Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_E15
         (624 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D55426 Cluster: PREDICTED: similar to CG14482-PA...    45   0.002
UniRef50_UPI00005184F7 Cluster: PREDICTED: similar to CG14482-PA...    39   0.11 
UniRef50_Q500Y7 Cluster: RH56961p; n=3; Sophophora|Rep: RH56961p...    35   1.4  
UniRef50_Q17N95 Cluster: Ubiquinol cytochrome C oxidoreductase-s...    34   2.4  
UniRef50_Q5CRR2 Cluster: Putative uncharacterized protein; n=2; ...    33   4.2  

>UniRef50_UPI0000D55426 Cluster: PREDICTED: similar to CG14482-PA;
           n=2; Endopterygota|Rep: PREDICTED: similar to CG14482-PA
           - Tribolium castaneum
          Length = 63

 Score = 44.8 bits (101), Expect = 0.002
 Identities = 18/48 (37%), Positives = 23/48 (47%)
 Frame = +2

Query: 104 VGKXHLEIXXXXXXXXXXXXXXXXXXXXYFTDWKVFVANIPYYNGKFK 247
           +GK H+EI                    Y TDWK+ +  +PYYNGKFK
Sbjct: 14  IGKKHIEIASQWIGSAVAFGATAGVGITYATDWKLILQYMPYYNGKFK 61


>UniRef50_UPI00005184F7 Cluster: PREDICTED: similar to CG14482-PA;
           n=1; Apis mellifera|Rep: PREDICTED: similar to
           CG14482-PA - Apis mellifera
          Length = 51

 Score = 38.7 bits (86), Expect = 0.11
 Identities = 16/50 (32%), Positives = 21/50 (42%)
 Frame = +2

Query: 98  VRVGKXHLEIXXXXXXXXXXXXXXXXXXXXYFTDWKVFVANIPYYNGKFK 247
           +++GK H EI                    + TDWKV    IP+Y  KFK
Sbjct: 1   MKIGKRHFEIATKWIPSLMVYTGAAGLAMVFVTDWKVIAGYIPFYGNKFK 50


>UniRef50_Q500Y7 Cluster: RH56961p; n=3; Sophophora|Rep: RH56961p -
           Drosophila melanogaster (Fruit fly)
          Length = 57

 Score = 35.1 bits (77), Expect = 1.4
 Identities = 14/47 (29%), Positives = 19/47 (40%)
 Frame = +2

Query: 107 GKXHLEIXXXXXXXXXXXXXXXXXXXXYFTDWKVFVANIPYYNGKFK 247
           GK H EI                    Y+TDWK+ +  +P Y  KF+
Sbjct: 8   GKKHAEIASSFIRSGAGFGGAAGLAVLYYTDWKLVLQYVPIYGSKFE 54


>UniRef50_Q17N95 Cluster: Ubiquinol cytochrome C
           oxidoreductase-subunit 6.4kD-subunit, putative; n=1;
           Aedes aegypti|Rep: Ubiquinol cytochrome C
           oxidoreductase-subunit 6.4kD-subunit, putative - Aedes
           aegypti (Yellowfever mosquito)
          Length = 54

 Score = 34.3 bits (75), Expect = 2.4
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = +2

Query: 188 YFTDWKVFVANIPYYNGKF 244
           Y TDW+V V  IP+Y GKF
Sbjct: 33  YLTDWRVIVTYIPFYGGKF 51


>UniRef50_Q5CRR2 Cluster: Putative uncharacterized protein; n=2;
           Cryptosporidium|Rep: Putative uncharacterized protein -
           Cryptosporidium parvum Iowa II
          Length = 710

 Score = 33.5 bits (73), Expect = 4.2
 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = -1

Query: 207 TFQSVKYRSVTKAAPPNPPAEDRNAVA-ISKCXLPTRTIFNSXW 79
           TF + K  S+    P N P  + N V+ IS C L    IFNS W
Sbjct: 392 TFGNNKETSIKTPPPSNFPTNNSNCVSNISTCDLSYNAIFNSNW 435


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 553,847,972
Number of Sequences: 1657284
Number of extensions: 10056911
Number of successful extensions: 18148
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18145
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45636850930
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)