Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_E14
         (679 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y00843-1|CAA68766.1|  410|Drosophila melanogaster protein ( Dros...    29   5.8  
BT025227-1|ABF17918.1|  418|Drosophila melanogaster FI01011p pro...    29   5.8  
AY119136-1|AAM50996.1|  418|Drosophila melanogaster RE37758p pro...    29   5.8  
AE014134-1019|AAF52323.2|  418|Drosophila melanogaster CG11607-P...    29   5.8  

>Y00843-1|CAA68766.1|  410|Drosophila melanogaster protein (
           Drosophila melanogasterH2.0 homeobox gene. ).
          Length = 410

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 14/26 (53%), Positives = 15/26 (57%)
 Frame = +3

Query: 72  TFTPGWGQGKXSEATDYRNDGCSSED 149
           T TP  G G   EA DY +D CSS D
Sbjct: 369 TSTPS-GDGAPQEALDYSSDSCSSVD 393


>BT025227-1|ABF17918.1|  418|Drosophila melanogaster FI01011p
           protein.
          Length = 418

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 14/26 (53%), Positives = 15/26 (57%)
 Frame = +3

Query: 72  TFTPGWGQGKXSEATDYRNDGCSSED 149
           T TP  G G   EA DY +D CSS D
Sbjct: 377 TSTPS-GDGTPQEALDYSSDSCSSVD 401


>AY119136-1|AAM50996.1|  418|Drosophila melanogaster RE37758p
           protein.
          Length = 418

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 14/26 (53%), Positives = 15/26 (57%)
 Frame = +3

Query: 72  TFTPGWGQGKXSEATDYRNDGCSSED 149
           T TP  G G   EA DY +D CSS D
Sbjct: 377 TSTPS-GDGTPQEALDYSSDSCSSVD 401


>AE014134-1019|AAF52323.2|  418|Drosophila melanogaster CG11607-PA
           protein.
          Length = 418

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 14/26 (53%), Positives = 15/26 (57%)
 Frame = +3

Query: 72  TFTPGWGQGKXSEATDYRNDGCSSED 149
           T TP  G G   EA DY +D CSS D
Sbjct: 377 TSTPS-GDGTPQEALDYSSDSCSSVD 401


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,887,207
Number of Sequences: 53049
Number of extensions: 435193
Number of successful extensions: 699
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 699
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)