Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_E15
         (624 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   2.7  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   8.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   8.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.4  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   8.4  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 201 QSVKYRSVTKAAPPNPP 151
           +S+ Y S+   APP PP
Sbjct: 719 ESISYLSMENNAPPPPP 735


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +3

Query: 369 VLFYLYPDKPIVKS*ILS*YVYF 437
           ++FY+ PD  +VK  +L+  + F
Sbjct: 184 LIFYILPDLDVVKGAMLTNCICF 206


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +3

Query: 369 VLFYLYPDKPIVKS*ILS*YVYF 437
           ++FY+ PD  +VK  +L+  + F
Sbjct: 184 LIFYILPDLDVVKGAMLTNCICF 206


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +3

Query: 369 VLFYLYPDKPIVKS*ILS*YVYF 437
           ++FY+ PD  +VK  +L+  + F
Sbjct: 184 LIFYILPDLDVVKGAMLTNCICF 206


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +3

Query: 369 VLFYLYPDKPIVKS*ILS*YVYF 437
           ++FY+ PD  +VK  +L+  + F
Sbjct: 184 LIFYILPDLDVVKGAMLTNCICF 206


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -1

Query: 570 MVHLSL*YWCLNFSCN*FLLIL 505
           M HL++ + C + +C  FL++L
Sbjct: 251 MYHLAILWSCTSTNCPRFLIML 272


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,813
Number of Sequences: 336
Number of extensions: 2966
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)