Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_E15
         (624 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D55636-1|BAA21748.1|   56|Homo sapiens smallest subunit of ubiqu...    30   7.6  
BC003594-1|AAH03594.1|   56|Homo sapiens ubiquinol-cytochrome c ...    30   7.6  
BC000462-1|AAH00462.1|   56|Homo sapiens ubiquinol-cytochrome c ...    30   7.6  
AC005943-2|AAC72105.1|   39|Homo sapiens smallest subunit of ubi...    30   7.6  

>D55636-1|BAA21748.1|   56|Homo sapiens smallest subunit of
           ubiquinol-cytochrome c reductase protein.
          Length = 56

 Score = 29.9 bits (64), Expect = 7.6
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +2

Query: 194 TDWKVFVANIPYYNGKFK 247
           TDW++ +  +PY NGKFK
Sbjct: 36  TDWRLILDWVPYINGKFK 53


>BC003594-1|AAH03594.1|   56|Homo sapiens ubiquinol-cytochrome c
           reductase, 6.4kDa subunit protein.
          Length = 56

 Score = 29.9 bits (64), Expect = 7.6
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +2

Query: 194 TDWKVFVANIPYYNGKFK 247
           TDW++ +  +PY NGKFK
Sbjct: 36  TDWRLILDWVPYINGKFK 53


>BC000462-1|AAH00462.1|   56|Homo sapiens ubiquinol-cytochrome c
           reductase, 6.4kDa subunit protein.
          Length = 56

 Score = 29.9 bits (64), Expect = 7.6
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +2

Query: 194 TDWKVFVANIPYYNGKFK 247
           TDW++ +  +PY NGKFK
Sbjct: 36  TDWRLILDWVPYINGKFK 53


>AC005943-2|AAC72105.1|   39|Homo sapiens smallest subunit of
           ubiquinol-cytochrome c reductase protein.
          Length = 39

 Score = 29.9 bits (64), Expect = 7.6
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +2

Query: 194 TDWKVFVANIPYYNGKFK 247
           TDW++ +  +PY NGKFK
Sbjct: 19  TDWRLILDWVPYINGKFK 36


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,010,232
Number of Sequences: 237096
Number of extensions: 1558388
Number of successful extensions: 2230
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2230
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6747805200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)