Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_E14
         (679 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024696-11|AAK84510.1|  401|Caenorhabditis elegans Hypothetical...    29   4.0  
AC006697-1|AAF60390.2|  278|Caenorhabditis elegans Hypothetical ...    29   4.0  
Z50863-2|CAA90737.1|  351|Caenorhabditis elegans Hypothetical pr...    28   5.3  
Z70270-9|CAI79144.1|  261|Caenorhabditis elegans Hypothetical pr...    27   9.3  
AF040644-4|AAB94968.2|  324|Caenorhabditis elegans Serpentine re...    27   9.3  
AF024498-8|AAF39807.3|  305|Caenorhabditis elegans Serpentine re...    27   9.3  

>AC024696-11|AAK84510.1|  401|Caenorhabditis elegans Hypothetical
           protein F07B7.14 protein.
          Length = 401

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = +2

Query: 455 WNNYCFRELF*KISHYAFS*HLKTVYYSTFIFLCY*YFNQFSFIIL 592
           W +  F +LF  ++   +  H KT+Y   F F C  YF  F  +IL
Sbjct: 133 WQDSVFGQLFPHLNFNPYKSH-KTIY---FTFFCNFYFEMFFLLIL 174


>AC006697-1|AAF60390.2|  278|Caenorhabditis elegans Hypothetical
           protein W09B7.3 protein.
          Length = 278

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = +2

Query: 455 WNNYCFRELF*KISHYAFS*HLKTVYYSTFIFLCY*YFNQFSFIIL 592
           W +  F +LF  ++   +  H KT+Y   F F C  YF  F  +IL
Sbjct: 10  WQDSVFGQLFPHLNFNPYKSH-KTIY---FTFFCNFYFEMFFLLIL 51


>Z50863-2|CAA90737.1|  351|Caenorhabditis elegans Hypothetical
           protein C14H10.4 protein.
          Length = 351

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 11/35 (31%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = +3

Query: 552 FVTNILINFHLLYYTTYYVKT-IQNYRPLLTYYNV 653
           F  + L NF ++Y TT++VK  I  Y+ ++  +++
Sbjct: 15  FCASFLTNFFVIYLTTFFVKNLIGTYKKMILIFSL 49


>Z70270-9|CAI79144.1|  261|Caenorhabditis elegans Hypothetical
           protein C53D6.11 protein.
          Length = 261

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = +3

Query: 555 VTNILINFHLLYYTTYYVKTIQNYRPLLTYYNVDHQIKIIK 677
           +TN L+  H L ++ Y+V   Q+YR  +   N+  + KI+K
Sbjct: 219 ITNWLVCIHSLLHSAYFVYNHQDYREAVR--NLFRKWKIVK 257


>AF040644-4|AAB94968.2|  324|Caenorhabditis elegans Serpentine
           receptor, class d (delta)protein 69 protein.
          Length = 324

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +3

Query: 549 FFVTNILINFHLLYYTTYYVK 611
           F +T+ +IN H+LYY T  +K
Sbjct: 99  FGITSCMINLHMLYYRTMCLK 119


>AF024498-8|AAF39807.3|  305|Caenorhabditis elegans Serpentine
           receptor, class x protein105 protein.
          Length = 305

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 10/38 (26%)
 Frame = +3

Query: 564 ILINFHLLYY------TTYYV----KTIQNYRPLLTYY 647
           ILIN ++LYY      T++Y+    KTI N   LLTY+
Sbjct: 23  ILINLYMLYYFSKLQKTSFYILCASKTISNIFMLLTYF 60


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,222,095
Number of Sequences: 27780
Number of extensions: 245532
Number of successful extensions: 558
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 558
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)