Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_E22
(634 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g16980.1 68414.m02062 alpha, alpha-trehalose-phosphate syntha... 31 0.48
At3g01860.2 68416.m00131 expressed protein 30 1.1
At3g01860.1 68416.m00130 expressed protein 30 1.1
At5g49945.1 68418.m06184 expressed protein strong similarity to ... 29 2.6
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 29 2.6
At5g61330.1 68418.m07696 rRNA processing protein-related contain... 29 3.4
At5g60960.1 68418.m07647 pentatricopeptide (PPR) repeat-containi... 29 3.4
At5g53800.1 68418.m06685 expressed protein 29 3.4
At3g50550.1 68416.m05528 expressed protein isoform contains a n... 29 3.4
At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein ... 29 3.4
At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein ... 29 3.4
At1g15340.1 68414.m01835 methyl-CpG-binding domain-containing pr... 29 3.4
At5g53930.1 68418.m06710 expressed protein 28 4.5
At5g15140.1 68418.m01774 aldose 1-epimerase family protein simil... 28 4.5
At4g24330.1 68417.m03492 expressed protein hypothetical protein ... 28 4.5
At4g11970.2 68417.m01906 YT521-B-like family protein contains Pf... 28 4.5
At4g11970.1 68417.m01905 YT521-B-like family protein contains Pf... 28 4.5
At1g74250.1 68414.m08599 DNAJ heat shock N-terminal domain-conta... 28 4.5
At1g44910.1 68414.m05146 FF domain-containing protein / WW domai... 28 4.5
At5g49400.1 68418.m06113 zinc knuckle (CCHC-type) family protein... 28 5.9
At4g32190.1 68417.m04581 centromeric protein-related low similar... 28 5.9
At4g29230.1 68417.m04181 no apical meristem (NAM) family protein... 28 5.9
At3g29075.1 68416.m03637 glycine-rich protein 28 5.9
At1g70320.1 68414.m08090 ubiquitin-protein ligase 2 (UPL2) nearl... 28 5.9
At3g53640.1 68416.m05925 protein kinase family protein contains ... 27 7.8
At3g15600.1 68416.m01976 hypothetical protein low similarity to ... 27 7.8
At1g03530.1 68414.m00334 expressed protein similar to hypothetic... 27 7.8
>At1g16980.1 68414.m02062 alpha, alpha-trehalose-phosphate synthase,
UDP-forming, putative / trehalose-6-phosphate synthase,
putative / UDP-glucose-glucosephosphate
glucosyltransferase, putative similar to
trehalose-6-phosphate synthase SL-TPS/P [Selaginella
lepidophylla] GI:4100325; contains Pfam profiles
PF00982: Glycosyltransferase family 20, PF02358:
Trehalose-phosphatase
Length = 821
Score = 31.5 bits (68), Expect = 0.48
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +2
Query: 224 LYDIDVMADKIRINSRFDQKENYAPSDSEDGYSENEKRLLDKVRKRKHE 370
L+ + V+AD +S F E Y P D+ +EN KR ++ VR+RK E
Sbjct: 767 LHKLAVVADTTMTDS-FSDSEIYEPRDANA--NENSKRWINSVRRRKVE 812
>At3g01860.2 68416.m00131 expressed protein
Length = 159
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +2
Query: 278 QKENYAPSDSEDGYSENEKRLLDKVRKRKHESDSEEEMY 394
++ + + E ++N+KRLL+ ++ + E D EEE Y
Sbjct: 47 EENKHGEEEEEASPTDNKKRLLELFKETQDEEDEEEEDY 85
>At3g01860.1 68416.m00130 expressed protein
Length = 223
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +2
Query: 278 QKENYAPSDSEDGYSENEKRLLDKVRKRKHESDSEEEMY 394
++ + + E ++N+KRLL+ ++ + E D EEE Y
Sbjct: 111 EENKHGEEEEEASPTDNKKRLLELFKETQDEEDEEEEDY 149
>At5g49945.1 68418.m06184 expressed protein strong similarity to
unknown protein (pir||T09896)
Length = 480
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -3
Query: 284 LFGQILNLFLFYQPSRRY-HKVLKYFKLKLTRHSARLRLF 168
L + LN+F FY RRY H +L +LK +RH R+F
Sbjct: 213 LLKEALNVFKFYASGRRYCHGLLATMELK-SRHDLISRVF 251
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 29.1 bits (62), Expect = 2.6
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 362 KHESDSEEEMYAFXXXXXXXXQKDDLGIADSDVEGQEKSDDDLPDSKA 505
++ D ++EM + DDLG +DSDVE + S++ + D+ A
Sbjct: 10 EYMEDVDDEMEDVEDDMDEEFRGDDLGASDSDVEEFDYSNNKVADTTA 57
>At5g61330.1 68418.m07696 rRNA processing protein-related contains
weak similarity to rRNA processing protein EBP2
(EBNA1-binding protein homolog) (Swiss-Prot:P36049)
[Saccharomyces cerevisiae]
Length = 436
Score = 28.7 bits (61), Expect = 3.4
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = +2
Query: 275 DQKENYAPSDSEDGYSEN--EKRLLDKVRKRKHESDSEEEMYAFXXXXXXXXQKDDLGIA 448
DQ+ A SD+ED + E +D + + ES+ ++E ++DD G +
Sbjct: 22 DQENLKAESDNEDDQLPDGIEDDEVDSMEDDEGESEEDDE---------GDTEEDDEGDS 72
Query: 449 DSDVEGQEKSDDD 487
+ D EG+ K D+D
Sbjct: 73 EEDDEGENKEDED 85
>At5g60960.1 68418.m07647 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 521
Score = 28.7 bits (61), Expect = 3.4
Identities = 10/23 (43%), Positives = 19/23 (82%)
Frame = +3
Query: 324 KMKSDYWIKYVRENMSLIVKRKC 392
KM++DY +K +E+++L+VK+ C
Sbjct: 200 KMENDYGLKRDKESLTLVVKKLC 222
>At5g53800.1 68418.m06685 expressed protein
Length = 351
Score = 28.7 bits (61), Expect = 3.4
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 299 SDSEDGYSENEKRLLDKVRKRKHESDSEEE 388
SDSE+ SE+E+R + RK + E + E +
Sbjct: 119 SDSEESESEDERRRRKRKRKEREEEEKERK 148
>At3g50550.1 68416.m05528 expressed protein isoform contains a
non-consensus AT donor site at intron 1
Length = 95
Score = 28.7 bits (61), Expect = 3.4
Identities = 21/85 (24%), Positives = 34/85 (40%)
Frame = +2
Query: 242 MADKIRINSRFDQKENYAPSDSEDGYSENEKRLLDKVRKRKHESDSEEEMYAFXXXXXXX 421
MAD+ I + E Y D +D ++ E D + ++ S + E +
Sbjct: 1 MADEKEIVDIYSSDEEYDEDDDDDDDTDGESSDEDDEEEDRNLSGDDSES-SEDDYTDSN 59
Query: 422 XQKDDLGIADSDVEGQEKSDDDLPD 496
DD D D E +E+ +D L D
Sbjct: 60 SDSDDDDEEDDDDEEEEEEEDSLVD 84
>At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 412
Score = 28.7 bits (61), Expect = 3.4
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +2
Query: 428 KDDLGIADSDVEGQEKSDDDLPDSKAWGKNKQSYYATDYVDKDYGGFGD 574
KD+ G+ D D + K DDD S + G K++ KD G GD
Sbjct: 155 KDNTGLGDGDKDNTCKGDDDKEKSGSGGCEKEN-EGNGGSGKDNNGNGD 202
>At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 324
Score = 28.7 bits (61), Expect = 3.4
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +2
Query: 428 KDDLGIADSDVEGQEKSDDDLPDSKAWGKNKQSYYATDYVDKDYGGFGD 574
KD+ G+ D D + K DDD S + G K++ KD G GD
Sbjct: 67 KDNTGLGDGDKDNTCKGDDDKEKSGSGGCEKEN-EGNGGSGKDNNGNGD 114
>At1g15340.1 68414.m01835 methyl-CpG-binding domain-containing
protein contains Pfam profile PF01429: Methyl-CpG
binding domain
Length = 384
Score = 28.7 bits (61), Expect = 3.4
Identities = 11/52 (21%), Positives = 28/52 (53%)
Frame = +2
Query: 230 DIDVMADKIRINSRFDQKENYAPSDSEDGYSENEKRLLDKVRKRKHESDSEE 385
D D ADK + + +D+K A ++ E+ E++++ + +++E+ +
Sbjct: 291 DADAEADKGKESKEYDEKTTEAEANKENDTQESDEKKTEAAANKENETQESD 342
>At5g53930.1 68418.m06710 expressed protein
Length = 529
Score = 28.3 bits (60), Expect = 4.5
Identities = 20/86 (23%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Frame = +2
Query: 266 SRFDQKENYAPSDSEDGYSENEKRLLDKVR-KRKHESDSEEEMYAFXXXXXXXXQKDDLG 442
S+ ++ Y+ S+S+D S++++ L K R KRK E+ +++ +K DL
Sbjct: 69 SKKRSRKRYSSSESDDD-SDDDRLLKKKKRSKRKDENVGKKK----KKVVSRKRRKRDLS 123
Query: 443 IADSDVEGQEKSDDDLPDSKAWGKNK 520
+ + E + + D K W +++
Sbjct: 124 SSSTSSEQSDNDGSESDDGKRWSRDR 149
>At5g15140.1 68418.m01774 aldose 1-epimerase family protein similar
to SP|P05149 Aldose 1-epimerase precursor (EC 5.1.3.3)
(Mutarotase) from Acinetobacter calcoaceticus; contains
Pfam profile PF01263 Aldose 1-epimerase
Length = 490
Score = 28.3 bits (60), Expect = 4.5
Identities = 16/63 (25%), Positives = 28/63 (44%)
Frame = +2
Query: 308 EDGYSENEKRLLDKVRKRKHESDSEEEMYAFXXXXXXXXQKDDLGIADSDVEGQEKSDDD 487
E+ ++EK+ +DK + H+ D ++E DD +D D + + DDD
Sbjct: 87 ENKDKDDEKKHVDKKKSGGHDKDDDDEKKHKDKKKDGHNDDDD---SDDDTDDDDDDDDD 143
Query: 488 LPD 496
D
Sbjct: 144 DDD 146
>At4g24330.1 68417.m03492 expressed protein hypothetical protein -
Caenorhabditis elegans,PID:e1350884
Length = 478
Score = 28.3 bits (60), Expect = 4.5
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -3
Query: 284 LFGQILNLFLFYQPSRRY-HKVLKYFKLKLTRHSARLRLF 168
L + N+F FY RRY H +L +LK +RH RLF
Sbjct: 211 LLKEATNVFKFYASGRRYCHGLLATLELK-SRHDLISRLF 249
>At4g11970.2 68417.m01906 YT521-B-like family protein contains Pfam
profile PF04146: YT521-B-like family
Length = 359
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +2
Query: 428 KDDLGIADSDVEGQEKSDDDLPDSKAWGKNKQSYYATDYVDKD 556
+DD S E S DD ++ WG SY T Y ++D
Sbjct: 222 RDDYSTKRSRAEPPSSSGDDEYNNNLWGHTPMSYPPTVYPNQD 264
>At4g11970.1 68417.m01905 YT521-B-like family protein contains Pfam
profile PF04146: YT521-B-like family
Length = 444
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +2
Query: 428 KDDLGIADSDVEGQEKSDDDLPDSKAWGKNKQSYYATDYVDKD 556
+DD S E S DD ++ WG SY T Y ++D
Sbjct: 222 RDDYSTKRSRAEPPSSSGDDEYNNNLWGHTPMSYPPTVYPNQD 264
>At1g74250.1 68414.m08599 DNAJ heat shock N-terminal
domain-containing protein contains Pfam domains PF00226:
DnaJ domain and PF00096: Zinc finger, C2H2 type
Length = 630
Score = 28.3 bits (60), Expect = 4.5
Identities = 22/100 (22%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Frame = +2
Query: 275 DQKENYAPSDSEDGYSENEKRLLDKVRKRKHESDSEEEMYAFXXXXXXXXQKDDLGIADS 454
+++E P DS + E ++L +++ E D ++E+ D+ +A+
Sbjct: 351 EEEEIDGPLDSPESVEELHEKLQEELNIDNEERDVKKEVVG-----EADETDDEYFVAEE 405
Query: 455 DVEGQEKSDDD------LPDSKAWGKNKQSYYATDYVDKD 556
D++G +S+D+ L + KNKQ + D+D
Sbjct: 406 DMQGSSESEDEDDEMTLLKKMVSGQKNKQKNVVSKEEDED 445
>At1g44910.1 68414.m05146 FF domain-containing protein / WW
domain-containing protein contains Pfam profiles
PF01846: FF domain, PF00397: WW domain
Length = 946
Score = 28.3 bits (60), Expect = 4.5
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +2
Query: 248 DKIRINSRFDQKENYAPSDSEDGYSENEK-RLLDKVRKRKHESDSEEEM 391
+K+R D+KE D E E E+ + K R ++ ESD E M
Sbjct: 804 EKVRKEKERDEKEKRKDKDKERREKEREREKEKGKERSKREESDGETAM 852
>At5g49400.1 68418.m06113 zinc knuckle (CCHC-type) family protein
contains Pfam domain, PF00098: Zinc knuckle
Length = 275
Score = 27.9 bits (59), Expect = 5.9
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +2
Query: 275 DQKENYAPSDSEDGYSENEKRLLDKVRKRKHESDSEEEMYA 397
D E P D+ +G +E EKR RK + +SDSE + A
Sbjct: 148 DDDEEERP-DATNGKAEVEKRSKKSKRKHRSKSDSESDSEA 187
>At4g32190.1 68417.m04581 centromeric protein-related low similarity
to SP|Q02224 Centromeric protein E (CENP-E protein)
{Homo sapiens}
Length = 783
Score = 27.9 bits (59), Expect = 5.9
Identities = 18/76 (23%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Frame = +2
Query: 287 NYAPSDSEDGYSENEKRLLDKVRKRKHESDSEEEMYAFXXXXXXXXQKDDLGIADSDVEG 466
N P+ +++G +E+ L DK+ R H + + ++ +LG+ +SD+E
Sbjct: 58 NTRPNINDNGSAESANVLFDKLFARTHRLERQTNQHSVYPDDDDLPY-SNLGVLESDLEA 116
Query: 467 Q----EKSDDDLPDSK 502
K ++DL D++
Sbjct: 117 ALVALLKREEDLHDAE 132
>At4g29230.1 68417.m04181 no apical meristem (NAM) family protein
similar to NAM family proteins GP|12751304|,
GP|6223650|, GP|9758909 - Arabidopsis
thaliana,PIR2:T04621
Length = 498
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -3
Query: 413 RQNQRKHTFPLHYQTHVFSYVLYPIIAFHFQNNHLLN 303
+Q QR H F + TH S ++ P + H + ++L+
Sbjct: 368 QQQQRHHAFNISQPTHPISTIISPSTSLHHASINILD 404
>At3g29075.1 68416.m03637 glycine-rich protein
Length = 294
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Frame = +2
Query: 278 QKENYAPSDSEDGYSENEKRLL-----DKVRKRKHESDSEEE 388
+KE Y +D Y E +K+ D+ +K+KH +D ++E
Sbjct: 189 KKEQYKEHHDDDDYDEKKKKKKDYNDDDEKKKKKHYNDDDDE 230
>At1g70320.1 68414.m08090 ubiquitin-protein ligase 2 (UPL2) nearly
identical to ubiquitin-protein ligase 2 [Arabidopsis
thaliana] GI:7108523; E3, HECT-domain protein family;
similar to ubiquitin-protein ligase 2 GI:7108523 from
[Arabidopsis thaliana]
Length = 3658
Score = 27.9 bits (59), Expect = 5.9
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +2
Query: 449 DSDVEGQE-KSDDDLPDSKAWGKNKQSYYATDYVDKDYGGFGDD 577
D D EG++ + DD+ DS G S TD D + G GD+
Sbjct: 2125 DMDDEGEDDEGDDEDADSVEDGAGVMSIAGTDVEDPEDTGLGDE 2168
>At3g53640.1 68416.m05925 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 642
Score = 27.5 bits (58), Expect = 7.8
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +2
Query: 239 VMADKIRINSRFDQKENYAPSDSEDGYSENEKRLLDKVRKRKH--ESDSEEEMYAF 400
+++DKI +S + +Y+PSD S+ K K R H E +E+ +Y F
Sbjct: 1 MVSDKIVESSHRKHRRSYSPSDEVVKSSKRHKHHHHKHRHSHHLDEDGNEKNVYPF 56
>At3g15600.1 68416.m01976 hypothetical protein low similarity to KED
[Nicotiana tabacum] GI:8096269; contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 591
Score = 27.5 bits (58), Expect = 7.8
Identities = 17/81 (20%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = +2
Query: 263 NSRFDQKENYAPSDSEDGYSENEKRLLDKVRKRK-HESDSEEEMYAFXXXXXXXXQKDDL 439
+ D KEN S D +E +K + ++R+ E+++E + + ++
Sbjct: 391 SKEIDDKENELEEGS-DAETEIDKEVAQGDKEREVGETETEIDKEVVQCDSDKEVAESEI 449
Query: 440 GIADSDVEGQEKSDDDLPDSK 502
G+A+S+ + + DD++ K
Sbjct: 450 GVAESEKDKEVPQDDEMDGGK 470
>At1g03530.1 68414.m00334 expressed protein similar to hypothetical
protein GB:O14360
Length = 797
Score = 27.5 bits (58), Expect = 7.8
Identities = 18/88 (20%), Positives = 36/88 (40%), Gaps = 2/88 (2%)
Frame = +2
Query: 263 NSRFDQKENYAPSDSEDGYSENEKRLLDKVRKRKHESDSEEEMYAFXXXXXXXXQK--DD 436
+S ++ + + E E++K K K +H +E+ A + DD
Sbjct: 253 SSSASSSDSSSSEEEESDEDESDKEENKKEEKFEHMVVGKEDDLAGDLKRNLDEENGDDD 312
Query: 437 LGIADSDVEGQEKSDDDLPDSKAWGKNK 520
+ D D + + DDD+ + AW ++
Sbjct: 313 IEDEDDDDDDDDDDDDDVNEMVAWSNDE 340
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,198,721
Number of Sequences: 28952
Number of extensions: 185376
Number of successful extensions: 829
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 819
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1295224128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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