Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_E20
(517 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical pr... 250 3e-67
U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical pr... 250 3e-67
U56963-9|AAB38126.2| 404|Caenorhabditis elegans Temporarily ass... 248 2e-66
Z81485-1|CAB03975.1| 403|Caenorhabditis elegans Hypothetical pr... 244 4e-65
U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical pr... 164 4e-41
U56963-10|AAM97949.1| 353|Caenorhabditis elegans Temporarily as... 161 2e-40
U41009-5|AAO44915.1| 173|Caenorhabditis elegans Hypothetical pr... 146 1e-35
AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical... 116 1e-26
AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical... 112 1e-25
U41009-7|AAN84884.1| 51|Caenorhabditis elegans Hypothetical pr... 77 8e-15
U41009-6|AAK68167.2| 84|Caenorhabditis elegans Hypothetical pr... 42 3e-04
Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical pr... 32 0.21
Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical pr... 32 0.21
AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein. 32 0.21
U49956-1|AAO38615.1| 669|Caenorhabditis elegans Hypothetical pr... 28 3.4
AL132898-18|CAC14411.2| 417|Caenorhabditis elegans Hypothetical... 28 3.4
U28991-14|AAA68388.1| 352|Caenorhabditis elegans Hypothetical p... 28 4.6
U28991-13|AAA68387.1| 281|Caenorhabditis elegans Hypothetical p... 28 4.6
AF016681-20|AAB66167.1| 370|Caenorhabditis elegans Hypothetical... 27 6.0
AF000198-4|AAB53058.2| 175|Caenorhabditis elegans Hypothetical ... 27 6.0
>U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.1a protein.
Length = 404
Score = 250 bits (613), Expect = 3e-67
Identities = 112/144 (77%), Positives = 130/144 (90%)
Frame = +3
Query: 84 FLFTSESVGEGHPXKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 263
FLFTSESV EGHP KMCDQISDA+LDAHL QDP AKVACET+TKTGM++LCGEITSKA V
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVV 65
Query: 264 DYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGL 443
DYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGDQG+
Sbjct: 66 DYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGI 125
Query: 444 MFGYATDETEECMPLTVXLAHKLN 515
MFGYATDETEE MPLT+ L+HKLN
Sbjct: 126 MFGYATDETEEAMPLTLLLSHKLN 149
>U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.3a protein.
Length = 404
Score = 250 bits (613), Expect = 3e-67
Identities = 112/144 (77%), Positives = 130/144 (90%)
Frame = +3
Query: 84 FLFTSESVGEGHPXKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 263
FLFTSESV EGHP KMCDQISDA+LDAHL QDP AKVACET+TKTGM++LCGEITSKA V
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVV 65
Query: 264 DYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGL 443
DYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGDQG+
Sbjct: 66 DYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGI 125
Query: 444 MFGYATDETEECMPLTVXLAHKLN 515
MFGYATDETEE MPLT+ L+HKLN
Sbjct: 126 MFGYATDETEEAMPLTLLLSHKLN 149
>U56963-9|AAB38126.2| 404|Caenorhabditis elegans Temporarily
assigned gene nameprotein 32, isoform a protein.
Length = 404
Score = 248 bits (607), Expect = 2e-66
Identities = 112/144 (77%), Positives = 129/144 (89%)
Frame = +3
Query: 84 FLFTSESVGEGHPXKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 263
FLFTSESV EGHP KMCDQISDA+LDAHL QDP AKVACET+TKTGM++LCGEITSKA V
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVV 65
Query: 264 DYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGL 443
DYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH +++ +VGAGDQG+
Sbjct: 66 DYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHVDKDIADVGAGDQGI 125
Query: 444 MFGYATDETEECMPLTVXLAHKLN 515
MFGYATDETEE MPLT+ L+HKLN
Sbjct: 126 MFGYATDETEEAMPLTLLLSHKLN 149
>Z81485-1|CAB03975.1| 403|Caenorhabditis elegans Hypothetical
protein C49F5.1 protein.
Length = 403
Score = 244 bits (596), Expect = 4e-65
Identities = 110/146 (75%), Positives = 130/146 (89%)
Frame = +3
Query: 78 SVFLFTSESVGEGHPXKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKA 257
S FLFTSESV EGHP KMCDQISDA+LDAHL QDP+AKVACET+TKTGMV+LCGEITSKA
Sbjct: 3 SKFLFTSESVSEGHPDKMCDQISDAVLDAHLKQDPNAKVACETVTKTGMVMLCGEITSKA 62
Query: 258 NVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQ 437
VDYQ +VR ++ IG+ DSS GFD+KTC+V++AL+QQSP IAAGVH N++ E+VGAGDQ
Sbjct: 63 VVDYQVLVRRVIEKIGFTDSSIGFDHKTCNVLVALEQQSPEIAAGVHVNKDGEDVGAGDQ 122
Query: 438 GLMFGYATDETEECMPLTVXLAHKLN 515
G+MFGYATDETEE MPLT+ L+HK+N
Sbjct: 123 GIMFGYATDETEETMPLTLILSHKIN 148
>U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical
protein C06E7.3b protein.
Length = 353
Score = 164 bits (398), Expect = 4e-41
Identities = 72/98 (73%), Positives = 88/98 (89%)
Frame = +3
Query: 222 MVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHE 401
M++LCGEITSKA VDYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH
Sbjct: 1 MIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHV 60
Query: 402 NRNDEEVGAGDQGLMFGYATDETEECMPLTVXLAHKLN 515
+++ ++VGAGDQG+MFGYATDETEE MPLT+ L+HKLN
Sbjct: 61 DKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLN 98
>U56963-10|AAM97949.1| 353|Caenorhabditis elegans Temporarily
assigned gene nameprotein 32, isoform b protein.
Length = 353
Score = 161 bits (392), Expect = 2e-40
Identities = 72/98 (73%), Positives = 87/98 (88%)
Frame = +3
Query: 222 MVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHE 401
M++LCGEITSKA VDYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH
Sbjct: 1 MIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHV 60
Query: 402 NRNDEEVGAGDQGLMFGYATDETEECMPLTVXLAHKLN 515
+++ +VGAGDQG+MFGYATDETEE MPLT+ L+HKLN
Sbjct: 61 DKDIADVGAGDQGIMFGYATDETEEAMPLTLLLSHKLN 98
>U41009-5|AAO44915.1| 173|Caenorhabditis elegans Hypothetical
protein C06E7.1d protein.
Length = 173
Score = 146 bits (353), Expect = 1e-35
Identities = 66/81 (81%), Positives = 72/81 (88%)
Frame = +3
Query: 84 FLFTSESVGEGHPXKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 263
FLFTSESV EGHP KMCDQISDA+LDAHL QDP AKVACET+TKTGM++LCGEITSKA V
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVV 65
Query: 264 DYQKVVRETVKHIGYDDSSKG 326
DYQ +VR +K IGYDDSSKG
Sbjct: 66 DYQVLVRNVIKKIGYDDSSKG 86
Score = 30.3 bits (65), Expect = 0.85
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Frame = +1
Query: 262 WIIKKLCAKRSNILVMMIRPKAL----ITRHAV*CSH*TNNHQTLLLGCMRTEMTRKLGQ 429
W+I LC + S+ L ++I+ ITRHA+ H NNH LL T +
Sbjct: 97 WLIT-LC-QESHFLGLLIKYSIQFQDSITRHAMFLLHSNNNHLKSLLESTWTRIVTMSEP 154
Query: 430 ETRA*CSVMQQMRQKNAC 483
E + C M M+ K C
Sbjct: 155 EIKELCLDMLLMKPKKRC 172
>AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical
protein Y105C5B.12a protein.
Length = 345
Score = 116 bits (279), Expect = 1e-26
Identities = 50/71 (70%), Positives = 62/71 (87%)
Frame = +3
Query: 303 GYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGLMFGYATDETEECM 482
GY D GFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGDQG+MFGYATDETEE M
Sbjct: 20 GYFDYRNGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGIMFGYATDETEEAM 79
Query: 483 PLTVXLAHKLN 515
PLT+ L+HKLN
Sbjct: 80 PLTLLLSHKLN 90
>AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical
protein Y105C5B.12b protein.
Length = 363
Score = 112 bits (270), Expect = 1e-25
Identities = 50/76 (65%), Positives = 64/76 (84%), Gaps = 3/76 (3%)
Frame = +3
Query: 297 HIGYDDSSK---GFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGLMFGYATDE 467
H+ D +K GFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGDQG+MFGYATDE
Sbjct: 33 HLAQDPHAKVACGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGIMFGYATDE 92
Query: 468 TEECMPLTVXLAHKLN 515
TEE MPLT+ L+HKLN
Sbjct: 93 TEEAMPLTLLLSHKLN 108
Score = 80.2 bits (189), Expect = 8e-16
Identities = 46/86 (53%), Positives = 52/86 (60%)
Frame = +3
Query: 84 FLFTSESVGEGHPXKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 263
FLFTSESV EGHP KMCDQISDA+LDAHL QDP AKVAC KT VL+ E S
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACGFDYKTCNVLVALEQQSPEIA 65
Query: 264 DYQKVVRETVKHIGYDDSSKGFDYKT 341
V +++ +G D F Y T
Sbjct: 66 AGVHVDKDS-DDVGAGDQGIMFGYAT 90
>U41009-7|AAN84884.1| 51|Caenorhabditis elegans Hypothetical
protein C06E7.1c protein.
Length = 51
Score = 77.0 bits (181), Expect = 8e-15
Identities = 34/39 (87%), Positives = 35/39 (89%)
Frame = +3
Query: 84 FLFTSESVGEGHPXKMCDQISDAILDAHLNQDPDAKVAC 200
FLFTSESV EGHP KMCDQISDA+LDAHL QDP AKVAC
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVAC 44
>U41009-6|AAK68167.2| 84|Caenorhabditis elegans Hypothetical
protein C06E7.1b protein.
Length = 84
Score = 41.5 bits (93), Expect = 3e-04
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +3
Query: 84 FLFTSESVGEGHPXKMCDQ 140
FLFTSESV EGHP KMCDQ
Sbjct: 6 FLFTSESVSEGHPDKMCDQ 24
>Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 32.3 bits (70), Expect = 0.21
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 150 AILDAHLNQDPDAKVACETITKTGM-VLLCGEITSKANVDYQKVVRET 290
A +D ++ Q P+ +C + G VL+ E +KAN+DY ++ +ET
Sbjct: 290 ACIDENMEQPPEGDWSCPHCEEHGPDVLIVEEEPAKANMDYCRICKET 337
>Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 32.3 bits (70), Expect = 0.21
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 150 AILDAHLNQDPDAKVACETITKTGM-VLLCGEITSKANVDYQKVVRET 290
A +D ++ Q P+ +C + G VL+ E +KAN+DY ++ +ET
Sbjct: 290 ACIDENMEQPPEGDWSCPHCEEHGPDVLIVEEEPAKANMDYCRICKET 337
>AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.
Length = 1787
Score = 32.3 bits (70), Expect = 0.21
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 150 AILDAHLNQDPDAKVACETITKTGM-VLLCGEITSKANVDYQKVVRET 290
A +D ++ Q P+ +C + G VL+ E +KAN+DY ++ +ET
Sbjct: 290 ACIDENMEQPPEGDWSCPHCEEHGPDVLIVEEEPAKANMDYCRICKET 337
>U49956-1|AAO38615.1| 669|Caenorhabditis elegans Hypothetical
protein M03A1.3 protein.
Length = 669
Score = 28.3 bits (60), Expect = 3.4
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +3
Query: 204 TITKTGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNI 383
T+T+TG L + + ++++ K + D ++K D KTC L +DQ N+
Sbjct: 37 TLTRTGDSLNLRIYDENSAIRKVHILQKEGKDVLVDCTNKKEDGKTCEAQLTVDQFEKNL 96
Query: 384 AAGV 395
+
Sbjct: 97 PISI 100
>AL132898-18|CAC14411.2| 417|Caenorhabditis elegans Hypothetical
protein Y59A8B.13 protein.
Length = 417
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Frame = +1
Query: 250 PKLTWIIKKLCAKRSNIL---VMMIRPKALITRH 342
PK+ W ++K+C K+ +I + I P+ L+T H
Sbjct: 253 PKIVWHLEKMCNKKEDISRGNPVSIPPQRLLTHH 286
>U28991-14|AAA68388.1| 352|Caenorhabditis elegans Hypothetical
protein F08F8.1 protein.
Length = 352
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -3
Query: 323 FGRIIITNMFDRFAHNFLIIHVSFGCDFATQKHHTGFSYGF 201
FGR D NF H FG HH GF +GF
Sbjct: 149 FGRPFGRRGMDHHGFNFHRHHHPFGAFHGFGGHHHGFGHGF 189
>U28991-13|AAA68387.1| 281|Caenorhabditis elegans Hypothetical
protein F08F8.5 protein.
Length = 281
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -3
Query: 323 FGRIIITNMFDRFAHNFLIIHVSFGCDFATQKHHTGFSYGF 201
FGR D NF H FG HH GF +GF
Sbjct: 223 FGRPFGRRGMDHHGFNFHRHHHPFGAFHGFGGHHHGFGHGF 263
>AF016681-20|AAB66167.1| 370|Caenorhabditis elegans Hypothetical
protein F22E5.1 protein.
Length = 370
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +1
Query: 214 KPVWCFCVAKSHPKLTWIIKKLCAKRSNILVMMIRPKALITR 339
KP+ + K HP + W+ L K+ N++ +M++ A T+
Sbjct: 197 KPLLLAELLKEHPNIWWMDAHLSVKKPNMVELMMKEVAEKTK 238
>AF000198-4|AAB53058.2| 175|Caenorhabditis elegans Hypothetical
protein T28F2.2 protein.
Length = 175
Score = 27.5 bits (58), Expect = 6.0
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = +1
Query: 259 TWIIKKLCAKRSNILVMMIRPKALITRHAV*CSH 360
+W+++++C SN+ V+ + H V C H
Sbjct: 5 SWLLEEICTNFSNLTVLKFKELCNRASHLVLCGH 38
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,123,551
Number of Sequences: 27780
Number of extensions: 281486
Number of successful extensions: 777
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 777
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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