Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_E20
(517 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g17390.1 68416.m02222 S-adenosylmethionine synthetase, putati... 196 1e-50
At1g02500.2 68414.m00201 S-adenosylmethionine synthetase 1 (SAM1... 192 2e-49
At1g02500.1 68414.m00200 S-adenosylmethionine synthetase 1 (SAM1... 192 2e-49
At4g01850.1 68417.m00242 S-adenosylmethionine synthetase 2 (SAM2... 191 3e-49
At2g36880.1 68415.m04521 S-adenosylmethionine synthetase, putati... 190 4e-49
At2g03270.1 68415.m00280 DNA-binding protein, putative similar t... 29 2.5
At3g43300.1 68416.m04570 guanine nucleotide exchange family prot... 28 4.3
At1g54960.1 68414.m06277 NPK1-related protein kinase, putative (... 28 4.3
At5g50100.1 68418.m06204 expressed protein contains Pfam domain ... 27 7.5
At5g24370.1 68418.m02873 invertase/pectin methylesterase inhibit... 27 9.9
At4g09840.1 68417.m01613 expressed protein 27 9.9
At2g37780.1 68415.m04639 DC1 domain-containing protein contains ... 27 9.9
>At3g17390.1 68416.m02222 S-adenosylmethionine synthetase, putative
similar to S-adenosylmethionine synthetase 2 (Methionine
adenosyltransferase 2, AdoMet synthetase 2)
[Catharanthus roseus] SWISS-PROT:Q96552
Length = 393
Score = 196 bits (477), Expect = 1e-50
Identities = 94/145 (64%), Positives = 114/145 (78%), Gaps = 2/145 (1%)
Frame = +3
Query: 84 FLFTSESVGEGHPXKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 263
FLFTSESV EGHP K+CDQISDAILDA L QDP++KVACET TKT MV++ GEIT+KANV
Sbjct: 4 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKANV 63
Query: 264 DYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHEN--RNDEEVGAGDQ 437
DY+++VR+T + IG+ + G D C V++ ++QQSP+IA GVH + + EEVGAGDQ
Sbjct: 64 DYEQIVRKTCREIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEVGAGDQ 123
Query: 438 GLMFGYATDETEECMPLTVXLAHKL 512
G MFGYATDET E MPLT LA KL
Sbjct: 124 GHMFGYATDETPELMPLTHVLATKL 148
>At1g02500.2 68414.m00201 S-adenosylmethionine synthetase 1 (SAM1)
identical to S-adenosylmethionine synthetase 1
(Methionine adenosyltransferase 1, AdoMet synthetase 1)
[Arabidopsis thaliana] SWISS-PROT:P23686
Length = 393
Score = 192 bits (467), Expect = 2e-49
Identities = 92/145 (63%), Positives = 112/145 (77%), Gaps = 2/145 (1%)
Frame = +3
Query: 84 FLFTSESVGEGHPXKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 263
FLFTSESV EGHP K+CDQISDA+LDA L QDPD+KVACET TKT MV++ GEIT+KA V
Sbjct: 4 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKATV 63
Query: 264 DYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHEN--RNDEEVGAGDQ 437
DY+K+VR+T + IG+ G D C V++ ++QQSP+IA GVH + + EE+GAGDQ
Sbjct: 64 DYEKIVRDTCRAIGFVSDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKCPEEIGAGDQ 123
Query: 438 GLMFGYATDETEECMPLTVXLAHKL 512
G MFGYATDET E MPL+ LA KL
Sbjct: 124 GHMFGYATDETPELMPLSHVLATKL 148
>At1g02500.1 68414.m00200 S-adenosylmethionine synthetase 1 (SAM1)
identical to S-adenosylmethionine synthetase 1
(Methionine adenosyltransferase 1, AdoMet synthetase 1)
[Arabidopsis thaliana] SWISS-PROT:P23686
Length = 393
Score = 192 bits (467), Expect = 2e-49
Identities = 92/145 (63%), Positives = 112/145 (77%), Gaps = 2/145 (1%)
Frame = +3
Query: 84 FLFTSESVGEGHPXKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 263
FLFTSESV EGHP K+CDQISDA+LDA L QDPD+KVACET TKT MV++ GEIT+KA V
Sbjct: 4 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKATV 63
Query: 264 DYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHEN--RNDEEVGAGDQ 437
DY+K+VR+T + IG+ G D C V++ ++QQSP+IA GVH + + EE+GAGDQ
Sbjct: 64 DYEKIVRDTCRAIGFVSDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKCPEEIGAGDQ 123
Query: 438 GLMFGYATDETEECMPLTVXLAHKL 512
G MFGYATDET E MPL+ LA KL
Sbjct: 124 GHMFGYATDETPELMPLSHVLATKL 148
>At4g01850.1 68417.m00242 S-adenosylmethionine synthetase 2 (SAM2)
identical to S-adenosylmethionine synthetase 2
(Methionine adenosyltransferase 2, AdoMet synthetase 2)
[Arabidopsis thaliana] SWISS-PROT:P17562
Length = 393
Score = 191 bits (465), Expect = 3e-49
Identities = 89/145 (61%), Positives = 112/145 (77%), Gaps = 2/145 (1%)
Frame = +3
Query: 84 FLFTSESVGEGHPXKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 263
FLFTSESV EGHP K+CDQISDA+LDA L QDPD+KVACET TKT MV++ GEIT+KA +
Sbjct: 4 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKATI 63
Query: 264 DYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHEN--RNDEEVGAGDQ 437
DY+K+VR+T + IG+ G D C V++ ++QQSP+IA GVH + + E++GAGDQ
Sbjct: 64 DYEKIVRDTCRSIGFISDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQ 123
Query: 438 GLMFGYATDETEECMPLTVXLAHKL 512
G MFGYATDET E MPL+ LA K+
Sbjct: 124 GHMFGYATDETPELMPLSHVLATKI 148
>At2g36880.1 68415.m04521 S-adenosylmethionine synthetase, putative
similar to S-adenosylmethionine synthetase 3 (Methionine
adenosyltransferase 3, AdoMet synthetase 3)
[Lycopersicon esculentum] SWISS-PROT:P43282
Length = 390
Score = 190 bits (464), Expect = 4e-49
Identities = 91/145 (62%), Positives = 112/145 (77%), Gaps = 2/145 (1%)
Frame = +3
Query: 84 FLFTSESVGEGHPXKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 263
FLFTSESV EGHP K+CDQISDAILDA L QDP++KVACET TKT MV++ GEIT+ A V
Sbjct: 4 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPESKVACETCTKTNMVMVFGEITTAAKV 63
Query: 264 DYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHEN--RNDEEVGAGDQ 437
DY+K+VR T + IG+ + G D C+V++ ++QQSP+IA GVH + + E++GAGDQ
Sbjct: 64 DYEKIVRSTCREIGFISADVGLDADKCNVLVNIEQQSPDIAQGVHGHLTKKPEDIGAGDQ 123
Query: 438 GLMFGYATDETEECMPLTVXLAHKL 512
G MFGYATDET E MPLT LA KL
Sbjct: 124 GHMFGYATDETPELMPLTHVLATKL 148
>At2g03270.1 68415.m00280 DNA-binding protein, putative similar to
Swiss-Prot:Q60560 DNA-binding protein SMUBP-2
(Immunoglobulin MU binding protein 2) (SMUBP-2) (Insulin
II gene enhancer-binding protein)(RIPE3B-binding complex
3B2 P110 subunit) (RIP-1)[Mesocricetus auratus];
identical to putative helicase (atpc-2 gene) cDNA
NCBI_gi:11191230
Length = 639
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/70 (18%), Positives = 40/70 (57%)
Frame = +3
Query: 114 GHPXKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANVDYQKVVRETV 293
GHP ++ Q+ D+ LDA + + ++ +A + + M L G++ + + ++++++ +
Sbjct: 264 GHPARLLPQVLDSALDAQVLKGDNSGLAND--IRKEMKALNGKLLKAKDKNTRRLIQKEL 321
Query: 294 KHIGYDDSSK 323
+ +G ++ +
Sbjct: 322 RTLGKEERKR 331
>At3g43300.1 68416.m04570 guanine nucleotide exchange family protein
similar to SP|Q9Y6D5 Brefeldin A-inhibited guanine
nucleotide-exchange protein 2 {Homo sapiens}; contains
Pfam profile PF01369: Sec7 domain
Length = 1756
Score = 27.9 bits (59), Expect = 4.3
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +3
Query: 177 DPDAKVACETITKTGMVLLCGEITSKANVDYQKVVRE---TVKHIGYDDSSKGFDYKTCS 347
DP+ +A +T + G L C K+ VD++K+ RE + ++ D +S G +T S
Sbjct: 523 DPNPAMASQTASVKGSSLQCLVNVLKSLVDWEKIRREAENSTRNANEDSASTGEPIETKS 582
>At1g54960.1 68414.m06277 NPK1-related protein kinase, putative
(ANP2) similar to protein kinase [Nicotiana tabacum]
gi|456309|dbj|BAA05648; identical to cDNA NPK1-related
protein kinase 2, partial cds GI:2342424
Length = 596
Score = 27.9 bits (59), Expect = 4.3
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +3
Query: 168 LNQDPDAKVACETITKTGMVLLCGEITSKANVDYQKVVRETVKHIGYDD 314
L+ + DAK +C+T+++ +L C + N + + V V H Y +
Sbjct: 431 LDNNTDAKKSCDTMSEISDILKCKFDENSGNGETETKVSMEVDHPSYSE 479
>At5g50100.1 68418.m06204 expressed protein contains Pfam domain
PF04134: Protein of unknown function, DUF393
Length = 214
Score = 27.1 bits (57), Expect = 7.5
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +3
Query: 312 DSSKGFDYKTCSVMLALDQQSPNIAAGVHE-NRNDEEVGAG 431
+ ++G DYKT + Q N+ GV R EEVG G
Sbjct: 116 EDNQGLDYKTVMGQIHAIQSDGNVVKGVEAFRRLYEEVGLG 156
>At5g24370.1 68418.m02873 invertase/pectin methylesterase inhibitor
family protein contains Pfam profile PF04043: Plant
invertase/pectin methylesterase inhibitor
Length = 191
Score = 26.6 bits (56), Expect = 9.9
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +3
Query: 138 QISDAIL-DAHLNQDPDAKVACETITKTGMVLLCGEITSKANVDYQKVVRETVKHIGYDD 314
QI D +L +A QD ACE K + L TS N DY + + + +GY D
Sbjct: 87 QIQDYLLPNATDTQDKAVFSACEIAYKAVVSRLQSAYTSMKNSDYVAMKAQQNQALGYID 146
>At4g09840.1 68417.m01613 expressed protein
Length = 106
Score = 26.6 bits (56), Expect = 9.9
Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = +3
Query: 363 DQQS-PNIAAGVHENRNDEEVGAGD 434
DQQ+ P+ AGV ++ DEE AGD
Sbjct: 51 DQQAVPSAVAGVSDSEEDEEHEAGD 75
>At2g37780.1 68415.m04639 DC1 domain-containing protein contains
Pfam PF03107: DC1 domain
Length = 286
Score = 26.6 bits (56), Expect = 9.9
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = -3
Query: 503 CKXYSQRHAFFCLICCITEHQALVSCPNFLVIS 405
CK Y + + C C H+ +CP+ L+ S
Sbjct: 30 CKLYGEGRTYRCSDCDYDLHEYCATCPSILLNS 62
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,268,866
Number of Sequences: 28952
Number of extensions: 258741
Number of successful extensions: 713
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 708
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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