGGFG 571
DD G D D + + DDD+ D YY D D G G
Sbjct: 82 DDDGYDDDDDDDDDDDDDDVDDGGGGHDGDSDYYNDSGGDDDDDGGG 128
>SB_4762| Best HMM Match : tRNA-synt_1b (HMM E-Value=0.00013)
Length = 396
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +2
Query: 440 GIADSDVEGQEKSDDDLPDSKAWGKNKQSYYATDYVDKDYGGFGDD 577
G D DV+ + DDD D N + D + D G FGDD
Sbjct: 143 GDVDDDVDDDDNDDDDSSDDDRSDDNGDNDEGDD--NDDDGTFGDD 186
>SB_3092| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 416
Score = 27.9 bits (59), Expect = 7.2
Identities = 20/84 (23%), Positives = 31/84 (36%)
Frame = +2
Query: 299 SDSEDGYSENEKRLLDKVRKRKHESDSEEEMYAFXXXXXXXXQKDDLGIADSDVEGQEKS 478
S+SE Y E K+L + + +YA D A+ E ++
Sbjct: 178 SESEKSYQETTKKL--EASLIVFRDFATTHLYALRTAANCRNVDDPSASAEEKAERKQDL 235
Query: 479 DDDLPDSKAWGKNKQSYYATDYVD 550
D L D K +GK Y Y++
Sbjct: 236 RDTLEDIKRYGKMYHEYAGQAYME 259
>SB_2198| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 962
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 299 SDSEDGYSENEKRLLDKVRKRKHESDSEE 385
SD E YS+ EK L V R H+ ++EE
Sbjct: 731 SDCERRYSQTEKEALGIVWARNHDHEAEE 759
>SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2202
Score = 27.5 bits (58), Expect = 9.6
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = -3
Query: 380 HYQTHVFSYVLYPIIAFHFQNNHLLNLKGHNSLFGQILNLFLFYQPSRRYHKV 222
H + HVF YP + F+ QN LKGH+ L F + RR+H +
Sbjct: 1971 HTREHVFG-AWYPQLGFYAQNVVTKILKGHHDLCDYCPEEF-HSEAFRRHHGI 2021
>SB_31752| Best HMM Match : Bac_surface_Ag (HMM E-Value=0.0069)
Length = 354
Score = 27.5 bits (58), Expect = 9.6
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 5/54 (9%)
Frame = +2
Query: 431 DDLGIADSDVEG-QEKSDDDLPDSKAWGKNKQSYYATDYVDKDYG----GFGDD 577
DD + D DV+ + DDD+ D+ G Y D DYG G GDD
Sbjct: 275 DDECVDDDDVDDVNDNVDDDVDDNGDGGDGGDGDYGDGDGDGDYGDGDYGDGDD 328
>SB_24637| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 90
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +2
Query: 440 GIADSDVEGQEKSDDDLPDSKAWGKNKQSYYATDYVDKDYGGFGDD 577
G +D D +G + DDD D K+ D VD + GG DD
Sbjct: 11 GDSDDDDDGIDDDDDDGGDGGDGDKDGGGGCGDDDVDAEGGGDSDD 56
>SB_21264| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 160
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/62 (22%), Positives = 29/62 (46%)
Frame = +2
Query: 302 DSEDGYSENEKRLLDKVRKRKHESDSEEEMYAFXXXXXXXXQKDDLGIADSDVEGQEKSD 481
D ED E +K +DK+ K + + + +E+M K+++ + D + +E D
Sbjct: 5 DKEDK-DEEDKEEMDKMDKEEMDKEDKEDMEEMDKEEMDQQDKEEMDQEEMDKKDKEDMD 63
Query: 482 DD 487
+
Sbjct: 64 QE 65
>SB_4831| Best HMM Match : E-MAP-115 (HMM E-Value=1.8)
Length = 1151
Score = 27.5 bits (58), Expect = 9.6
Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Frame = +2
Query: 305 SEDGYSENEKRLLDKVRKRKHESDSEEEMYAFXXXXXXXXQKDDLGIADSDVEGQEKSDD 484
SE E ++RL K ++ E E +D L S E +DD
Sbjct: 759 SERKRDERKQRLSAKQERKTTEPSRCSERSKLPSGDTTASSEDGLVTRRSTKRKSESTDD 818
Query: 485 DLPD--SKAWGKNKQS 526
D+P S+A K+K++
Sbjct: 819 DMPSKRSRAHAKDKRA 834
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,302,188
Number of Sequences: 59808
Number of extensions: 263048
Number of successful extensions: 1176
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1165
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1584657875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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