BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_E20
(517 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X68836-1|CAA48726.1| 395|Homo sapiens S-adenosylmethionine synt... 273 3e-73
DQ083239-1|AAY85355.1| 395|Homo sapiens methionine adenosyltran... 273 3e-73
BC001854-1|AAH01854.1| 395|Homo sapiens methionine adenosyltran... 273 3e-73
BC001686-1|AAH01686.1| 395|Homo sapiens methionine adenosyltran... 273 3e-73
AC016753-1|AAY24339.1| 395|Homo sapiens unknown protein. 273 3e-73
X69078-1|CAA48822.1| 395|Homo sapiens methionine adenosyltransf... 263 3e-70
D49357-1|BAA08355.1| 395|Homo sapiens S-adenosylmethionine synt... 263 3e-70
BC018359-1|AAH18359.1| 395|Homo sapiens methionine adenosyltran... 263 3e-70
AL359195-2|CAI13695.1| 395|Homo sapiens methionine adenosyltran... 263 3e-70
AL359195-3|CAI13696.1| 145|Homo sapiens methionine adenosyltran... 117 3e-26
U30872-1|AAA82935.1| 3113|Homo sapiens mitosin protein. 29 9.7
U19769-1|AAA82889.1| 3210|Homo sapiens CENP-F kinetochore protei... 29 9.7
AY358555-1|AAQ88919.1| 1211|Homo sapiens Patched 2 protein. 29 9.7
AL445666-1|CAH71810.1| 3114|Homo sapiens centromere protein F, 3... 29 9.7
AL445305-6|CAH73032.1| 3114|Homo sapiens centromere protein F, 3... 29 9.7
>X68836-1|CAA48726.1| 395|Homo sapiens S-adenosylmethionine
synthetase protein.
Length = 395
Score = 273 bits (669), Expect = 3e-73
Identities = 126/159 (79%), Positives = 143/159 (89%), Gaps = 1/159 (0%)
Frame = +3
Query: 42 QTNG-HSYXMEAGSVFLFTSESVGEGHPXKMCDQISDAILDAHLNQDPDAKVACETITKT 218
Q NG H +E G+ FLFTSESVGEGHP K+CDQISDA+LDAHL QDPDAKVACET+ KT
Sbjct: 4 QLNGFHEAFIEEGT-FLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKT 62
Query: 219 GMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVH 398
GM+LL GEITS+A VDYQKVVRE VKHIGYDDSSKGFDYKTC+V++AL+QQSP+IA GVH
Sbjct: 63 GMILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGVH 122
Query: 399 ENRNDEEVGAGDQGLMFGYATDETEECMPLTVXLAHKLN 515
+RN+E++GAGDQGLMFGYATDETEECMPLT+ LAHKLN
Sbjct: 123 LDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLN 161
>DQ083239-1|AAY85355.1| 395|Homo sapiens methionine
adenosyltransferase II protein.
Length = 395
Score = 273 bits (669), Expect = 3e-73
Identities = 126/159 (79%), Positives = 143/159 (89%), Gaps = 1/159 (0%)
Frame = +3
Query: 42 QTNG-HSYXMEAGSVFLFTSESVGEGHPXKMCDQISDAILDAHLNQDPDAKVACETITKT 218
Q NG H +E G+ FLFTSESVGEGHP K+CDQISDA+LDAHL QDPDAKVACET+ KT
Sbjct: 4 QLNGFHEAFIEEGT-FLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKT 62
Query: 219 GMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVH 398
GM+LL GEITS+A VDYQKVVRE VKHIGYDDSSKGFDYKTC+V++AL+QQSP+IA GVH
Sbjct: 63 GMILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGVH 122
Query: 399 ENRNDEEVGAGDQGLMFGYATDETEECMPLTVXLAHKLN 515
+RN+E++GAGDQGLMFGYATDETEECMPLT+ LAHKLN
Sbjct: 123 LDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLN 161
>BC001854-1|AAH01854.1| 395|Homo sapiens methionine
adenosyltransferase II, alpha protein.
Length = 395
Score = 273 bits (669), Expect = 3e-73
Identities = 126/159 (79%), Positives = 143/159 (89%), Gaps = 1/159 (0%)
Frame = +3
Query: 42 QTNG-HSYXMEAGSVFLFTSESVGEGHPXKMCDQISDAILDAHLNQDPDAKVACETITKT 218
Q NG H +E G+ FLFTSESVGEGHP K+CDQISDA+LDAHL QDPDAKVACET+ KT
Sbjct: 4 QLNGFHEAFIEEGT-FLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKT 62
Query: 219 GMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVH 398
GM+LL GEITS+A VDYQKVVRE VKHIGYDDSSKGFDYKTC+V++AL+QQSP+IA GVH
Sbjct: 63 GMILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGVH 122
Query: 399 ENRNDEEVGAGDQGLMFGYATDETEECMPLTVXLAHKLN 515
+RN+E++GAGDQGLMFGYATDETEECMPLT+ LAHKLN
Sbjct: 123 LDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLN 161
>BC001686-1|AAH01686.1| 395|Homo sapiens methionine
adenosyltransferase II, alpha protein.
Length = 395
Score = 273 bits (669), Expect = 3e-73
Identities = 126/159 (79%), Positives = 143/159 (89%), Gaps = 1/159 (0%)
Frame = +3
Query: 42 QTNG-HSYXMEAGSVFLFTSESVGEGHPXKMCDQISDAILDAHLNQDPDAKVACETITKT 218
Q NG H +E G+ FLFTSESVGEGHP K+CDQISDA+LDAHL QDPDAKVACET+ KT
Sbjct: 4 QLNGFHEAFIEEGT-FLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKT 62
Query: 219 GMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVH 398
GM+LL GEITS+A VDYQKVVRE VKHIGYDDSSKGFDYKTC+V++AL+QQSP+IA GVH
Sbjct: 63 GMILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGVH 122
Query: 399 ENRNDEEVGAGDQGLMFGYATDETEECMPLTVXLAHKLN 515
+RN+E++GAGDQGLMFGYATDETEECMPLT+ LAHKLN
Sbjct: 123 LDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLN 161
>AC016753-1|AAY24339.1| 395|Homo sapiens unknown protein.
Length = 395
Score = 273 bits (669), Expect = 3e-73
Identities = 126/159 (79%), Positives = 143/159 (89%), Gaps = 1/159 (0%)
Frame = +3
Query: 42 QTNG-HSYXMEAGSVFLFTSESVGEGHPXKMCDQISDAILDAHLNQDPDAKVACETITKT 218
Q NG H +E G+ FLFTSESVGEGHP K+CDQISDA+LDAHL QDPDAKVACET+ KT
Sbjct: 4 QLNGFHEAFIEEGT-FLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKT 62
Query: 219 GMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVH 398
GM+LL GEITS+A VDYQKVVRE VKHIGYDDSSKGFDYKTC+V++AL+QQSP+IA GVH
Sbjct: 63 GMILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGVH 122
Query: 399 ENRNDEEVGAGDQGLMFGYATDETEECMPLTVXLAHKLN 515
+RN+E++GAGDQGLMFGYATDETEECMPLT+ LAHKLN
Sbjct: 123 LDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLN 161
>X69078-1|CAA48822.1| 395|Homo sapiens methionine
adenosyltransferase protein.
Length = 395
Score = 263 bits (644), Expect = 3e-70
Identities = 117/145 (80%), Positives = 136/145 (93%)
Frame = +3
Query: 81 VFLFTSESVGEGHPXKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKAN 260
VF+FTSESVGEGHP K+CDQISDA+LDAHL QDP+AKVACET+ KTGMVLLCGEITS A
Sbjct: 17 VFMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCGEITSMAM 76
Query: 261 VDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQG 440
VDYQ+VVR+T+KHIGYDDS+KGFD+KTC+V++AL+QQSP+IA VH +RN+E+VGAGDQG
Sbjct: 77 VDYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCVHLDRNEEDVGAGDQG 136
Query: 441 LMFGYATDETEECMPLTVXLAHKLN 515
LMFGYATDETEECMPLT+ LAHKLN
Sbjct: 137 LMFGYATDETEECMPLTIILAHKLN 161
>D49357-1|BAA08355.1| 395|Homo sapiens S-adenosylmethionine
synthetase protein.
Length = 395
Score = 263 bits (644), Expect = 3e-70
Identities = 117/145 (80%), Positives = 136/145 (93%)
Frame = +3
Query: 81 VFLFTSESVGEGHPXKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKAN 260
VF+FTSESVGEGHP K+CDQISDA+LDAHL QDP+AKVACET+ KTGMVLLCGEITS A
Sbjct: 17 VFMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCGEITSMAM 76
Query: 261 VDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQG 440
VDYQ+VVR+T+KHIGYDDS+KGFD+KTC+V++AL+QQSP+IA VH +RN+E+VGAGDQG
Sbjct: 77 VDYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCVHLDRNEEDVGAGDQG 136
Query: 441 LMFGYATDETEECMPLTVXLAHKLN 515
LMFGYATDETEECMPLT+ LAHKLN
Sbjct: 137 LMFGYATDETEECMPLTIILAHKLN 161
>BC018359-1|AAH18359.1| 395|Homo sapiens methionine
adenosyltransferase I, alpha protein.
Length = 395
Score = 263 bits (644), Expect = 3e-70
Identities = 117/145 (80%), Positives = 136/145 (93%)
Frame = +3
Query: 81 VFLFTSESVGEGHPXKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKAN 260
VF+FTSESVGEGHP K+CDQISDA+LDAHL QDP+AKVACET+ KTGMVLLCGEITS A
Sbjct: 17 VFMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCGEITSMAM 76
Query: 261 VDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQG 440
VDYQ+VVR+T+KHIGYDDS+KGFD+KTC+V++AL+QQSP+IA VH +RN+E+VGAGDQG
Sbjct: 77 VDYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCVHLDRNEEDVGAGDQG 136
Query: 441 LMFGYATDETEECMPLTVXLAHKLN 515
LMFGYATDETEECMPLT+ LAHKLN
Sbjct: 137 LMFGYATDETEECMPLTIILAHKLN 161
>AL359195-2|CAI13695.1| 395|Homo sapiens methionine
adenosyltransferase I, alpha protein.
Length = 395
Score = 263 bits (644), Expect = 3e-70
Identities = 117/145 (80%), Positives = 136/145 (93%)
Frame = +3
Query: 81 VFLFTSESVGEGHPXKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKAN 260
VF+FTSESVGEGHP K+CDQISDA+LDAHL QDP+AKVACET+ KTGMVLLCGEITS A
Sbjct: 17 VFMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCGEITSMAM 76
Query: 261 VDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQG 440
VDYQ+VVR+T+KHIGYDDS+KGFD+KTC+V++AL+QQSP+IA VH +RN+E+VGAGDQG
Sbjct: 77 VDYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCVHLDRNEEDVGAGDQG 136
Query: 441 LMFGYATDETEECMPLTVXLAHKLN 515
LMFGYATDETEECMPLT+ LAHKLN
Sbjct: 137 LMFGYATDETEECMPLTIILAHKLN 161
>AL359195-3|CAI13696.1| 145|Homo sapiens methionine
adenosyltransferase I, alpha protein.
Length = 145
Score = 117 bits (281), Expect = 3e-26
Identities = 53/76 (69%), Positives = 66/76 (86%), Gaps = 3/76 (3%)
Frame = +3
Query: 297 HIGYDDSSK---GFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGLMFGYATDE 467
H+ D ++K GFD+KTC+V++AL+QQSP+IA VH +RN+E+VGAGDQGLMFGYATDE
Sbjct: 23 HLKQDPNAKVACGFDFKTCNVLVALEQQSPDIAQCVHLDRNEEDVGAGDQGLMFGYATDE 82
Query: 468 TEECMPLTVXLAHKLN 515
TEECMPLT+ LAHKLN
Sbjct: 83 TEECMPLTIILAHKLN 98
Score = 72.9 bits (171), Expect = 6e-13
Identities = 41/81 (50%), Positives = 48/81 (59%)
Frame = +3
Query: 99 ESVGEGHPXKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANVDYQKV 278
ESVGEGHP K+CDQISDA+LDAHL QDP+AKVAC KT VL+ E S +
Sbjct: 1 ESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACGFDFKTCNVLVALEQQSPDIAQCVHL 60
Query: 279 VRETVKHIGYDDSSKGFDYKT 341
R + +G D F Y T
Sbjct: 61 DRNE-EDVGAGDQGLMFGYAT 80
>U30872-1|AAA82935.1| 3113|Homo sapiens mitosin protein.
Length = 3113
Score = 29.1 bits (62), Expect = 9.7
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 7 ACRXLQKCMDTRKPTDTVMXWKLDQYFCSHRNLLARV 117
AC L+K + K ++ + KL+ + C H+ LL RV
Sbjct: 1823 ACIELEKIVGELKKENSDLSEKLEYFSCDHQELLQRV 1859
>U19769-1|AAA82889.1| 3210|Homo sapiens CENP-F kinetochore protein
protein.
Length = 3210
Score = 29.1 bits (62), Expect = 9.7
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 7 ACRXLQKCMDTRKPTDTVMXWKLDQYFCSHRNLLARV 117
AC L+K + K ++ + KL+ + C H+ LL RV
Sbjct: 1920 ACIELEKIVGELKKENSDLSEKLEYFSCDHQELLQRV 1956
>AY358555-1|AAQ88919.1| 1211|Homo sapiens Patched 2 protein.
Length = 1211
Score = 29.1 bits (62), Expect = 9.7
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = -1
Query: 451 PNIKPWSPAPTSSSFLFSCTPAAMFGD 371
P+ PWSPA TSS L S P GD
Sbjct: 1178 PDEPPWSPAATSSGNLSSRGPGPATGD 1204
>AL445666-1|CAH71810.1| 3114|Homo sapiens centromere protein F,
350/400ka (mitosin) protein.
Length = 3114
Score = 29.1 bits (62), Expect = 9.7
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 7 ACRXLQKCMDTRKPTDTVMXWKLDQYFCSHRNLLARV 117
AC L+K + K ++ + KL+ + C H+ LL RV
Sbjct: 1824 ACIELEKIVGELKKENSDLSEKLEYFSCDHQELLQRV 1860
>AL445305-6|CAH73032.1| 3114|Homo sapiens centromere protein F,
350/400ka (mitosin) protein.
Length = 3114
Score = 29.1 bits (62), Expect = 9.7
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 7 ACRXLQKCMDTRKPTDTVMXWKLDQYFCSHRNLLARV 117
AC L+K + K ++ + KL+ + C H+ LL RV
Sbjct: 1824 ACIELEKIVGELKKENSDLSEKLEYFSCDHQELLQRV 1860
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,293,044
Number of Sequences: 237096
Number of extensions: 1801181
Number of successful extensions: 3522
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3522
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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