BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fcaL-P01_F_E14 (679 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AC024696-11|AAK84510.1| 401|Caenorhabditis elegans Hypothetical... 29 4.0 AC006697-1|AAF60390.2| 278|Caenorhabditis elegans Hypothetical ... 29 4.0 Z50863-2|CAA90737.1| 351|Caenorhabditis elegans Hypothetical pr... 28 5.3 Z70270-9|CAI79144.1| 261|Caenorhabditis elegans Hypothetical pr... 27 9.3 AF040644-4|AAB94968.2| 324|Caenorhabditis elegans Serpentine re... 27 9.3 AF024498-8|AAF39807.3| 305|Caenorhabditis elegans Serpentine re... 27 9.3 >AC024696-11|AAK84510.1| 401|Caenorhabditis elegans Hypothetical protein F07B7.14 protein. Length = 401 Score = 28.7 bits (61), Expect = 4.0 Identities = 16/46 (34%), Positives = 23/46 (50%) Frame = +2 Query: 455 WNNYCFRELF*KISHYAFS*HLKTVYYSTFIFLCY*YFNQFSFIIL 592 W + F +LF ++ + H KT+Y F F C YF F +IL Sbjct: 133 WQDSVFGQLFPHLNFNPYKSH-KTIY---FTFFCNFYFEMFFLLIL 174 >AC006697-1|AAF60390.2| 278|Caenorhabditis elegans Hypothetical protein W09B7.3 protein. Length = 278 Score = 28.7 bits (61), Expect = 4.0 Identities = 16/46 (34%), Positives = 23/46 (50%) Frame = +2 Query: 455 WNNYCFRELF*KISHYAFS*HLKTVYYSTFIFLCY*YFNQFSFIIL 592 W + F +LF ++ + H KT+Y F F C YF F +IL Sbjct: 10 WQDSVFGQLFPHLNFNPYKSH-KTIY---FTFFCNFYFEMFFLLIL 51 >Z50863-2|CAA90737.1| 351|Caenorhabditis elegans Hypothetical protein C14H10.4 protein. Length = 351 Score = 28.3 bits (60), Expect = 5.3 Identities = 11/35 (31%), Positives = 22/35 (62%), Gaps = 1/35 (2%) Frame = +3 Query: 552 FVTNILINFHLLYYTTYYVKT-IQNYRPLLTYYNV 653 F + L NF ++Y TT++VK I Y+ ++ +++ Sbjct: 15 FCASFLTNFFVIYLTTFFVKNLIGTYKKMILIFSL 49 >Z70270-9|CAI79144.1| 261|Caenorhabditis elegans Hypothetical protein C53D6.11 protein. Length = 261 Score = 27.5 bits (58), Expect = 9.3 Identities = 14/41 (34%), Positives = 24/41 (58%) Frame = +3 Query: 555 VTNILINFHLLYYTTYYVKTIQNYRPLLTYYNVDHQIKIIK 677 +TN L+ H L ++ Y+V Q+YR + N+ + KI+K Sbjct: 219 ITNWLVCIHSLLHSAYFVYNHQDYREAVR--NLFRKWKIVK 257 >AF040644-4|AAB94968.2| 324|Caenorhabditis elegans Serpentine receptor, class d (delta)protein 69 protein. Length = 324 Score = 27.5 bits (58), Expect = 9.3 Identities = 10/21 (47%), Positives = 15/21 (71%) Frame = +3 Query: 549 FFVTNILINFHLLYYTTYYVK 611 F +T+ +IN H+LYY T +K Sbjct: 99 FGITSCMINLHMLYYRTMCLK 119 >AF024498-8|AAF39807.3| 305|Caenorhabditis elegans Serpentine receptor, class x protein105 protein. Length = 305 Score = 27.5 bits (58), Expect = 9.3 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 10/38 (26%) Frame = +3 Query: 564 ILINFHLLYY------TTYYV----KTIQNYRPLLTYY 647 ILIN ++LYY T++Y+ KTI N LLTY+ Sbjct: 23 ILINLYMLYYFSKLQKTSFYILCASKTISNIFMLLTYF 60 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,222,095 Number of Sequences: 27780 Number of extensions: 245532 Number of successful extensions: 558 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 538 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 558 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1539654388 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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