Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_E20
         (517 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    22   3.3  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    22   3.3  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    22   4.3  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    22   4.3  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   7.5  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    21   7.5  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    21   7.5  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   7.5  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          21   7.5  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    21   10.0 

>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -3

Query: 122 WMTLANRFRCEQKY*SSFHXITVSVGLRV 36
           W +LAN++  ++KY   F      +G+ V
Sbjct: 102 WDSLANKYDPDKKYRVKFEEEAKKLGINV 130


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -3

Query: 122 WMTLANRFRCEQKY*SSFHXITVSVGLRV 36
           W +LAN++  ++KY   F      +G+ V
Sbjct: 102 WDSLANKYDPDKKYRVKFEEEAKKLGINV 130


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -1

Query: 451 PNIKPWSPAPTSSSFLFSCTPAAMFGDCWSSASITLH 341
           PN++P S    +++      P  M  D W+S  + LH
Sbjct: 57  PNVRPISSHQIANNVTMQLLPKLMEFDDWTSV-MELH 92


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +2

Query: 71  SWISIFVHIGICWRGSSXQNVRPNKRR 151
           +W+ + V +GI  +G +   VR N  R
Sbjct: 3   TWLLLVVCLGIACQGITSVTVRENSPR 29


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/24 (29%), Positives = 12/24 (50%)
 Frame = -3

Query: 332 IKAFGRIIITNMFDRFAHNFLIIH 261
           +K   RI +   +D F H   ++H
Sbjct: 510 VKGMVRIFLGPKYDEFGHEVDLVH 533


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 445 CSVMQQMRQKNACR 486
           C +  Q R+KN CR
Sbjct: 389 CELHMQPRKKNCCR 402


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 445 CSVMQQMRQKNACR 486
           C +  Q R+KN CR
Sbjct: 389 CELHMQPRKKNCCR 402


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/24 (29%), Positives = 12/24 (50%)
 Frame = -3

Query: 332 IKAFGRIIITNMFDRFAHNFLIIH 261
           +K   RI +   +D F H   ++H
Sbjct: 510 VKGMVRIFLGPKYDEFGHEVDLVH 533


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/24 (29%), Positives = 12/24 (50%)
 Frame = -3

Query: 332 IKAFGRIIITNMFDRFAHNFLIIH 261
           +K   RI +   +D F H   ++H
Sbjct: 136 VKGMVRIFLGPKYDEFGHEVDLVH 159


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +1

Query: 220 VWCFCVAKS 246
           +W FC AKS
Sbjct: 70  IWIFCAAKS 78


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,597
Number of Sequences: 438
Number of extensions: 3023
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)