Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_E18
(672 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g11630.1 68416.m01425 2-cys peroxiredoxin, chloroplast (BAS1)... 226 9e-60
At5g06290.1 68418.m00705 2-cys peroxiredoxin, chloroplast, putat... 225 3e-59
At1g48130.1 68414.m05371 peroxiredoxin (PER1) / rehydrin, putati... 82 4e-16
At3g26060.1 68416.m03245 peroxiredoxin Q, putative similar to pe... 79 3e-15
At3g06050.1 68416.m00692 alkyl hydroperoxide reductase/thiol spe... 34 0.075
At1g80910.1 68414.m09493 expressed protein 34 0.099
At3g55120.1 68416.m06121 chalcone-flavanone isomerase / chalcone... 32 0.30
At1g16020.2 68414.m01922 expressed protein 32 0.40
At1g16020.1 68414.m01921 expressed protein 32 0.40
At3g57570.1 68416.m06410 expressed protein 30 1.6
At4g16146.1 68417.m02449 expressed protein 28 6.5
At4g28395.1 68417.m04064 lipid transfer protein, putative identi... 27 8.6
>At3g11630.1 68416.m01425 2-cys peroxiredoxin, chloroplast (BAS1)
identical to SP|Q96291 2-cys peroxiredoxin BAS1,
chloroplast precursor {Arabidopsis thaliana}; contains
Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide
reductase and thiol-specific antioxidant) family
Length = 266
Score = 226 bits (553), Expect = 9e-60
Identities = 107/185 (57%), Positives = 136/185 (73%), Gaps = 2/185 (1%)
Frame = +2
Query: 110 APQFKATAVVNGEFKDISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGC 286
AP F+A AV + EF + LSDY GK YV+LFFYPLDFTFVCPTEI AFS++ EF K+
Sbjct: 79 APDFEAEAVFDQEFIKVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRHSEFEKLNT 138
Query: 287 EVLGASTDSHFTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLF 466
EVLG S DS F+HLAW+ T RK GGLG +N PLISD + IS+ +GVL + GI RGLF
Sbjct: 139 EVLGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLISDVTKSISKSFGVLIHDQGIALRGLF 198
Query: 467 IIDDKQNLRQITINDLPVGRSVEETLRLVQAFQFTDKH-GEVCPANWRPGAKTIKPDTKA 643
IID + ++ TIN+L +GRSV+ET+R +QA Q+ ++ EVCPA W+PG K++KPD K
Sbjct: 199 IIDKEGVIQHSTINNLGIGRSVDETMRTLQALQYIQENPDEVCPAGWKPGEKSMKPDPKL 258
Query: 644 AXEYF 658
+ EYF
Sbjct: 259 SKEYF 263
>At5g06290.1 68418.m00705 2-cys peroxiredoxin, chloroplast, putative
very strong similarity to SP|Q96291 2-cys peroxiredoxin
BAS1, chloroplast precursor {Arabidopsis thaliana};
contains Pfam profile: PF00578 AhpC/TSA (alkyl
hydroperoxide reductase and thiol-specific antioxidant)
family
Length = 273
Score = 225 bits (549), Expect = 3e-59
Identities = 105/185 (56%), Positives = 137/185 (74%), Gaps = 2/185 (1%)
Frame = +2
Query: 110 APQFKATAVVNGEFKDISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGC 286
AP F+A AV + EF + LS+Y GK YV+LFFYPLDFTFVCPTEI AFS++ +EF K+
Sbjct: 86 APDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITAFSDRYEEFEKLNT 145
Query: 287 EVLGASTDSHFTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLF 466
EVLG S DS F+HLAW+ T RK GGLG +N PL+SD + IS+ +GVL + GI RGLF
Sbjct: 146 EVLGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLVSDITKSISKSFGVLIPDQGIALRGLF 205
Query: 467 IIDDKQNLRQITINDLPVGRSVEETLRLVQAFQFTDKH-GEVCPANWRPGAKTIKPDTKA 643
IID + ++ TIN+L +GRSV+ET+R +QA Q+ ++ EVCPA W+PG K++KPD K
Sbjct: 206 IIDKEGVIQHSTINNLGIGRSVDETMRTLQALQYVQENPDEVCPAGWKPGEKSMKPDPKL 265
Query: 644 AXEYF 658
+ EYF
Sbjct: 266 SKEYF 270
>At1g48130.1 68414.m05371 peroxiredoxin (PER1) / rehydrin, putative
identical to peroxiredoxin (Rehydrin homolog)
[Arabidopsis thaliana] SWISS-PROT:O04005; contains Pfam
profile: PF00578 AhpC/TSA (alkyl hydroperoxide reductase
and thiol-specific antioxidant) family
Length = 216
Score = 81.8 bits (193), Expect = 4e-16
Identities = 48/152 (31%), Positives = 72/152 (47%), Gaps = 3/152 (1%)
Frame = +2
Query: 164 LSDY-KGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDSHFTHLAWIN 340
L DY + VLF +P DFT VC TE+ A ++ A EF K G ++LG S D +H WI
Sbjct: 24 LHDYFANSWTVLFSHPGDFTPVCTTELGAMAKYAHEFDKRGVKLLGLSCDDVQSHKDWIK 83
Query: 341 TPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLFIIDDKQNLRQITINDLPV 520
+N P+I+D + I ++D P R L I+ ++ +
Sbjct: 84 DIEAFNHGSKVNYPIIADPNKEIIPQLNMIDPIENGPSRALHIVGPDSKIKLSFLYPSTT 143
Query: 521 GRSVEETLRLVQAFQFTDKHGE--VCPANWRP 610
GR+++E LR + + KH P NW+P
Sbjct: 144 GRNMDEVLRALDSLLMASKHNNKIATPVNWKP 175
>At3g26060.1 68416.m03245 peroxiredoxin Q, putative similar to
peroxiredoxin Q [Sedum lineare] GI:6899842; contains
Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide
reductase and thiol-specific antioxidant) family
Length = 216
Score = 79.0 bits (186), Expect = 3e-15
Identities = 44/137 (32%), Positives = 77/137 (56%), Gaps = 1/137 (0%)
Frame = +2
Query: 152 KDISLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDSHFTHLA 331
K +SL YKGK VVL+FYP D T C + AF + ++F+K G EV+G S D +H A
Sbjct: 86 KPVSLKKYKGKPVVLYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSASHKA 145
Query: 332 WINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETG-IPFRGLFIIDDKQNLRQITIN 508
+ + + + L+SD+ +++ +D+GV + G +P R +++D ++ I N
Sbjct: 146 FASKYK-------LPYTLLSDEGNKVRKDWGVPGDLFGALPGRQTYVLDKNGVVQLIYNN 198
Query: 509 DLPVGRSVEETLRLVQA 559
+ ++ETL+ ++A
Sbjct: 199 QFQPEKHIDETLKFLKA 215
>At3g06050.1 68416.m00692 alkyl hydroperoxide reductase/thiol
specific antioxidant (AhpC/TSA)/mal allergen family
protein identical to SP|Q9M7T0 Putative peroxiredoxin,
mitochondrial precursor {Arabidopsis thaliana}; similar
to thioredoxin peroxidase [Capsicum annuum] GI:18654477;
contains Pfam profile: PF00578 AhpC/TSA (alkyl
hydroperoxide reductase and thiol-specific antioxidant)
family
Length = 201
Score = 34.3 bits (75), Expect = 0.075
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +2
Query: 137 VNGEFKDISLSD-YKGKYVVLFFYPLDFTFVCPTE-IIAFSEKADEFRKIGCE-VLGAST 307
V+ +F LSD +KGK VV+F P +T VC + + ++ D+F+ G + V+ S
Sbjct: 58 VSSKFSTTPLSDIFKGKKVVIFGLPGAYTGVCSQQHVPSYKSHIDKFKAKGIDSVICVSV 117
Query: 308 DSHFTHLAW 334
+ F W
Sbjct: 118 NDPFAINGW 126
>At1g80910.1 68414.m09493 expressed protein
Length = 497
Score = 33.9 bits (74), Expect = 0.099
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 7/61 (11%)
Frame = +2
Query: 155 DISLSDYKGKYV--VLFFYPLDFTFVCPTEIIAFSEKADEFRKI-----GCEVLGASTDS 313
D+ ++G+ + +LFFYP D TF +I SE F ++ CEV+ A S
Sbjct: 19 DLRRGQHEGQELDKILFFYPPDLTFSTQLSVIGLSEGLITFTRLFSPEAACEVIEAERHS 78
Query: 314 H 316
H
Sbjct: 79 H 79
>At3g55120.1 68416.m06121 chalcone-flavanone isomerase / chalcone
isomerase (CHI) identical to SP|P41088
Length = 246
Score = 32.3 bits (70), Expect = 0.30
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = -1
Query: 609 GLQLAGHTSPCLSVNWKACTSRRVSSTDLPTGRSLIVICLRFCLSSMMKSPRKGMPVSSS 430
G+ L G+ P LSV WK T+ ++ + +P R ++ + MK P G S
Sbjct: 62 GVYLEGNAVPSLSVKWKGKTTEELTES-IPFFREIVTGAFEKFIKVTMKLPLTGQQYSEK 120
Query: 429 ST 424
T
Sbjct: 121 VT 122
>At1g16020.2 68414.m01922 expressed protein
Length = 502
Score = 31.9 bits (69), Expect = 0.40
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
Frame = +2
Query: 191 VLFFYPLDFTFVCPTEIIAFSEKADEFRKI-----GCEVLGASTDSH 316
+LFFYP D F +I SE F ++ CEV+ A SH
Sbjct: 31 ILFFYPADLDFSTQLSVIGLSEGLITFTRLFSPEAACEVIEAERHSH 77
>At1g16020.1 68414.m01921 expressed protein
Length = 515
Score = 31.9 bits (69), Expect = 0.40
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
Frame = +2
Query: 191 VLFFYPLDFTFVCPTEIIAFSEKADEFRKI-----GCEVLGASTDSH 316
+LFFYP D F +I SE F ++ CEV+ A SH
Sbjct: 31 ILFFYPADLDFSTQLSVIGLSEGLITFTRLFSPEAACEVIEAERHSH 77
>At3g57570.1 68416.m06410 expressed protein
Length = 1057
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = -1
Query: 609 GLQLAGHTSPCLSVNWKACTSRRVSSTDLPTGRSLIVICLRFCLSSMMKSPRKGMPVSSS 430
G + +T CL + C+S STD+ T + + I R C+++++ S + P SS
Sbjct: 875 GYSVLDYTIHCLIEDRSNCSSIPKLSTDILTCENPLPIPFRLCMANVIISACQKNPESSK 934
Query: 429 ST 424
T
Sbjct: 935 KT 936
>At4g16146.1 68417.m02449 expressed protein
Length = 102
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +2
Query: 350 KQGGLGPMNIPLISDKSHRI---SRDYGVLDEETGIPFRGLFIID 475
K GGL P PLIS S R S D+ +L +E I R + I+
Sbjct: 25 KYGGLVPKKKPLISKDSKRAFFDSADWALLKQEASIDQRTIAAIE 69
>At4g28395.1 68417.m04064 lipid transfer protein, putative identical
to anther-specific gene ATA7 [gi:2746339]; contains Pfam
protease inhibitor/seed storage/LTP family domain
Length = 180
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -1
Query: 408 MRCDLSLIRGMFMGPSPPCLRGVLIQARCVKCES 307
M C + + G+F PSP C RGV VK S
Sbjct: 77 MPC-MGFVEGIFQQPSPDCCRGVTHLNNVVKFTS 109
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,902,423
Number of Sequences: 28952
Number of extensions: 230951
Number of successful extensions: 902
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 897
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1422784080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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