Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_E12
(758 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A5A7A5 Cluster: Farnesyl diphosphate synthase 2; n=1; B... 430 e-119
UniRef50_Q1XAB1 Cluster: Farnesyl diphosphate synthase-like prot... 184 3e-45
UniRef50_A5A7A6 Cluster: Farnesyl diphosphate synthase 3; n=1; B... 172 9e-42
UniRef50_Q09152 Cluster: Farnesyl pyrophosphate synthetase 1, mi... 137 2e-31
UniRef50_P0C565 Cluster: Chrysanthemyl diphosphate synthase, chl... 135 1e-30
UniRef50_Q56CY8 Cluster: Farnesyl diphosphate synthase; n=16; Ne... 130 4e-29
UniRef50_Q7KN61 Cluster: GM06581p; n=6; Endopterygota|Rep: GM065... 128 1e-28
UniRef50_P14324 Cluster: Farnesyl pyrophosphate synthetase (FPP ... 125 1e-27
UniRef50_P08836 Cluster: Farnesyl pyrophosphate synthetase (FPP ... 125 1e-27
UniRef50_Q01KM5 Cluster: OSIGBa0158D24.4 protein; n=4; Oryza sat... 123 6e-27
UniRef50_P08524 Cluster: Farnesyl pyrophosphate synthetase (FPP ... 116 6e-25
UniRef50_A4RUB9 Cluster: Predicted protein; n=2; Ostreococcus|Re... 114 2e-24
UniRef50_A2R6Y8 Cluster: Contig An16c0060, complete genome; n=1;... 114 3e-24
UniRef50_Q54XP0 Cluster: Farnesyl diphosphate synthase; n=3; Dic... 111 1e-23
UniRef50_A5DDW6 Cluster: Putative uncharacterized protein; n=1; ... 111 2e-23
UniRef50_Q58GE8 Cluster: Geranyl diphosphate synthase; n=1; Ips ... 110 4e-23
UniRef50_Q75ND9 Cluster: Farnesyl diphosphate synthase; n=5; Dik... 109 1e-22
UniRef50_Q7FAL6 Cluster: OSJNBa0071I13.18 protein; n=6; Magnolio... 105 9e-22
UniRef50_Q0CIT1 Cluster: Putative uncharacterized protein; n=1; ... 99 1e-19
UniRef50_Q4RID2 Cluster: Chromosome 8 SCAF15044, whole genome sh... 96 7e-19
UniRef50_A5K4U6 Cluster: Farnesyl pyrophosphate synthase, putati... 93 9e-18
UniRef50_Q4QBL1 Cluster: Farnesyl pyrophosphate synthase, putati... 84 4e-15
UniRef50_UPI00005A15CB Cluster: PREDICTED: similar to Farnesyl p... 83 5e-15
UniRef50_UPI0000DB7C0D Cluster: PREDICTED: similar to Farnesyl p... 83 1e-14
UniRef50_Q5DC19 Cluster: SJCHGC02430 protein; n=1; Schistosoma j... 81 3e-14
UniRef50_O59703 Cluster: Farnesyl pyrophosphate synthetase; n=1;... 80 7e-14
UniRef50_A2ZWU6 Cluster: Putative uncharacterized protein; n=2; ... 78 2e-13
UniRef50_Q55EU7 Cluster: Putative uncharacterized protein; n=1; ... 77 4e-13
UniRef50_Q197X6 Cluster: Farnesyl diphosphate synthase; n=2; Tox... 76 1e-12
UniRef50_Q4UAU6 Cluster: Farnesyl pyrophosphate synthetase, puta... 75 1e-12
UniRef50_A2E130 Cluster: Polyprenyl synthetase family protein; n... 74 4e-12
UniRef50_O62336 Cluster: Putative uncharacterized protein; n=2; ... 73 1e-11
UniRef50_UPI00005A125B Cluster: PREDICTED: similar to Farnesyl p... 69 1e-10
UniRef50_A2EN50 Cluster: Polyprenyl synthetase family protein; n... 60 4e-08
UniRef50_Q5CLA5 Cluster: Farnesyl pyrophosphate synthase; n=3; C... 60 6e-08
UniRef50_A7AX33 Cluster: Farnesyl pyrophosphate synthetase , put... 58 2e-07
UniRef50_Q7R2I4 Cluster: GLP_623_14387_13164; n=1; Giardia lambl... 54 4e-06
UniRef50_Q8SQS0 Cluster: FARNESYL PYROPHOSPHATE SYNTHETASE; n=1;... 52 1e-05
UniRef50_UPI000038E5D8 Cluster: hypothetical protein Faci_030012... 46 0.001
UniRef50_Q0JWJ4 Cluster: Putative geranylgeranyl diphosphate syn... 44 0.004
UniRef50_Q8NT37 Cluster: Geranylgeranyl pyrophosphate synthase; ... 43 0.007
UniRef50_Q79ZL1 Cluster: Polyprenyl diphosphate synthase; n=4; S... 42 0.013
UniRef50_P74906 Cluster: Geranylgeranyl diphosphate synthetase; ... 42 0.017
UniRef50_A1R1M5 Cluster: Putative geranylgeranyl pyrophosphate s... 42 0.017
UniRef50_Q9RVU0 Cluster: Polyprenyl synthase; n=4; Deinococci|Re... 40 0.050
UniRef50_P54383 Cluster: Geranyltranstransferase; n=27; Bacteria... 40 0.050
UniRef50_Q3SAB7 Cluster: Geranylgeranyl pyrophosphate synthase; ... 40 0.067
UniRef50_UPI0000DB7AE1 Cluster: PREDICTED: hypothetical protein;... 40 0.088
UniRef50_A3HX57 Cluster: Putative isoprenoid biosynthesis relate... 40 0.088
UniRef50_Q97C41 Cluster: Farnesyl pyrophosphate synthase; n=3; T... 40 0.088
UniRef50_A2SRA1 Cluster: Polyprenyl synthetase; n=3; Methanomicr... 40 0.088
UniRef50_A7BDF8 Cluster: Putative uncharacterized protein; n=1; ... 39 0.15
UniRef50_A3TKC8 Cluster: Putative polyprenyl synthase / dimethyl... 39 0.15
UniRef50_Q64BF4 Cluster: Bifunctional short chain isoprenyl diph... 39 0.15
UniRef50_Q5KSN3 Cluster: Geranylgeranyl diphosphate synthase; n=... 38 0.20
UniRef50_A0JV81 Cluster: Polyprenyl synthetase; n=2; Actinomycet... 38 0.20
UniRef50_A5PJD2 Cluster: MGC152321 protein; n=6; Eutheria|Rep: M... 38 0.20
UniRef50_Q1V225 Cluster: Octaprenyl-diphosphate synthase; n=3; B... 38 0.36
UniRef50_Q0SF88 Cluster: Polyprenyl synthetase; n=17; Actinomyce... 38 0.36
UniRef50_A6C8V0 Cluster: Polyprenyl synthetase; n=1; Planctomyce... 38 0.36
UniRef50_Q5JWR5 Cluster: Protein dopey-1; n=25; Deuterostomia|Re... 38 0.36
UniRef50_Q8UBX7 Cluster: Geranyltranstransferase; n=4; Rhizobium... 37 0.47
UniRef50_Q4AET3 Cluster: Farnesyltranstransferase; n=1; Chlorobi... 37 0.47
UniRef50_Q2I775 Cluster: PlaT4; n=1; Streptomyces sp. Tu6071|Rep... 37 0.47
UniRef50_Q9V077 Cluster: IdsA-like multifunctional short chain i... 37 0.47
UniRef50_Q9HQI3 Cluster: Geranylgeranyl diphosphate synthase; n=... 37 0.47
UniRef50_Q58270 Cluster: Bifunctional short chain isoprenyl diph... 37 0.47
UniRef50_Q11XW6 Cluster: Geranyltranstransferase; n=3; Sphingoba... 37 0.62
UniRef50_A0CU85 Cluster: Chromosome undetermined scaffold_28, wh... 37 0.62
UniRef50_A7DRA7 Cluster: Polyprenyl synthetase; n=1; Candidatus ... 37 0.62
UniRef50_A3CXK9 Cluster: Polyprenyl synthetase; n=1; Methanocull... 37 0.62
UniRef50_Q83N10 Cluster: Geranylgeranyl pyrophosphate synthase; ... 36 1.1
UniRef50_Q6AE53 Cluster: Geranylgeranyl pyrophosphate synthase; ... 36 1.1
UniRef50_A5DBM0 Cluster: Putative uncharacterized protein; n=1; ... 36 1.1
UniRef50_A7IAG2 Cluster: Farnesyltranstransferase; n=1; Candidat... 36 1.1
UniRef50_Q9RUJ1 Cluster: Geranylgeranyl diphosphate synthase; n=... 36 1.4
UniRef50_Q8G4G0 Cluster: Probably bifunctional short chain isopr... 36 1.4
UniRef50_A1SLA1 Cluster: Polyprenyl synthetase; n=1; Nocardioide... 36 1.4
UniRef50_A3DLU2 Cluster: Polyprenyl synthetase; n=1; Staphylothe... 36 1.4
UniRef50_Q4SSX9 Cluster: Chromosome 8 SCAF14344, whole genome sh... 35 1.9
UniRef50_O05708 Cluster: Octaprenyl-diphosphate synthase; n=1; T... 35 1.9
UniRef50_Q54193 Cluster: Geranylgeranyl pyrophosphate synthase; ... 35 1.9
UniRef50_A2RHR5 Cluster: Prenyl transferase; n=3; Lactococcus la... 35 1.9
UniRef50_A1R5E5 Cluster: Putative polyprenyl synthetase; n=1; Ar... 35 1.9
UniRef50_A3GFK9 Cluster: Predicted protein; n=3; Saccharomycetal... 35 1.9
UniRef50_Q9RIY0 Cluster: Putative geranylgeranyl pyrophosphate s... 35 2.5
UniRef50_Q3ACT5 Cluster: Heptaprenyl diphosphate synthase compon... 35 2.5
UniRef50_Q26HU1 Cluster: Polyprenyl synthetase; n=14; Bacteroide... 35 2.5
UniRef50_A7BUP3 Cluster: Putative uncharacterized protein; n=1; ... 35 2.5
UniRef50_A6LMQ9 Cluster: Polyprenyl synthetase; n=1; Thermosipho... 35 2.5
UniRef50_Q9YB31 Cluster: Farnesylgeranyl diphosphate synthase; n... 35 2.5
UniRef50_Q9ZCE0 Cluster: Tyrosine recombinase xerC; n=10; Ricket... 35 2.5
UniRef50_Q8NNM1 Cluster: Geranylgeranyl pyrophosphate synthase; ... 34 3.3
UniRef50_Q82P04 Cluster: Putative polyprenyl diphosphate synthas... 34 3.3
UniRef50_Q5YXP1 Cluster: Polyprenyl synthase; n=1; Nocardia farc... 34 3.3
UniRef50_Q2JD77 Cluster: Polyprenyl synthetase; n=2; Frankia|Rep... 34 3.3
UniRef50_Q4W8B2 Cluster: GGPP synthase; n=2; Brevundimonas|Rep: ... 34 3.3
UniRef50_A7HJU8 Cluster: Polyprenyl synthetase; n=1; Fervidobact... 34 3.3
UniRef50_A4EBW4 Cluster: Putative uncharacterized protein; n=1; ... 34 3.3
UniRef50_A0CE39 Cluster: Chromosome undetermined scaffold_17, wh... 34 3.3
UniRef50_UPI0001509DE7 Cluster: hypothetical protein TTHERM_0028... 34 4.4
UniRef50_A5P6P0 Cluster: Polyprenyl synthetase; n=1; Erythrobact... 33 5.8
UniRef50_A3JEZ4 Cluster: Putative polyprenyl diphosphate synthas... 33 5.8
UniRef50_Q0UDQ3 Cluster: Putative uncharacterized protein; n=1; ... 33 5.8
UniRef50_A1RWE7 Cluster: Polyprenyl synthetase; n=1; Thermofilum... 33 5.8
UniRef50_O14207 Cluster: Uncharacterized protein C6B12.02c; n=1;... 33 5.8
UniRef50_P31171 Cluster: Prenyl transferase; n=8; cellular organ... 33 5.8
UniRef50_P95999 Cluster: Geranylgeranyl pyrophosphate synthetase... 33 5.8
UniRef50_UPI00015B5668 Cluster: PREDICTED: similar to dipeptidyl... 33 7.7
UniRef50_Q2RM43 Cluster: Polyprenyl synthetase; n=1; Moorella th... 33 7.7
UniRef50_Q9S5E9 Cluster: SelF-HepPS; n=1; Synechococcus elongatu... 33 7.7
UniRef50_Q0C4D6 Cluster: Polyprenyl synthetase; n=4; Alphaproteo... 33 7.7
UniRef50_Q2UV12 Cluster: Geranylgeranyl pyrophosphate synthase/P... 33 7.7
UniRef50_Q8ZXZ8 Cluster: Polyprenyl synthetase; n=6; Thermoprote... 33 7.7
UniRef50_Q9VR91 Cluster: Probable E3 ubiquitin-protein ligase HE... 33 7.7
>UniRef50_A5A7A5 Cluster: Farnesyl diphosphate synthase 2; n=1;
Bombyx mori|Rep: Farnesyl diphosphate synthase 2 -
Bombyx mori (Silk moth)
Length = 382
Score = 430 bits (1060), Expect = e-119
Identities = 197/198 (99%), Positives = 197/198 (99%)
Frame = +3
Query: 153 MSVFNCLKFTRKVTYKYWPQLIRYKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQN 332
MSVFNCLKFTRKVTYKYWPQLIRYKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQN
Sbjct: 1 MSVFNCLKFTRKVTYKYWPQLIRYKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQN 60
Query: 333 KSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWC 512
KSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWC
Sbjct: 61 KSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWC 120
Query: 513 VEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTNFRTN 692
VEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTNFRTN
Sbjct: 121 VEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTNFRTN 180
Query: 693 PNYMKMFELFNETXWRTS 746
PNYMKMFELFNET WRTS
Sbjct: 181 PNYMKMFELFNETLWRTS 198
>UniRef50_Q1XAB1 Cluster: Farnesyl diphosphate synthase-like
protein; n=2; Choristoneura fumiferana|Rep: Farnesyl
diphosphate synthase-like protein - Choristoneura
fumiferana (Spruce budworm)
Length = 397
Score = 184 bits (447), Expect = 3e-45
Identities = 79/156 (50%), Positives = 113/156 (72%)
Frame = +3
Query: 279 EKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEK 458
+K+ F+D+LP ++ T+ S+L+EVP++ +WLKK+L YNL GGK RG+TT+ +Y+ +EK
Sbjct: 58 KKESFEDVLPSILNTITTNSELTEVPEVANWLKKVLEYNLAGGKKARGLTTLFAYEMLEK 117
Query: 459 PEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDS 638
PE +TE T+ +A LGWCVE+ Q + ++LDDIMDGS+ RRG+PCWY+ PEVG+ A NDS
Sbjct: 118 PENITEETIYLAKTLGWCVEILQGFLVMLDDIMDGSTTRRGVPCWYQLPEVGL-AAVNDS 176
Query: 639 LLIHSSLFEFLKTNFRTNPNYMKMFELFNETXWRTS 746
L+ SS+F L +F Y + ELFNE+ TS
Sbjct: 177 SLMFSSIFYVLHAHFADKKIYTNLVELFNESLMHTS 212
>UniRef50_A5A7A6 Cluster: Farnesyl diphosphate synthase 3; n=1;
Bombyx mori|Rep: Farnesyl diphosphate synthase 3 -
Bombyx mori (Silk moth)
Length = 385
Score = 172 bits (418), Expect = 9e-42
Identities = 76/160 (47%), Positives = 107/160 (66%)
Frame = +3
Query: 267 EIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYK 446
+I E++ F D +I L K +++P++G W+KK+L YN+ GGK RGITTV++Y+
Sbjct: 42 QIAKERETFQDAWKGIIDNLTTNKKFTQLPELGSWVKKVLEYNVKGGKKIRGITTVLAYE 101
Query: 447 TIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCA 626
EKPE VTE +++A GWC EM QAY I+ DDIMDGSS RRG+PCWYR P+VG+ A
Sbjct: 102 LFEKPENVTEEMVRLARVAGWCTEMLQAYLIMNDDIMDGSSTRRGVPCWYRMPDVGLG-A 160
Query: 627 FNDSLLIHSSLFEFLKTNFRTNPNYMKMFELFNETXWRTS 746
ND++L++ S++E LK F Y + ++FNE TS
Sbjct: 161 INDAILVYGSIYEILKIYFGKAKEYADILDIFNEALLYTS 200
>UniRef50_Q09152 Cluster: Farnesyl pyrophosphate synthetase 1,
mitochondrial precursor (FPP synthetase 1) (FPS 1)
(Farnesyl diphosphate synthetase 1) [Includes:
Dimethylallyltranstransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10)]; n=61;
Spermatophyta|Rep: Farnesyl pyrophosphate synthetase 1,
mitochondrial precursor (FPP synthetase 1) (FPS 1)
(Farnesyl diphosphate synthetase 1) [Includes:
Dimethylallyltranstransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10)] - Arabidopsis
thaliana (Mouse-ear cress)
Length = 384
Score = 137 bits (332), Expect = 2e-31
Identities = 69/178 (38%), Positives = 106/178 (59%)
Frame = +3
Query: 213 LIRYKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHY 392
L R + S++M T K+ + + DLL + N+S+L W+ +ML Y
Sbjct: 32 LYRRRIQSSSMETDLKSTFLNVYSVLKSDLLHDPSFEFTNESRL--------WVDRMLDY 83
Query: 393 NLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSV 572
N+ GGK RG++ V S+K +++ +TE + ++C LGWC+E QAY +VLDDIMD S
Sbjct: 84 NVRGGKLNRGLSVVDSFKLLKQGNDLTEQEVFLSCALGWCIEWLQAYFLVLDDIMDNSVT 143
Query: 573 RRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTNFRTNPNYMKMFELFNETXWRTS 746
RRG PCW+R P+VG+ A ND +L+ + + LK +FR P Y+ + +LFNE +T+
Sbjct: 144 RRGQPCWFRVPQVGMV-AINDGILLRNHIHRILKKHFRDKPYYVDLVDLFNEVELQTA 200
>UniRef50_P0C565 Cluster: Chrysanthemyl diphosphate synthase,
chloroplast precursor; n=2; Anthemideae|Rep:
Chrysanthemyl diphosphate synthase, chloroplast
precursor - Tanacetum cinerariifolium (Dalmatian daisy)
(Chrysanthemumcinerariifolium)
Length = 395
Score = 135 bits (326), Expect = 1e-30
Identities = 60/125 (48%), Positives = 85/125 (68%)
Frame = +3
Query: 369 WLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLD 548
W+++M+ YN+ GGK RG + V SY+ + K E++TE +AC LGWC E QA+ +VLD
Sbjct: 88 WVERMIDYNVPGGKMVRGYSVVDSYQLL-KGEELTEDEAFLACALGWCTEWLQAFILVLD 146
Query: 549 DIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTNFRTNPNYMKMFELFNE 728
DIMDGS RRG PCW+R PEVG+ A ND +L+ + + LK F+ P Y+ + +LFNE
Sbjct: 147 DIMDGSHTRRGQPCWFRLPEVGVV-AINDGVLLRNHVHRILKKYFQGKPYYVHLLDLFNE 205
Query: 729 TXWRT 743
T ++T
Sbjct: 206 TEFQT 210
>UniRef50_Q56CY8 Cluster: Farnesyl diphosphate synthase; n=16;
Neoptera|Rep: Farnesyl diphosphate synthase - Anthonomus
grandis (Boll weevil)
Length = 438
Score = 130 bits (314), Expect = 4e-29
Identities = 59/164 (35%), Positives = 99/164 (60%)
Frame = +3
Query: 255 SKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTV 434
S L + + F L P+++ L + E+P + + ++L YN+ GK RG+ +
Sbjct: 90 SSTLVSKEQSRDFMALFPDLVRELTELGRNPELPDVMRRVARVLQYNVPNGKKNRGLILI 149
Query: 435 ISYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVG 614
+YK +E P+ +T +K+A LGWC+EM + +VLDDIMD S RRG CWYR+ +G
Sbjct: 150 SAYKMLEDPKNLTPENIKLASVLGWCLEMIHSCFLVLDDIMDNSETRRGSLCWYRQNGIG 209
Query: 615 ITCAFNDSLLIHSSLFEFLKTNFRTNPNYMKMFELFNETXWRTS 746
++ A ND L++ ++++ LK + R +P Y+ + ELF+ET +T+
Sbjct: 210 LS-AINDGLILENAVYTLLKMHLRDHPAYVPIIELFHETVSKTT 252
>UniRef50_Q7KN61 Cluster: GM06581p; n=6; Endopterygota|Rep: GM06581p
- Drosophila melanogaster (Fruit fly)
Length = 419
Score = 128 bits (310), Expect = 1e-28
Identities = 57/157 (36%), Positives = 95/157 (60%)
Frame = +3
Query: 276 NEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIE 455
+E + F + P+++ + +K W ++L YN+ GK RGI TV++YK +
Sbjct: 82 DESRDFMAVFPDLVRDITTVTKAYNCSDAAKWFAQVLQYNVPRGKKNRGILTVLTYKNLV 141
Query: 456 KPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFND 635
+ +T +K+A LGWCVEM Q++ I+ DD+MD S+ RRG PCW++ VG+T A ND
Sbjct: 142 PTQDLTPENIKLAQYLGWCVEMLQSFFIISDDVMDNSTTRRGQPCWHKVENVGLT-AIND 200
Query: 636 SLLIHSSLFEFLKTNFRTNPNYMKMFELFNETXWRTS 746
+L+I ++++ LK +F Y+ + ELF+E + T+
Sbjct: 201 ALMIENAMYAILKKHFSHLDCYVALMELFHEITYITT 237
>UniRef50_P14324 Cluster: Farnesyl pyrophosphate synthetase (FPP
synthetase) (FPS) (Farnesyl diphosphate synthetase)
[Includes: Dimethylallyltranstransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10)]; n=44;
Eukaryota|Rep: Farnesyl pyrophosphate synthetase (FPP
synthetase) (FPS) (Farnesyl diphosphate synthetase)
[Includes: Dimethylallyltranstransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10)] - Homo sapiens
(Human)
Length = 353
Score = 125 bits (302), Expect = 1e-27
Identities = 56/133 (42%), Positives = 88/133 (66%), Gaps = 3/133 (2%)
Frame = +3
Query: 354 PQIGDW---LKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMF 524
P+IGD LK++L YN +GGK+ RG+T V++++ + +P K +L+ A +GWCVE+
Sbjct: 36 PEIGDAIARLKEVLEYNAIGGKYNRGLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELL 95
Query: 525 QAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTNFRTNPNYM 704
QA+ +V DDIMD S RRG CWY++P VG+ A ND+ L+ + ++ LK R P Y+
Sbjct: 96 QAFFLVADDIMDSSLTRRGQICWYQKPGVGLD-AINDANLLEACIYRLLKLYCREQPYYL 154
Query: 705 KMFELFNETXWRT 743
+ ELF ++ ++T
Sbjct: 155 NLIELFLQSSYQT 167
>UniRef50_P08836 Cluster: Farnesyl pyrophosphate synthetase (FPP
synthetase) (FPS) (Farnesyl diphosphate synthetase)
[Includes: Dimethylallyltranstransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10)]; n=16;
Fungi/Metazoa group|Rep: Farnesyl pyrophosphate
synthetase (FPP synthetase) (FPS) (Farnesyl diphosphate
synthetase) [Includes: Dimethylallyltranstransferase (EC
2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] -
Gallus gallus (Chicken)
Length = 367
Score = 125 bits (301), Expect = 1e-27
Identities = 62/158 (39%), Positives = 96/158 (60%), Gaps = 3/158 (1%)
Frame = +3
Query: 279 EKKMFDDLLPEVIMTLQNKSKLSEVPQIGDW---LKKMLHYNLVGGKHTRGITTVISYKT 449
E++ F P+++ L + + P++GD LK++L YN GGK RG+T V +Y+
Sbjct: 27 EREEFVGFFPQIVRDL-TEDGIGH-PEVGDAVARLKEVLQYNAPGGKCNRGLTVVAAYRE 84
Query: 450 IEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAF 629
+ P + +L+ A +GWC+E+FQA+ +V DDIMD S RRG CWY++ VG+ A
Sbjct: 85 LSGPGQKDAESLRCALAVGWCIELFQAFFLVADDIMDQSLTRRGQLCWYKKEGVGLD-AI 143
Query: 630 NDSLLIHSSLFEFLKTNFRTNPNYMKMFELFNETXWRT 743
NDS L+ SS++ LK R P Y+ + ELF +T ++T
Sbjct: 144 NDSFLLESSVYRVLKKYCRQRPYYVHLLELFLQTAYQT 181
>UniRef50_Q01KM5 Cluster: OSIGBa0158D24.4 protein; n=4; Oryza
sativa|Rep: OSIGBa0158D24.4 protein - Oryza sativa
(Rice)
Length = 392
Score = 123 bits (296), Expect = 6e-27
Identities = 54/126 (42%), Positives = 80/126 (63%)
Frame = +3
Query: 369 WLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLD 548
WL +M+ YN+ GGK RG++ + SY +++ +VTE +AC LGWCVE FQA ++LD
Sbjct: 84 WLAQMIDYNVPGGKLNRGLSVIDSYLLLKQGSEVTEDDFFLACVLGWCVEWFQACALLLD 143
Query: 549 DIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTNFRTNPNYMKMFELFNE 728
DIMD S RR CWYRRPEVG+ ND +++ + +K FR P ++ + E+++E
Sbjct: 144 DIMDDSHTRRDQICWYRRPEVGLR-GINDGIILKCHILIMIKKYFREKPYFLDLLEIWSE 202
Query: 729 TXWRTS 746
+TS
Sbjct: 203 IALQTS 208
>UniRef50_P08524 Cluster: Farnesyl pyrophosphate synthetase (FPP
synthetase) (FPS) (Farnesyl diphosphate synthetase)
[Includes: Dimethylallyltranstransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10)]; n=32; Fungi|Rep:
Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)
(Farnesyl diphosphate synthetase) [Includes:
Dimethylallyltranstransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10)] - Saccharomyces
cerevisiae (Baker's yeast)
Length = 352
Score = 116 bits (279), Expect = 6e-25
Identities = 55/157 (35%), Positives = 93/157 (59%), Gaps = 3/157 (1%)
Frame = +3
Query: 282 KKMFDDLLPEVIMTLQNKSKLSEVPQIG-DWLKKMLHYNLVGGKHTRGITTVISYKTIEK 458
++ F ++ P+++ L +P+ DW L+YN GGK RG++ V +Y +
Sbjct: 9 RERFLNVFPKLVEELNASLLAYGMPKEACDWYAHSLNYNTPGGKLNRGLSVVDTYAILSN 68
Query: 459 P--EKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFN 632
E++ + + LGWC+E+ QAY +V DD+MD S RRG PCWY+ PEVG A N
Sbjct: 69 KTVEQLGQEEYEKVAILGWCIELLQAYFLVADDMMDKSITRRGQPCWYKVPEVG-EIAIN 127
Query: 633 DSLLIHSSLFEFLKTNFRTNPNYMKMFELFNETXWRT 743
D+ ++ +++++ LK++FR Y+ + ELF+E ++T
Sbjct: 128 DAFMLEAAIYKLLKSHFRNEKYYIDITELFHEVTFQT 164
>UniRef50_A4RUB9 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 348
Score = 114 bits (275), Expect = 2e-24
Identities = 54/129 (41%), Positives = 80/129 (62%), Gaps = 2/129 (1%)
Frame = +3
Query: 366 DWLKKMLHYNLVGGKHTRGITTVISYKTIE--KPEKVTEHTLKMACKLGWCVEMFQAYCI 539
+W+K+M+ YN+ GK RG+ V + ++ K E V E LK A +GWC+E QAY +
Sbjct: 37 EWIKRMIDYNVPHGKLNRGLAVVDGVRALKAAKNETVDEEELKRAMVVGWCIEFLQAYFL 96
Query: 540 VLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTNFRTNPNYMKMFEL 719
V DDIMD S RRG PCWYR+P+V +T A ND +L+ L++ LK + Y + EL
Sbjct: 97 VADDIMDESVTRRGQPCWYRQPDVKMT-AINDGILLEMMLYKCLKKYCKGLECYADLVEL 155
Query: 720 FNETXWRTS 746
F++ ++T+
Sbjct: 156 FHDVTYQTA 164
>UniRef50_A2R6Y8 Cluster: Contig An16c0060, complete genome; n=1;
Aspergillus niger|Rep: Contig An16c0060, complete genome
- Aspergillus niger
Length = 349
Score = 114 bits (274), Expect = 3e-24
Identities = 59/154 (38%), Positives = 89/154 (57%), Gaps = 1/154 (0%)
Frame = +3
Query: 279 EKKMFDDLLPEVIMTLQNKSKLSEVPQ-IGDWLKKMLHYNLVGGKHTRGITTVISYKTIE 455
++ FD +L E++ + + PQ + ++++K + N GK RG++ + +I
Sbjct: 6 DRSKFDGVLAELVADVLEHFASNGAPQEVKNYVEKCFYENSTNGKMLRGLSVPQTGLSI- 64
Query: 456 KPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFND 635
VTE C LGW VE+ QAY + DDIMD SS RRG PCWYR P VG+ A ND
Sbjct: 65 LGRPVTEQEYHDLCVLGWLVELLQAYLLTHDDIMDNSSTRRGKPCWYRLPSVGMK-AVND 123
Query: 636 SLLIHSSLFEFLKTNFRTNPNYMKMFELFNETXW 737
L+ SS+F LK +F+T+P Y+++ E F+E +
Sbjct: 124 GSLLRSSIFFLLKQHFQTHPAYLRIMETFHEVSF 157
>UniRef50_Q54XP0 Cluster: Farnesyl diphosphate synthase; n=3;
Dictyostelium discoideum|Rep: Farnesyl diphosphate
synthase - Dictyostelium discoideum AX4
Length = 382
Score = 111 bits (268), Expect = 1e-23
Identities = 61/183 (33%), Positives = 102/183 (55%), Gaps = 7/183 (3%)
Frame = +3
Query: 216 IRYKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYN 395
+ SA + TA + E+ + ++F L E++ L + PQ W++KM++ N
Sbjct: 22 LNMNQTSAPIKTAKE--ELADFVEIFPILTNEILKELPG---MDMPPQTIAWVEKMINVN 76
Query: 396 LVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVR 575
+ GGK RG+T + S + + + +++ + +A LGWCVE QA+ +V DDIMD S R
Sbjct: 77 VSGGKMNRGLTVLHSLQLLVEGRQLSRSEIFLANVLGWCVEWLQAFFLVADDIMDQSITR 136
Query: 576 RGMPCWYRRPE-------VGITCAFNDSLLIHSSLFEFLKTNFRTNPNYMKMFELFNETX 734
RG PCWYR+ +G + A NDS ++ S ++ +K FR P Y + ++F+ET
Sbjct: 137 RGQPCWYRQANPISNNGTIG-SIAINDSFILESCIYILIKKYFRNEPYYADILDIFHETS 195
Query: 735 WRT 743
++T
Sbjct: 196 YQT 198
>UniRef50_A5DDW6 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 388
Score = 111 bits (266), Expect = 2e-23
Identities = 57/139 (41%), Positives = 83/139 (59%), Gaps = 4/139 (2%)
Frame = +3
Query: 339 KLSEVPQIG-DWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTE---HTLKMACKLG 506
KL +P+ W YN+ GGK RG++ V +Y I K +KV E LK LG
Sbjct: 65 KLYSMPEEAIKWFSDSFSYNVPGGKLNRGLSVVDTY-AILKGKKVNELESDELKKVTILG 123
Query: 507 WCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTNFR 686
WCVEM QA+ +V DDIMD + RRG PCWY++ VG+ A NDS ++ +++ LK F+
Sbjct: 124 WCVEMLQAFFLVADDIMDKAEKRRGHPCWYKKDGVGL-IAINDSFVLEGAIYVVLKKYFK 182
Query: 687 TNPNYMKMFELFNETXWRT 743
P Y+++ ELF++ ++T
Sbjct: 183 KEPYYVELLELFHDITFKT 201
>UniRef50_Q58GE8 Cluster: Geranyl diphosphate synthase; n=1; Ips
pini|Rep: Geranyl diphosphate synthase - Ips pini (Pine
engraver beetle)
Length = 416
Score = 110 bits (264), Expect = 4e-23
Identities = 60/182 (32%), Positives = 100/182 (54%), Gaps = 6/182 (3%)
Frame = +3
Query: 216 IRYKNNSANMTTA-SKNLEIINEK-----KMFDDLLPEVIMTLQNKSKLSEVPQIGDWLK 377
IR+K+ S+ + ++ SK++ NE+ K D++ PEV+ ++ + E+ I L+
Sbjct: 41 IRHKSRSSAVPSSLSKSMYDHNEEMKAAMKYMDEIYPEVMGQIEKVPQYEEIKPILVRLR 100
Query: 378 KMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIM 557
+ + Y + GK +G+ V +K + P+ +T +K++ LGWC E+ QAY +LDDIM
Sbjct: 101 EAIDYTVPYGKRFKGVHIVSHFKLLADPKFITPENVKLSGVLGWCAEIIQAYFCMLDDIM 160
Query: 558 DGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTNFRTNPNYMKMFELFNETXW 737
D S RRG P WY+ P +G+ A D L+ FE LK F +P+Y + E+ +
Sbjct: 161 DDSDTRRGKPTWYKLPGIGLN-AVTDVCLMEMFTFELLKRYFPKHPSYADIHEILRNLLF 219
Query: 738 RT 743
T
Sbjct: 220 LT 221
>UniRef50_Q75ND9 Cluster: Farnesyl diphosphate synthase; n=5;
Dikarya|Rep: Farnesyl diphosphate synthase - Lactarius
chrysorrheus (Yellowdrop milkcap) (Agaricus theiogalus)
Length = 381
Score = 109 bits (261), Expect = 1e-22
Identities = 59/173 (34%), Positives = 96/173 (55%), Gaps = 1/173 (0%)
Frame = +3
Query: 228 NNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIG-DWLKKMLHYNLVG 404
++SA + A+ + +K F+ + V L + +P+ ++ ++ + YN+ G
Sbjct: 10 SSSAPLPPAAAKDKKAAARKRFEGVYAVVRDDLLEDFRKHNMPEEAIEYYQRSMDYNVPG 69
Query: 405 GKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGM 584
GK RG++ V S I K ++TE A LGW VE QAY +V DDIMD S RRG
Sbjct: 70 GKLNRGMSVVDSV-AILKGRELTESEYFQAAVLGWAVEWMQAYFLVSDDIMDASITRRGQ 128
Query: 585 PCWYRRPEVGITCAFNDSLLIHSSLFEFLKTNFRTNPNYMKMFELFNETXWRT 743
PCWYR VG A ND+L++ ++F+ ++ +FR P Y+ + +L +E ++T
Sbjct: 129 PCWYRTEGVGF-MAINDALILEGAIFQMIRKHFRKEPFYVDLIDLLHEVSYQT 180
>UniRef50_Q7FAL6 Cluster: OSJNBa0071I13.18 protein; n=6;
Magnoliophyta|Rep: OSJNBa0071I13.18 protein - Oryza
sativa subsp. japonica (Rice)
Length = 407
Score = 105 bits (253), Expect = 9e-22
Identities = 49/126 (38%), Positives = 75/126 (59%)
Frame = +3
Query: 369 WLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLD 548
W+ KM+ YN+ GGK RG++ V SY + + +V + +AC LGWCVE QA +VLD
Sbjct: 99 WVAKMMDYNVPGGKLNRGLSVVDSYMLLRQGTEVDDEDFYLACVLGWCVEWLQASALVLD 158
Query: 549 DIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTNFRTNPNYMKMFELFNE 728
DI D + RR CWY+ P VG++ A ND +L+ + +K F+ ++ + EL+NE
Sbjct: 159 DITDNAYTRRDNLCWYKLPTVGMS-AINDGVLLKCHVQAIIKRYFKEKFYFLDLMELWNE 217
Query: 729 TXWRTS 746
+T+
Sbjct: 218 IGLQTA 223
>UniRef50_Q0CIT1 Cluster: Putative uncharacterized protein; n=1;
Aspergillus terreus NIH2624|Rep: Putative
uncharacterized protein - Aspergillus terreus (strain
NIH 2624)
Length = 342
Score = 99.1 bits (236), Expect = 1e-19
Identities = 61/153 (39%), Positives = 83/153 (54%), Gaps = 2/153 (1%)
Frame = +3
Query: 291 FDDLLPEVIMTLQNKSKLSEVPQ-IGDWLKKMLHYNLVGGKHTRGITTVISYKTI-EKPE 464
F +L + +Q + P I D L++ L N GK RG+T V + T+ ++P
Sbjct: 7 FKSVLEVLANEIQEDLSERKAPSAIRDRLQQCLLANTKDGKLNRGLTVVDTGCTLLQRPP 66
Query: 465 KVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLL 644
E + LGW VEMFQA +V DDIMD S RRG CWYRR EVG+T A ND+
Sbjct: 67 TPAE--FQDLSILGWMVEMFQASYLVSDDIMDNSEYRRGKLCWYRRDEVGLT-AINDAAF 123
Query: 645 IHSSLFEFLKTNFRTNPNYMKMFELFNETXWRT 743
+ S +F LK +F+ + Y+ + EL NE RT
Sbjct: 124 LKSLMFSLLKKHFQHHAEYVGILELLNEASHRT 156
>UniRef50_Q4RID2 Cluster: Chromosome 8 SCAF15044, whole genome
shotgun sequence; n=3; Tetraodontidae|Rep: Chromosome 8
SCAF15044, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 402
Score = 96.3 bits (229), Expect = 7e-19
Identities = 52/149 (34%), Positives = 82/149 (55%), Gaps = 27/149 (18%)
Frame = +3
Query: 378 KMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIM 557
++L YN+ GGK RG++ + S + + P ++T+ ++ A +GWC+E+ QA+ +V DDIM
Sbjct: 68 QVLMYNVPGGKRNRGLSVIGSLRELLPPSELTQDLVQRALLVGWCIELLQAFFLVADDIM 127
Query: 558 DGSSVRRGMPCWYRRPEV------GIT----------CAF-----------NDSLLIHSS 656
D S RRG PCWY++ + GI C F NDS L+ SS
Sbjct: 128 DASVTRRGQPCWYKKVTLDPCLKSGIVLGLSVPFYLPCVFAFQDGIGLDAINDSFLLESS 187
Query: 657 LFEFLKTNFRTNPNYMKMFELFNETXWRT 743
++ L+ + R P Y+ + ELF ET ++T
Sbjct: 188 IYRLLRRHCRGQPYYIHLLELFTETSFQT 216
>UniRef50_A5K4U6 Cluster: Farnesyl pyrophosphate synthase, putative;
n=7; Plasmodium|Rep: Farnesyl pyrophosphate synthase,
putative - Plasmodium vivax
Length = 375
Score = 92.7 bits (220), Expect = 9e-18
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 1/155 (0%)
Frame = +3
Query: 282 KKMFDDLLPEVIMTLQNKSKLSEVPQ-IGDWLKKMLHYNLVGGKHTRGITTVISYKTIEK 458
+ M+D + L S E+ + I + K + YN +GGK+ RGI ++ Y+ ++
Sbjct: 17 RNMYDKYRDAFLSHLNEYSLEEEIKEHISKYYKLLFDYNCLGGKNNRGILVILIYEYVKN 76
Query: 459 PEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDS 638
+ + K AC L WC+E+ QA +V DDIMD RR CWY +V A ND
Sbjct: 77 RDINSSEWEKAAC-LAWCIEILQAAFLVADDIMDKGETRRNKYCWYLLKDVETKNAVNDV 135
Query: 639 LLIHSSLFEFLKTNFRTNPNYMKMFELFNETXWRT 743
LL+++S+++ ++ R Y+ + F + +T
Sbjct: 136 LLLYNSIYKLIEIYLRNESCYVDVIATFRDATLKT 170
>UniRef50_Q4QBL1 Cluster: Farnesyl pyrophosphate synthase, putative;
n=11; Trypanosomatidae|Rep: Farnesyl pyrophosphate
synthase, putative - Leishmania major
Length = 362
Score = 83.8 bits (198), Expect = 4e-15
Identities = 44/130 (33%), Positives = 66/130 (50%), Gaps = 4/130 (3%)
Frame = +3
Query: 369 WLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVT----EHTLKMACKLGWCVEMFQAYC 536
+LK M+ +GGK+ RG+ V + + K ++ E L AC GW +EM QA+
Sbjct: 35 YLKSMMDTTCLGGKYNRGLCVVDVAEAMAKDTQMDAAAMERVLHDACVCGWMIEMLQAHF 94
Query: 537 IVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTNFRTNPNYMKMFE 716
+V DDIMD S RRG PCWY P V A ND L++ + + F P ++
Sbjct: 95 LVEDDIMDHSKTRRGKPCWYLHPGVTAQVAINDGLILLAWATQMALHYFADRPFLAEVLR 154
Query: 717 LFNETXWRTS 746
+F++ T+
Sbjct: 155 VFHDVDLTTT 164
>UniRef50_UPI00005A15CB Cluster: PREDICTED: similar to Farnesyl
pyrophosphate synthetase (FPP synthetase) (FPS)
(Farnesyl diphosphate synthetase); n=2; Eutheria|Rep:
PREDICTED: similar to Farnesyl pyrophosphate synthetase
(FPP synthetase) (FPS) (Farnesyl diphosphate synthetase)
- Canis familiaris
Length = 262
Score = 83.4 bits (197), Expect = 5e-15
Identities = 36/98 (36%), Positives = 63/98 (64%)
Frame = +3
Query: 450 IEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAF 629
I + ++V E+ A +GWC+E+ QA+ +V DDIMD S ++G CWY++P +G+ A
Sbjct: 42 IAQLKEVLEYNAVGALTVGWCMELLQAFFLVSDDIMDSSLTQQGQICWYQKPGIGLD-AI 100
Query: 630 NDSLLIHSSLFEFLKTNFRTNPNYMKMFELFNETXWRT 743
ND+LL+ + ++ LK + P Y+ + ELF ++ ++T
Sbjct: 101 NDALLLEACIYCLLKVYCQEQPYYLDLIELFLQSSYQT 138
>UniRef50_UPI0000DB7C0D Cluster: PREDICTED: similar to Farnesyl
pyrophosphate synthase CG12389-PA, partial; n=7; Apis
mellifera|Rep: PREDICTED: similar to Farnesyl
pyrophosphate synthase CG12389-PA, partial - Apis
mellifera
Length = 545
Score = 82.6 bits (195), Expect = 1e-14
Identities = 46/168 (27%), Positives = 86/168 (51%)
Frame = +3
Query: 219 RYKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNL 398
R K+N S N +E+ + P ++ L K E+ + W+ ++L YN+
Sbjct: 210 RLKSNKVRRLVDSFN----DERNKLMTVWPNIVNEL-TKDNNEELLDVNKWITEVLEYNV 264
Query: 399 VGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRR 578
G R ++ VI+ K + ++TE ++A L WC+E+ QA + DDI+D +++RR
Sbjct: 265 PKGGKRRSVSFVIACKLLTSQNQLTEENTRLAHILAWCIEIMQAVHTMADDILDHANMRR 324
Query: 579 GMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTNFRTNPNYMKMFELF 722
P W+ ++G+ A ND LLI + +++ ++ F++ Y + F
Sbjct: 325 NQPAWH--VKIGL-FAVNDILLIETCIYKLIQKYFKSKNCYGDIMNTF 369
Score = 33.5 bits (73), Expect = 5.8
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +3
Query: 525 QAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLL 644
QA+ ++DDI+D +++RR P W+ + +G A ND ++
Sbjct: 2 QAFHTMIDDILDNANMRRNQPTWHVKVGLG---AINDDIV 38
>UniRef50_Q5DC19 Cluster: SJCHGC02430 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02430 protein - Schistosoma
japonicum (Blood fluke)
Length = 386
Score = 81.0 bits (191), Expect = 3e-14
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 15/182 (8%)
Frame = +3
Query: 243 MTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRG 422
M TA +++ K++F+ + ++L ++ + + ++ YNL GK RG
Sbjct: 1 MPTADLHIKFREVKEIFESYF-DTFVSLLHRGYPKSLELAKQHFQNVVSYNLSSGKRIRG 59
Query: 423 ITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWY-- 596
+ V+SY + +L +GWCVE+ A +VLDDI+D S++RRG PCW+
Sbjct: 60 VLVVLSYLVFRNKNDDPKRSLSFVYLIGWCVELLHAGFLVLDDIIDNSTLRRGQPCWHLT 119
Query: 597 ----RRPEVGIT----CAFNDSLLIHSSLFEFLKT-NFR----TNPNYMKMFELFNETXW 737
R +GI + +IHS F++ T N N +K+ +LF+E +
Sbjct: 120 QANLNRGLIGINDGLHLVLSAKYVIHSLFFQYQDTVNLHMWKDQNNVCLKLCKLFDEISY 179
Query: 738 RT 743
+T
Sbjct: 180 KT 181
>UniRef50_O59703 Cluster: Farnesyl pyrophosphate synthetase; n=1;
Schizosaccharomyces pombe|Rep: Farnesyl pyrophosphate
synthetase - Schizosaccharomyces pombe (Fission yeast)
Length = 351
Score = 79.8 bits (188), Expect = 7e-14
Identities = 47/155 (30%), Positives = 78/155 (50%), Gaps = 1/155 (0%)
Frame = +3
Query: 282 KKMFDDLLPEVIMTLQN-KSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEK 458
KK D P V+ ++ + P+ + L + N +GGK+ RG+ + S ++
Sbjct: 12 KKRLLDFFPVVLEGIREILESMQYFPEETEKLLYSIKRNTLGGKNNRGLAVLQSLTSLIN 71
Query: 459 PEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDS 638
E + E + A LGW +E+ Q ++ DDIMD S RRG+ CWY VG+ A N+S
Sbjct: 72 RE-LEEAEFRDAALLGWLIEILQGCFLMADDIMDQSIKRRGLDCWYL--VVGVRRAINES 128
Query: 639 LLIHSSLFEFLKTNFRTNPNYMKMFELFNETXWRT 743
L+ + + ++ FR P Y+ + + F E + T
Sbjct: 129 QLLEACIPLLIRKYFRNMPYYVDLLDTFREVTFLT 163
>UniRef50_A2ZWU6 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 306
Score = 78.2 bits (184), Expect = 2e-13
Identities = 45/122 (36%), Positives = 64/122 (52%)
Frame = +3
Query: 381 MLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMD 560
ML YN++GG+ ++ KP T + GW QAY +VLDDIMD
Sbjct: 52 MLDYNVLGGEKN-----MLFRNNATKPNNGT-------LRYGW---QLQAYFLVLDDIMD 96
Query: 561 GSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTNFRTNPNYMKMFELFNETXWR 740
S RRG PCW+R P+VG+ A ND L++ S + + FR Y+ + +LFNE +
Sbjct: 97 NSQTRRGKPCWFRLPKVGL-IAINDGLVLRSQISRIFRRYFRGKSYYVDLLDLFNEVEIQ 155
Query: 741 TS 746
T+
Sbjct: 156 TT 157
>UniRef50_Q55EU7 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 393
Score = 77.4 bits (182), Expect = 4e-13
Identities = 52/148 (35%), Positives = 79/148 (53%), Gaps = 21/148 (14%)
Frame = +3
Query: 366 DWLKKMLHY-NLVGGKHTRGITTVISYKTI------------EKPEKVTEHTLKMACKLG 506
D++K++L+ + GGK RG+ + S T+ K +E + A +G
Sbjct: 42 DYIKELLNSPTITGGKMYRGLGFLYSLNTLLIAKNNFDNNNNNNNNKNSETSQHEARIIG 101
Query: 507 WCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRP--------EVGITCAFNDSLLIHSSLF 662
WC+E F ++ ++ DDIMD RRG CWYR P +VG+ A NDS+LI S LF
Sbjct: 102 WCLE-FLSFFLITDDIMDNGLTRRGELCWYRHPSPFNPTEHKVGML-AINDSVLIESFLF 159
Query: 663 EFLKTNFRTNPNYMKMFELFNETXWRTS 746
LK F+ Y+ +FELF+E+ + T+
Sbjct: 160 FILKKYFKNKSYYVDLFELFHESIFYTA 187
>UniRef50_Q197X6 Cluster: Farnesyl diphosphate synthase; n=2;
Toxoplasma gondii|Rep: Farnesyl diphosphate synthase -
Toxoplasma gondii
Length = 646
Score = 75.8 bits (178), Expect = 1e-12
Identities = 30/73 (41%), Positives = 50/73 (68%)
Frame = +3
Query: 501 LGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTN 680
LGWCVE+ Q+ +V+DD+MD S RRG CWYR +G++ A NDSL++ ++++ L+
Sbjct: 316 LGWCVELLQSCFLVMDDVMDHSLTRRGKQCWYRCDGIGVSNAVNDSLVLEAAVYRVLREY 375
Query: 681 FRTNPNYMKMFEL 719
+P Y+++ +L
Sbjct: 376 LGDHPAYVQLQDL 388
>UniRef50_Q4UAU6 Cluster: Farnesyl pyrophosphate synthetase,
putative; n=2; Theileria|Rep: Farnesyl pyrophosphate
synthetase, putative - Theileria annulata
Length = 384
Score = 75.4 bits (177), Expect = 1e-12
Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 13/165 (7%)
Frame = +3
Query: 288 MFDDLLPEVIMTLQNKSKLSEVPQ-IGDWLKKMLHYNLVGGKHTRG---ITTVISYKTIE 455
+ D P+ + N+ K + Q + + + YNL GGK RG ++TV S
Sbjct: 18 LLKDFFPKFLELAINELKTYGLSQNVLLYYSYAVQYNLQGGKMLRGTMVLSTVKSLCGTN 77
Query: 456 KPEKVTEHTLKMACK---------LGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPE 608
PE + TL + + WCVE+ Q +V DDI+D S+ RR CWY P
Sbjct: 78 IPENLMTQTLIVGMYNSNHLKQFIVAWCVELLQTSFLVADDIIDKSTKRRSNTCWYLVPT 137
Query: 609 VGITCAFNDSLLIHSSLFEFLKTNFRTNPNYMKMFELFNETXWRT 743
+G++ A ND + +++ ++ L + + ++++ E FN T
Sbjct: 138 IGVSNAINDVMFLYTLIYRILFNTMKDSKKFLEIIETFNRVSMTT 182
>UniRef50_A2E130 Cluster: Polyprenyl synthetase family protein; n=2;
Trichomonas vaginalis G3|Rep: Polyprenyl synthetase
family protein - Trichomonas vaginalis G3
Length = 334
Score = 73.7 bits (173), Expect = 4e-12
Identities = 43/117 (36%), Positives = 59/117 (50%), Gaps = 5/117 (4%)
Frame = +3
Query: 366 DWLKK----MLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFQAY 533
DW++K ML Y+ GGK RGI T Y + +E K+ LGW E+ A
Sbjct: 28 DWVQKHCIDMLEYSTKGGKMLRGIMTAAVYLELTGYSPDSEEA-KVGYYLGWVEEIIHAG 86
Query: 534 CIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFL-KTNFRTNPNY 701
++ DD+MD S RRG CWY+R E+G A ND L++ + L K + N Y
Sbjct: 87 YLIADDLMDQSETRRGQECWYKREEIG-DQAVNDGLILQDLAYVLLDKIRNKLNTKY 142
>UniRef50_O62336 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 352
Score = 72.5 bits (170), Expect = 1e-11
Identities = 33/123 (26%), Positives = 68/123 (55%)
Frame = +3
Query: 375 KKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDI 554
+ + ++GGK++R V + + ++ + L+ C+ +E+ Q++ ++ DDI
Sbjct: 42 RNLFDNTVIGGKYSRASLCVDTIRALQPHLRDETQELQAVCEAAATLEIIQSFYLIADDI 101
Query: 555 MDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTNFRTNPNYMKMFELFNETX 734
MD S RRG PCW+RR VG++ A ND+ ++ S + + L+ + N ++ E + ++
Sbjct: 102 MDNSETRRGKPCWFRREGVGMS-AINDAFIMDSFVEDILRLALPGHVNLDRLCEAYRKSK 160
Query: 735 WRT 743
+T
Sbjct: 161 QKT 163
>UniRef50_UPI00005A125B Cluster: PREDICTED: similar to Farnesyl
pyrophosphate synthetase (FPP synthetase) (FPS)
(Farnesyl diphosphate synthetase); n=1; Canis lupus
familiaris|Rep: PREDICTED: similar to Farnesyl
pyrophosphate synthetase (FPP synthetase) (FPS)
(Farnesyl diphosphate synthetase) - Canis familiaris
Length = 259
Score = 69.3 bits (162), Expect = 1e-10
Identities = 32/81 (39%), Positives = 48/81 (59%)
Frame = +3
Query: 465 KVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLL 644
K +L+ A +GWCVE+ QA+ +V DDIMD + R G CWY+ P +G+ A ND+LL
Sbjct: 26 KAVGGSLRRALSVGWCVELLQAFFLVSDDIMDLTLTRWGQICWYQNPGIGLD-AINDALL 84
Query: 645 IHSSLFEFLKTNFRTNPNYMK 707
S ++ LK+ + +K
Sbjct: 85 PESCIYRLLKSTVQVKRYVVK 105
>UniRef50_A2EN50 Cluster: Polyprenyl synthetase family protein; n=1;
Trichomonas vaginalis G3|Rep: Polyprenyl synthetase
family protein - Trichomonas vaginalis G3
Length = 338
Score = 60.5 bits (140), Expect = 4e-08
Identities = 34/105 (32%), Positives = 53/105 (50%)
Frame = +3
Query: 381 MLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMD 560
++ Y + GGK RG+ +V + + ++ + A LGW E+ QA +V DD+MD
Sbjct: 38 LVDYTIAGGKCLRGLLSVFGFLELTGYSPDSKEA-EAAYALGWVQEILQASFLVADDLMD 96
Query: 561 GSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTNFRTNP 695
S +RR PCWY E T A +DS + + L+ + F P
Sbjct: 97 KSPLRRDKPCWYCLQENKYT-AVSDSYFLENVLYMIIDKYFADFP 140
>UniRef50_Q5CLA5 Cluster: Farnesyl pyrophosphate synthase; n=3;
Cryptosporidium|Rep: Farnesyl pyrophosphate synthase -
Cryptosporidium hominis
Length = 353
Score = 60.1 bits (139), Expect = 6e-08
Identities = 48/161 (29%), Positives = 75/161 (46%), Gaps = 2/161 (1%)
Frame = +3
Query: 267 EIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYK 446
+ IN F ++ V+ L ++ + P I +L + YN+ GKH RG V+
Sbjct: 12 DFINYYDKFKVIIYNVLEKLPLNDEIRK-PVIEYYLN-CIDYNVKKGKHIRGKILVLISS 69
Query: 447 TIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWY--RRPEVGIT 620
+ ++ + LGW VE QA ++ DDIMD RRG PCWY I
Sbjct: 70 LSSAYSNIKRDSIYL---LGWVVEAIQALILIADDIMDSGKFRRGAPCWYIVHGQSNAIN 126
Query: 621 CAFNDSLLIHSSLFEFLKTNFRTNPNYMKMFELFNETXWRT 743
F +L S +FE L + F + MK+ +++NE+ + T
Sbjct: 127 DIFFLKMLSLSLIFE-LSSVF-GDDIVMKIQKIYNESIFFT 165
>UniRef50_A7AX33 Cluster: Farnesyl pyrophosphate synthetase ,
putative; n=1; Babesia bovis|Rep: Farnesyl pyrophosphate
synthetase , putative - Babesia bovis
Length = 336
Score = 58.4 bits (135), Expect = 2e-07
Identities = 31/72 (43%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Frame = +3
Query: 384 LHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLG--WCVEMFQAYCIVLDDIM 557
+ YNL GGK RG V + + I + ++E+ K+A LG WCVE+ Q +V DDIM
Sbjct: 52 IQYNLQGGKLIRGTLVVATTRCI-LGDNISEYQWKLALILGMGWCVELLQTAFLVADDIM 110
Query: 558 DGSSVRRGMPCW 593
D S +RR CW
Sbjct: 111 DKSVMRRSNLCW 122
>UniRef50_Q7R2I4 Cluster: GLP_623_14387_13164; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_623_14387_13164 - Giardia lamblia
ATCC 50803
Length = 407
Score = 54.0 bits (124), Expect = 4e-06
Identities = 40/138 (28%), Positives = 70/138 (50%), Gaps = 11/138 (7%)
Frame = +3
Query: 366 DWLKKMLHYNLVGGKHTRG-ITTVISYKTIE-------KPEKVTEHTLKMACKLGWCVEM 521
D + +++ YN+VGGK TRG + I +T+ + +E +A + E+
Sbjct: 52 DHIVEVIKYNVVGGKMTRGTLAADIFLQTVRFLFSGLLEDSNFSEELFNLAIDICLVQEI 111
Query: 522 FQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLL---IHSSLFEFLKTNFRTN 692
Q +++DD++D S++RRG P W R VG A ND L+ I SL +L+
Sbjct: 112 LQGAFLMIDDVIDHSTIRRGKPSW--RAVVGDEQAVNDGLILWQIADSLVLYLEDKCGKT 169
Query: 693 PNYMKMFELFNETXWRTS 746
+K+FE++++ T+
Sbjct: 170 ---LKIFEVYHQAKANTT 184
>UniRef50_Q8SQS0 Cluster: FARNESYL PYROPHOSPHATE SYNTHETASE; n=1;
Encephalitozoon cuniculi|Rep: FARNESYL PYROPHOSPHATE
SYNTHETASE - Encephalitozoon cuniculi
Length = 292
Score = 52.4 bits (120), Expect = 1e-05
Identities = 30/72 (41%), Positives = 41/72 (56%)
Frame = +3
Query: 381 MLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMD 560
+L YNL GGK R V K + +V+ L M G+ VE+ QA +++DDIMD
Sbjct: 25 LLDYNLGGGKELRYKAYVHVLKALNG--EVSMENLIM----GYSVELLQAVLLIVDDIMD 78
Query: 561 GSSVRRGMPCWY 596
S +RRG PC+Y
Sbjct: 79 NSKIRRGKPCYY 90
>UniRef50_UPI000038E5D8 Cluster: hypothetical protein Faci_03001280;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001280 - Ferroplasma acidarmanus fer1
Length = 352
Score = 46.0 bits (104), Expect = 0.001
Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 4/115 (3%)
Frame = +3
Query: 276 NEKKMFDDLLPEVIMTLQN--KSKLSEVP--QIGDWLKKMLHYNLVGGKHTRGITTVISY 443
N KK D L ++ L+ KL+E +I D + K+ + L GGK R I ++ Y
Sbjct: 7 NYKKTLDGLKDKINAQLEAYFNFKLNECDDTRIKDIIIKLRDFTLNGGKRLRPILMIMGY 66
Query: 444 KTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPE 608
+ E +K + +E+ Q++ ++ DDIMD S +RRG P +++ E
Sbjct: 67 NMFSGQD---ERIIKASIS----IELAQSFLLIHDDIMDQSDMRRGKPSFHKAVE 114
>UniRef50_Q0JWJ4 Cluster: Putative geranylgeranyl diphosphate
synthase; n=1; Streptomyces ambofaciens|Rep: Putative
geranylgeranyl diphosphate synthase - Streptomyces
ambofaciens
Length = 357
Score = 44.0 bits (99), Expect = 0.004
Identities = 28/88 (31%), Positives = 45/88 (51%)
Frame = +3
Query: 336 SKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCV 515
++ S P++ + L+ L GGK R + V+ + E L++A L
Sbjct: 36 ARRSHPPEVANTLRAFL---AAGGKRVRALLCVVGWHAAGGSEDRAA-VLRVAASL---- 87
Query: 516 EMFQAYCIVLDDIMDGSSVRRGMPCWYR 599
E+F A+ ++ DDIMD S+VRRG P +R
Sbjct: 88 ELFVAFALIHDDIMDDSAVRRGRPAVHR 115
>UniRef50_Q8NT37 Cluster: Geranylgeranyl pyrophosphate synthase;
n=14; Corynebacterineae|Rep: Geranylgeranyl
pyrophosphate synthase - Corynebacterium glutamicum
(Brevibacterium flavum)
Length = 350
Score = 43.2 bits (97), Expect = 0.007
Identities = 28/92 (30%), Positives = 48/92 (52%)
Frame = +3
Query: 381 MLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMD 560
++H GGK R + +++ + EKP ++E+ +K A VE+ + DD+MD
Sbjct: 64 VMHLTRAGGKRFRPMFALLASEFGEKP--LSENVIKAAV----VVEITHLATLYHDDVMD 117
Query: 561 GSSVRRGMPCWYRRPEVGITCAFNDSLLIHSS 656
+S+RRG+P R + + D LL H+S
Sbjct: 118 EASMRRGVPSANARWDNSVAILAGDILLAHAS 149
>UniRef50_Q79ZL1 Cluster: Polyprenyl diphosphate synthase; n=4;
Streptomyces|Rep: Polyprenyl diphosphate synthase -
Streptomyces avermitilis
Length = 413
Score = 42.3 bits (95), Expect = 0.013
Identities = 24/74 (32%), Positives = 38/74 (51%)
Frame = +3
Query: 366 DWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVL 545
D +++ + L GGK TR +++ P E L++ G +E+ Q +V
Sbjct: 60 DIAERVARFTLDGGKRTRSQFVWWAHRACGGPAAGAEAALRV----GAALELIQTCALVH 115
Query: 546 DDIMDGSSVRRGMP 587
DD+MDGS +RRG P
Sbjct: 116 DDVMDGSRLRRGRP 129
>UniRef50_P74906 Cluster: Geranylgeranyl diphosphate synthetase;
n=4; Thermus thermophilus|Rep: Geranylgeranyl
diphosphate synthetase - Thermus thermophilus
Length = 344
Score = 41.9 bits (94), Expect = 0.017
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 1/149 (0%)
Frame = +3
Query: 306 PEVIMTLQNKSKLSEVPQIGDWLKKMLH-YNLVGGKHTRGITTVISYKTIEKPEKVTEHT 482
PE I + ++ + + +L Y GGK RG+ TV S P
Sbjct: 5 PETIRQALQERLIARLDHTDPLYRDLLQDYPRRGGKMLRGLLTVYSALAHGAP------- 57
Query: 483 LKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLF 662
L+ + +E+FQ + +V DDI DGS RRG P +R + + A N +H+ ++
Sbjct: 58 LEAGLETATALELFQNWVLVHDDIEDGSEERRGRPALHRLHPMPL--ALNAGDAMHAEMW 115
Query: 663 EFLKTNFRTNPNYMKMFELFNETXWRTSW 749
L ++ F+E RT++
Sbjct: 116 GLLAEGLARGLFPPEVLLEFHEVVRRTAY 144
>UniRef50_A1R1M5 Cluster: Putative geranylgeranyl pyrophosphate
synthase; n=1; Arthrobacter aurescens TC1|Rep: Putative
geranylgeranyl pyrophosphate synthase - Arthrobacter
aurescens (strain TC1)
Length = 369
Score = 41.9 bits (94), Expect = 0.017
Identities = 19/65 (29%), Positives = 33/65 (50%)
Frame = +3
Query: 393 NLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSV 572
N++GGK R + + +Y + K H + A + +E+ ++ DD++DG V
Sbjct: 50 NVLGGKFVRPLLLMETYDALHKHGPAEPHQRETAISIAAAIELLHYAFLLHDDVIDGDLV 109
Query: 573 RRGMP 587
RRG P
Sbjct: 110 RRGHP 114
>UniRef50_Q9RVU0 Cluster: Polyprenyl synthase; n=4; Deinococci|Rep:
Polyprenyl synthase - Deinococcus radiodurans
Length = 320
Score = 40.3 bits (90), Expect = 0.050
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = +3
Query: 402 GGKHTRGITTVISYKTIEK-PEKV-TEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVR 575
GGK R + T+++ + + P+ + T H+ +L CVE+ + ++ DD++D S R
Sbjct: 32 GGKRVRPLVTLLAAQALGAGPDALATSHSWDELLRLSVCVELLHSASLLHDDLIDDSDKR 91
Query: 576 RGMPCWYRR 602
RG +RR
Sbjct: 92 RGQETAFRR 100
>UniRef50_P54383 Cluster: Geranyltranstransferase; n=27;
Bacteria|Rep: Geranyltranstransferase - Bacillus
subtilis
Length = 272
Score = 40.3 bits (90), Expect = 0.050
Identities = 39/140 (27%), Positives = 60/140 (42%), Gaps = 4/140 (2%)
Frame = +3
Query: 321 TLQNK-SKLSEVPQIGDWLKKMLHYNL-VGGKHTRGITTVISYKTIEKPEKVTEHTLKMA 494
T++N+ S +E + D LKK + Y+L GGK R + + K EK
Sbjct: 15 TIENQLSVYTEKLDMPDSLKKSMLYSLQAGGKRLRPLIVLAVLNAYGKSEKD-------G 67
Query: 495 CKLGWCVEMFQAYCIVLDDI--MDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEF 668
+G VEM Y ++ DD+ MD +RRG P ++ D LL S F+
Sbjct: 68 IPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEATAVLAGDGLLTES--FKL 125
Query: 669 LKTNFRTNPNYMKMFELFNE 728
+ ++ + K L NE
Sbjct: 126 ITSHVSDEVSAEKRLRLVNE 145
>UniRef50_Q3SAB7 Cluster: Geranylgeranyl pyrophosphate synthase;
n=1; uncultured euryarchaeote Alv-FOS1|Rep:
Geranylgeranyl pyrophosphate synthase - uncultured
euryarchaeote Alv-FOS1
Length = 352
Score = 39.9 bits (89), Expect = 0.067
Identities = 28/100 (28%), Positives = 51/100 (51%)
Frame = +3
Query: 282 KKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKP 461
K +D L E + K++++ P + + ++ + Y L GGK R + ++ Y+
Sbjct: 13 KSKIEDTLSEFFE--KKKTEVNH-PLLREAVEIIEEYTLRGGKRVRALLMILGYRMYGGK 69
Query: 462 EKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRG 581
+ + +K A L E+ Q+Y ++ DDIMD S +RRG
Sbjct: 70 D---DEIIKAAATL----ELVQSYFLIHDDIMDESDLRRG 102
>UniRef50_UPI0000DB7AE1 Cluster: PREDICTED: hypothetical protein;
n=1; Apis mellifera|Rep: PREDICTED: hypothetical protein
- Apis mellifera
Length = 423
Score = 39.5 bits (88), Expect = 0.088
Identities = 40/165 (24%), Positives = 79/165 (47%), Gaps = 14/165 (8%)
Frame = +3
Query: 222 YKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHY--- 392
++ + A++ ++ + + + E K+ +++ I +L+ K KLSE I KML
Sbjct: 160 FEFDDASILSSPEKTKQLEENKLLEEIPKATISSLEMKIKLSENDDISTVHSKMLEENKL 219
Query: 393 ----NLVGGKHTRGITTVISYKTIEKPEKVTEHTL-KMACKLGWCVEM--FQAYCIV--- 542
N+ T I +I+ +TIEK + TL K+ LG +E+ F CIV
Sbjct: 220 DMTPNITKSIETSDIDQIINDQTIEKSVETIYETLPKVTSPLGMKIELSNFVDACIVSSE 279
Query: 543 LDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSL-LIHSSLFEFLK 674
L + ++ + +++ +P E+ + ND+ ++HS + + K
Sbjct: 280 LQEELEENKLQQEIPKKTISMEMKSELSENDNTSIVHSEMIKETK 324
>UniRef50_A3HX57 Cluster: Putative isoprenoid biosynthesis related
protein; n=1; Algoriphagus sp. PR1|Rep: Putative
isoprenoid biosynthesis related protein - Algoriphagus
sp. PR1
Length = 328
Score = 39.5 bits (88), Expect = 0.088
Identities = 41/156 (26%), Positives = 78/156 (50%), Gaps = 3/156 (1%)
Frame = +3
Query: 273 INEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNL-VGGKHTRGITTVISYKT 449
+ EK LL ++ + +QN++ E P+ L + ++Y L +GGK R + ++++Y
Sbjct: 1 MTEKSHATALLDKLEVFIQNQN-FGESPKE---LYEPINYILNIGGKRIRPLLSLLAYGM 56
Query: 450 I-EKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCA 626
E P K+ L A +E+F + ++ DDIMD + +RRG + + + I
Sbjct: 57 YAENPGKI----LSQAS----AIEVFHNFTLMHDDIMDQAPLRRGNATVHEKWDANIAIL 108
Query: 627 FNDSLLIHSSLFEFLKTNFRTNPNYM-KMFELFNET 731
D +L+ + ++ L T P + ++ LFN+T
Sbjct: 109 SGDVMLVKA--YDLL---METEPALLPEIIRLFNKT 139
>UniRef50_Q97C41 Cluster: Farnesyl pyrophosphate synthase; n=3;
Thermoplasmatales|Rep: Farnesyl pyrophosphate synthase -
Thermoplasma volcanium
Length = 354
Score = 39.5 bits (88), Expect = 0.088
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +3
Query: 372 LKKMLHYNLVGGKHTRGITTVISYKTIEKPEK-VTEHTLKMACKLGWCVEMFQAYCIVLD 548
+K + Y GGK R I ++ Y+ EK + + ++ +E+ Q+Y ++ D
Sbjct: 43 IKIIRDYTEGGGKRLRPIFMILGYRLFSPEEKGIFDASIS--------IELAQSYLLIHD 94
Query: 549 DIMDGSSVRRGMPCWYRRPE 608
D++D S VRRG P + R E
Sbjct: 95 DVIDKSDVRRGKPSMHIRLE 114
>UniRef50_A2SRA1 Cluster: Polyprenyl synthetase; n=3;
Methanomicrobiales|Rep: Polyprenyl synthetase -
Methanocorpusculum labreanum (strain ATCC 43576 / DSM
4855 / Z)
Length = 322
Score = 39.5 bits (88), Expect = 0.088
Identities = 25/71 (35%), Positives = 35/71 (49%)
Frame = +3
Query: 375 KKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDI 554
K H + GGK R ++S ++I K +E + A L W + +V DDI
Sbjct: 31 KAASHLLVSGGKRLRPALVLLSAESIRKG--ASEDIFQAALALEWT----HTFTLVHDDI 84
Query: 555 MDGSSVRRGMP 587
MDG S+RRG P
Sbjct: 85 MDGDSLRRGRP 95
>UniRef50_A7BDF8 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 367
Score = 38.7 bits (86), Expect = 0.15
Identities = 24/67 (35%), Positives = 35/67 (52%)
Frame = +3
Query: 402 GGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRG 581
GGK R + + Y + V E +L L +E++QA +V DDI+D + RRG
Sbjct: 48 GGKRFRALMAHVGY-ALSSGTSVEEVSLP---HLSAALELYQASALVHDDIIDKADERRG 103
Query: 582 MPCWYRR 602
MP +RR
Sbjct: 104 MPTPHRR 110
>UniRef50_A3TKC8 Cluster: Putative polyprenyl synthase /
dimethylallyltranstransferase; n=1; Janibacter sp.
HTCC2649|Rep: Putative polyprenyl synthase /
dimethylallyltranstransferase - Janibacter sp. HTCC2649
Length = 366
Score = 38.7 bits (86), Expect = 0.15
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +3
Query: 498 KLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYR 599
+L +E FQA ++ DD+MD S RRGMP +R
Sbjct: 80 RLATAMEFFQAAALIHDDVMDDSDTRRGMPAAHR 113
>UniRef50_Q64BF4 Cluster: Bifunctional short chain isoprenyl
diphosphate synthase; n=1; uncultured archaeon
GZfos27B6|Rep: Bifunctional short chain isoprenyl
diphosphate synthase - uncultured archaeon GZfos27B6
Length = 360
Score = 38.7 bits (86), Expect = 0.15
Identities = 25/82 (30%), Positives = 40/82 (48%)
Frame = +3
Query: 483 LKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLF 662
+K A C+E F + + DDI D S +RRG P + + GI A N +++ +
Sbjct: 81 IKKALPTAICIEFFHNFSLAHDDIEDDSKLRRGEPALH--VKYGIPIAVNAGDGLYALSY 138
Query: 663 EFLKTNFRTNPNYMKMFELFNE 728
E LK N R + +++F E
Sbjct: 139 EALKAN-RNLLGLERAWKIFEE 159
>UniRef50_Q5KSN3 Cluster: Geranylgeranyl diphosphate synthase; n=1;
Streptomyces sp. KO-3988|Rep: Geranylgeranyl diphosphate
synthase - Streptomyces sp. KO-3988
Length = 388
Score = 38.3 bits (85), Expect = 0.20
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +3
Query: 513 VEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVG 614
+E+F A+ ++ DD+MD S RRG P +R E G
Sbjct: 118 LELFHAFTLIHDDVMDASDTRRGRPTLHRTLETG 151
>UniRef50_A0JV81 Cluster: Polyprenyl synthetase; n=2;
Actinomycetales|Rep: Polyprenyl synthetase -
Arthrobacter sp. (strain FB24)
Length = 364
Score = 38.3 bits (85), Expect = 0.20
Identities = 27/90 (30%), Positives = 41/90 (45%)
Frame = +3
Query: 333 KSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWC 512
+S +S + Q D L + + GGK R + ++ TE G
Sbjct: 30 QSVMSAISQDIDPLMGSISNLVTGGKRLRALMCYWGWRGAGGEAAATE-----VVTAGSA 84
Query: 513 VEMFQAYCIVLDDIMDGSSVRRGMPCWYRR 602
+E+FQA ++ DDI+D S RRG P +RR
Sbjct: 85 LELFQAAALIHDDIIDRSDTRRGGPSVHRR 114
>UniRef50_A5PJD2 Cluster: MGC152321 protein; n=6; Eutheria|Rep:
MGC152321 protein - Bos taurus (Bovine)
Length = 350
Score = 38.3 bits (85), Expect = 0.20
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Frame = +3
Query: 204 WPQLIRYKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQN-KSKLSEVPQIGDWLKK 380
W ++ K N++ ++S +L+ N K DLL + ++ +QN + +L E I D L++
Sbjct: 248 WEEMKPQKMNASGNLSSSSSLDRPNSKPSGADLLEKNLIEIQNLRQRLEESVFINDRLRE 307
Query: 381 MLHYNLVGGKHTRGITTVISYKTIEKPEKVTE 476
L Y L +G S ++ P TE
Sbjct: 308 RLEYVLSDAGQGKGAAQSASDVSLTTPHSYTE 339
>UniRef50_Q1V225 Cluster: Octaprenyl-diphosphate synthase; n=3;
Bacteria|Rep: Octaprenyl-diphosphate synthase -
Candidatus Pelagibacter ubique HTCC1002
Length = 337
Score = 37.5 bits (83), Expect = 0.36
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
Frame = +3
Query: 267 EIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNL-VGGKHTRGITTVISY 443
+I N D + E ++ ++ K K + + D ++KM Y++ GGK R + T+ S
Sbjct: 10 QINNSYYQLKDSVDEKLVLVEEKIKSKLLSDV-DLVQKMTEYHIDTGGKRLRALLTLGSA 68
Query: 444 KTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRG 581
K + + L CVEM ++ DD++D ++RRG
Sbjct: 69 KLCGYTKGGRD------INLAACVEMIHGATLMHDDVIDLGNIRRG 108
>UniRef50_Q0SF88 Cluster: Polyprenyl synthetase; n=17;
Actinomycetales|Rep: Polyprenyl synthetase - Rhodococcus
sp. (strain RHA1)
Length = 346
Score = 37.5 bits (83), Expect = 0.36
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
Frame = +3
Query: 342 LSEVPQIGDWLKKM-LHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVE 518
+SE+ D+L + LH GGK R + TV+ T + K ++ ++ A + VE
Sbjct: 45 VSELSDGEDFLTEAALHLAKAGGKRFRPLFTVL---TAQLGPKASDPSVVTAATV---VE 98
Query: 519 MFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSS 656
+ + DD+MD +S+RRG P R + D L H+S
Sbjct: 99 LVHLATLYHDDVMDEASMRRGAPSANSRWGNSVAILAGDYLFAHAS 144
>UniRef50_A6C8V0 Cluster: Polyprenyl synthetase; n=1; Planctomyces
maris DSM 8797|Rep: Polyprenyl synthetase - Planctomyces
maris DSM 8797
Length = 611
Score = 37.5 bits (83), Expect = 0.36
Identities = 27/123 (21%), Positives = 52/123 (42%), Gaps = 4/123 (3%)
Frame = +3
Query: 288 MFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEK 467
+F+D +++ L+ K++ + +G + GGK R T+ +Y + K ++
Sbjct: 259 LFEDNFDQILPPLRTKTEAAARTPLGKTEAISYDWLKHGGKRFRPFITLAAYDALIKAQQ 318
Query: 468 V---TEHTLKMAC-KLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFND 635
E T + K +E+F ++ DDI D R G +R+ G+ D
Sbjct: 319 ADDTAETTYPLGVQKAAMAIEVFHKASLIHDDIEDDDQYRYGRETLHRQHGTGMAINIGD 378
Query: 636 SLL 644
L+
Sbjct: 379 YLI 381
>UniRef50_Q5JWR5 Cluster: Protein dopey-1; n=25; Deuterostomia|Rep:
Protein dopey-1 - Homo sapiens (Human)
Length = 2465
Score = 37.5 bits (83), Expect = 0.36
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Frame = +3
Query: 219 RYKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQ---IGDWLKKMLH 389
+Y+N A + A KN E +E L ++ LQN +K VP+ IG L + LH
Sbjct: 13 KYRNYVAAIDKALKNFEYSSEWADLISALGKLNKVLQNNAKYQVVPKKLTIGKRLAQCLH 72
Query: 390 YNLVGGKHTRGITTV-ISYKTI 452
L GG H + + T I +K I
Sbjct: 73 PALPGGVHRKALETYEIIFKII 94
>UniRef50_Q8UBX7 Cluster: Geranyltranstransferase; n=4;
Rhizobium/Agrobacterium group|Rep:
Geranyltranstransferase - Agrobacterium tumefaciens
(strain C58 / ATCC 33970)
Length = 335
Score = 37.1 bits (82), Expect = 0.47
Identities = 29/109 (26%), Positives = 47/109 (43%), Gaps = 2/109 (1%)
Frame = +3
Query: 324 LQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKL 503
L +++ E+ + + L+ M H L GGK R + S + + H +
Sbjct: 58 LSGEARADEITRPQNLLEAMRHGVLNGGKRLRPFLVIESVALLGGDAEAGLH-------V 110
Query: 504 GWCVEMFQAYCIVLDDI--MDGSSVRRGMPCWYRRPEVGITCAFNDSLL 644
G +E Y +V DD+ MD +RRG P +R+ + DSLL
Sbjct: 111 GAALECLHCYSLVHDDLPAMDDDDLRRGQPTVHRKFDEATAILAGDSLL 159
>UniRef50_Q4AET3 Cluster: Farnesyltranstransferase; n=1; Chlorobium
phaeobacteroides BS1|Rep: Farnesyltranstransferase -
Chlorobium phaeobacteroides BS1
Length = 324
Score = 37.1 bits (82), Expect = 0.47
Identities = 29/119 (24%), Positives = 54/119 (45%)
Frame = +3
Query: 285 KMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPE 464
K +D L+ L+ ++ E ++ + + + Y GGK R + T+++ +
Sbjct: 2 KNYDQLISYFEKQLEKQNFAGEPKELYEPISYTISY---GGKRIRPVLTLMACELFCGD- 57
Query: 465 KVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSL 641
E L+ A +E+F + ++ DDIMD + +RRG YR+ I D+L
Sbjct: 58 --AEKALQQAI----AIELFHNFTLIHDDIMDNAPIRRGRETVYRKWNGNIAILSGDTL 110
>UniRef50_Q2I775 Cluster: PlaT4; n=1; Streptomyces sp. Tu6071|Rep:
PlaT4 - Streptomyces sp. Tu6071
Length = 359
Score = 37.1 bits (82), Expect = 0.47
Identities = 34/134 (25%), Positives = 52/134 (38%), Gaps = 3/134 (2%)
Frame = +3
Query: 267 EIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYK 446
EI +M +L + + ++ + G W L GK R TV++ +
Sbjct: 27 EIERVNRMVTPILHQAVTRFDDRLRPMVAHHFG-WPSSDLPTATTSGKMVRATLTVLTGE 85
Query: 447 TIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPC-WYRRPEVGITC 623
+ + G VEM + ++ DD+MDG RRG P W+ E GI
Sbjct: 86 CFTTDAEA----ISRVTAAGAAVEMIHNFSLIHDDVMDGDRERRGRPAVWH---EYGIPA 138
Query: 624 AF--NDSLLIHSSL 659
A D LL + L
Sbjct: 139 AILTGDLLLAQAPL 152
>UniRef50_Q9V077 Cluster: IdsA-like multifunctional short chain
isoprenyl diphosphate synthase; n=4;
Thermococcaceae|Rep: IdsA-like multifunctional short
chain isoprenyl diphosphate synthase - Pyrococcus abyssi
Length = 346
Score = 37.1 bits (82), Expect = 0.47
Identities = 31/93 (33%), Positives = 40/93 (43%)
Frame = +3
Query: 387 HYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGS 566
HY L GGK R + + E V + LK A +E+ Y +V DDIMD
Sbjct: 44 HYPLAGGKRIR------PFVVLTATEAVGGNALK-AIYPAVAIELIHNYSLVHDDIMDMD 96
Query: 567 SVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFE 665
RRG P ++ GI A L+ S FE
Sbjct: 97 ETRRGKPTVHK--VWGINMAILAGDLLFSKAFE 127
>UniRef50_Q9HQI3 Cluster: Geranylgeranyl diphosphate synthase; n=5;
Halobacteriaceae|Rep: Geranylgeranyl diphosphate
synthase - Halobacterium salinarium (Halobacterium
halobium)
Length = 347
Score = 37.1 bits (82), Expect = 0.47
Identities = 21/73 (28%), Positives = 37/73 (50%)
Frame = +3
Query: 453 EKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFN 632
E P+ + H M+ + +E+ Q++ ++ DDIMD +RRG P +R +
Sbjct: 75 EFPDCIGGHVDVMSAAVS--IEVIQSFTLIHDDIMDDDDLRRGSPAVHREYDTETAILAG 132
Query: 633 DSLLIHSSLFEFL 671
D+L +S FE +
Sbjct: 133 DTL--YSKAFEIM 143
>UniRef50_Q58270 Cluster: Bifunctional short chain isoprenyl
diphosphate synthase [Includes: Farnesyl pyrophosphate
synthetase (EC 2.5.1.1) (FPP synthetase)
(Dimethylallyltranstransferase); Geranyltranstransferase
(EC 2.5.1.10)]; n=6; Methanococcales|Rep: Bifunctional
short chain isoprenyl diphosphate synthase [Includes:
Farnesyl pyrophosphate synthetase (EC 2.5.1.1) (FPP
synthetase) (Dimethylallyltranstransferase);
Geranyltranstransferase (EC 2.5.1.10)] - Methanococcus
jannaschii
Length = 327
Score = 37.1 bits (82), Expect = 0.47
Identities = 24/67 (35%), Positives = 32/67 (47%)
Frame = +3
Query: 387 HYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGS 566
H GGK R TV++Y ++K + E L A VE+ Y ++ DDIMD
Sbjct: 41 HLLFAGGKRIRPYLTVVTYM-LKKDD--IEEVLPAAA----AVELIHNYTLIHDDIMDND 93
Query: 567 SVRRGMP 587
RRG P
Sbjct: 94 DERRGKP 100
>UniRef50_Q11XW6 Cluster: Geranyltranstransferase; n=3;
Sphingobacteriales|Rep: Geranyltranstransferase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 325
Score = 36.7 bits (81), Expect = 0.62
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 1/112 (0%)
Frame = +3
Query: 399 VGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRR 578
+GGK R + T++S + T + + A VE+F + ++ DDIMD + +RR
Sbjct: 38 LGGKRMRPLLTILSNYIFTED---TNNVMNAAI----AVEVFHNFTLMHDDIMDNAPLRR 90
Query: 579 GMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTNFRTNPNYMK-MFELFNET 731
G + + I D +L+ E K + Y+K + + FNET
Sbjct: 91 GKATVHAKWNTNIAILSGDVMLV-----EAYKQLMTIDEKYLKQVLDRFNET 137
>UniRef50_A0CU85 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 346
Score = 36.7 bits (81), Expect = 0.62
Identities = 41/163 (25%), Positives = 73/163 (44%), Gaps = 4/163 (2%)
Frame = +3
Query: 243 MTTASKNLEIINEKKMFDDLLPEVI-MTLQNKSKLSEVPQIGDWLKKMLHYNLV--GGKH 413
M ++++ K FD +LP+ ++ S+ +V + + + Y+L+ GGK
Sbjct: 1 MAQLKRDVKKFENSKSFDKILPKKFELSDPQFSQSDDVKTLSQSISDPI-YDLIDRGGKR 59
Query: 414 TRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCW 593
R + + ++ E ++A VE+ +V+DDI D SSVRR C
Sbjct: 60 WR---PAFCFLIADLFKRAHEELYEVAA----LVELIHNATLVVDDIEDDSSVRRNDKCV 112
Query: 594 YRRPEVGITCAFN-DSLLIHSSLFEFLKTNFRTNPNYMKMFEL 719
+ + G+ A N + L + L FL + +N MKM E+
Sbjct: 113 HIK--YGLDVAVNAANYLYFAPLHYFLNSANYSNDQKMKMLEV 153
>UniRef50_A7DRA7 Cluster: Polyprenyl synthetase; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Polyprenyl synthetase
- Candidatus Nitrosopumilus maritimus SCM1
Length = 283
Score = 36.7 bits (81), Expect = 0.62
Identities = 30/107 (28%), Positives = 51/107 (47%)
Frame = +3
Query: 258 KNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVI 437
KN+EI + + + + ++ L + L + + LK Y+L GGK R I +
Sbjct: 4 KNIEINPLLETYGEYIKKIDQALDKELDLYSESEFIEPLK----YSLEGGKRIRPIILTL 59
Query: 438 SYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRR 578
S ++I KV ++T +C VE I+ DDI+D ++RR
Sbjct: 60 SAESI---GKVDDNTFAASC----AVEFLHMESIIHDDIIDNETMRR 99
>UniRef50_A3CXK9 Cluster: Polyprenyl synthetase; n=1; Methanoculleus
marisnigri JR1|Rep: Polyprenyl synthetase -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 295
Score = 36.7 bits (81), Expect = 0.62
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +3
Query: 405 GKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGM 584
GK R + + + + T L +AC VE+ A ++LDD++DG + RRG+
Sbjct: 40 GKRMRAGLLLYIHAGLARTAAPTRQALDLAC----AVELAHAASLILDDMLDGDTARRGV 95
Query: 585 P 587
P
Sbjct: 96 P 96
>UniRef50_Q83N10 Cluster: Geranylgeranyl pyrophosphate synthase;
n=2; Tropheryma whipplei|Rep: Geranylgeranyl
pyrophosphate synthase - Tropheryma whipplei (strain
Twist) (Whipple's bacillus)
Length = 379
Score = 35.9 bits (79), Expect = 1.1
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = +3
Query: 468 VTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRR 602
+ E+ ++ + +E+F A +V DD++D S RRG+P ++R
Sbjct: 81 IPENLFELISDIAVAIELFHAAALVHDDLIDKSDSRRGLPAVHKR 125
>UniRef50_Q6AE53 Cluster: Geranylgeranyl pyrophosphate synthase;
n=3; Actinobacteria (class)|Rep: Geranylgeranyl
pyrophosphate synthase - Leifsonia xyli subsp. xyli
Length = 372
Score = 35.9 bits (79), Expect = 1.1
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Frame = +3
Query: 396 LVGGKHTRGITTVISYKTIEKP-EKVTEHT------LKMACKLGWCVEMFQAYCIVLDDI 554
L GGK R + ++ + E T+ T L + +E+F A +V DD+
Sbjct: 44 LSGGKRFRALFCFWGWQAVRTSGEDATDETVTAGGPLDAVVSVASALELFHAAALVHDDL 103
Query: 555 MDGSSVRRGMPCWYRRPE 608
+D S RRG P +RR E
Sbjct: 104 IDNSDTRRGAPSVHRRFE 121
>UniRef50_A5DBM0 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 428
Score = 35.9 bits (79), Expect = 1.1
Identities = 23/76 (30%), Positives = 36/76 (47%)
Frame = +3
Query: 168 CLKFTRKVTYKYWPQLIRYKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLS 347
CLK +K+T K WP +N S ++ TA N+E+ D +V N + L
Sbjct: 309 CLKVGQKITEKVWPGTQIIENQSKSLITAMINIEV-----PIDTFAKDVGSKGLNVTDLK 363
Query: 348 EVPQIGDWLKKMLHYN 395
EV + D ++ + YN
Sbjct: 364 EVKKCVDTIQYQMAYN 379
>UniRef50_A7IAG2 Cluster: Farnesyltranstransferase; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Farnesyltranstransferase -
Methanoregula boonei (strain 6A8)
Length = 325
Score = 35.9 bits (79), Expect = 1.1
Identities = 24/103 (23%), Positives = 47/103 (45%)
Frame = +3
Query: 363 GDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIV 542
G+ + H GGK R ++S + + + K +E+ + ++
Sbjct: 32 GELDRASAHLLSAGGKRLRPAVVMLS------ADAIRHGSSKDVMPAALALEVTHTFTLI 85
Query: 543 LDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFL 671
DDIMDG S+RRG+P + + ++ D ++++ FEF+
Sbjct: 86 HDDIMDGDSLRRGVPTVHTKWDMPTGILAGD--VLYARAFEFI 126
>UniRef50_Q9RUJ1 Cluster: Geranylgeranyl diphosphate synthase; n=2;
Deinococcus|Rep: Geranylgeranyl diphosphate synthase -
Deinococcus radiodurans
Length = 329
Score = 35.5 bits (78), Expect = 1.4
Identities = 34/125 (27%), Positives = 54/125 (43%)
Frame = +3
Query: 288 MFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEK 467
M +LL V+ L + S P++ + + Y GGK R + S + E
Sbjct: 1 MRPELLARVLSLLP---ETSATPELARFYALLRDYPQRGGKGIRSELLLASARAHGLSES 57
Query: 468 VTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLI 647
T + A L +E+FQ + +V DDI D S RRG P + G+ A N +
Sbjct: 58 DTGW--ESALWLAAALELFQNWVLVHDDIEDDSEERRGRPALHHL--CGMPVALNVGDAL 113
Query: 648 HSSLF 662
H+ ++
Sbjct: 114 HAYMW 118
>UniRef50_Q8G4G0 Cluster: Probably bifunctional short chain
isoprenyl diphosphate synthase [includes: farnesyl
pyrophosphate synthetase (Fpp synthetase)
(Dimethylallyltransferase); geranyltranstransferase ];
n=4; Bifidobacterium|Rep: Probably bifunctional short
chain isoprenyl diphosphate synthase [includes: farnesyl
pyrophosphate synthetase (Fpp synthetase)
(Dimethylallyltransferase); geranyltranstransferase ] -
Bifidobacterium longum
Length = 372
Score = 35.5 bits (78), Expect = 1.4
Identities = 25/101 (24%), Positives = 44/101 (43%), Gaps = 7/101 (6%)
Frame = +3
Query: 306 PEVIMTLQNKSKLSEVPQIGDWLKKMLHY-------NLVGGKHTRGITTVISYKTIEKPE 464
P +I ++ + ++ D LK ++ + GGK R + + ++ +
Sbjct: 25 PRIIQLVRELTAAPATDEVADALKPVMEQVVDQAASSSQGGKRLRALLALDAFDILAGD- 83
Query: 465 KVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMP 587
VT L +E+FQ +V DDI+D S +RRG P
Sbjct: 84 -VTPDRRDAMIDLACAIEVFQTAALVHDDIIDESDLRRGKP 123
>UniRef50_A1SLA1 Cluster: Polyprenyl synthetase; n=1; Nocardioides
sp. JS614|Rep: Polyprenyl synthetase - Nocardioides sp.
(strain BAA-499 / JS614)
Length = 358
Score = 35.5 bits (78), Expect = 1.4
Identities = 23/76 (30%), Positives = 35/76 (46%)
Frame = +3
Query: 372 LKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDD 551
L + H ++ GGK R ++ + + E L AC +E+ A +V DD
Sbjct: 42 LVREAHTSVSGGKRFRAAFCYWGHRAVAA-DVPDETALVRACA---SLELLHASALVHDD 97
Query: 552 IMDGSSVRRGMPCWYR 599
+MD S RRG P +R
Sbjct: 98 LMDASDTRRGHPATHR 113
>UniRef50_A3DLU2 Cluster: Polyprenyl synthetase; n=1;
Staphylothermus marinus F1|Rep: Polyprenyl synthetase -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 365
Score = 35.5 bits (78), Expect = 1.4
Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Frame = +3
Query: 390 YNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSS 569
Y L GGK R +I Y + K + L +E Q+Y +V DDIMD
Sbjct: 47 YTLRGGKRLRAFLVLIGYWS----RKWGYGNIDSIKYLMAGIEFLQSYLLVHDDIMDEDE 102
Query: 570 VRRGMP---CWYRR 602
+RRG P W+ R
Sbjct: 103 IRRGGPTVHVWFDR 116
>UniRef50_Q4SSX9 Cluster: Chromosome 8 SCAF14344, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 8
SCAF14344, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 2446
Score = 35.1 bits (77), Expect = 1.9
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Frame = +3
Query: 219 RYKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQ---IGDWLKKMLH 389
+Y+N A + A KN E +E L ++ LQN +K VP+ IG L + LH
Sbjct: 13 KYRNYVAAVDKALKNFEYSSEWADLISALGKLNKVLQNNAKYQVVPKKLTIGKRLAQCLH 72
Query: 390 YNLVGGKHTRGITTV-ISYKTI 452
L G H + + T I +K I
Sbjct: 73 PALPSGVHRKALETYEIIFKII 94
>UniRef50_O05708 Cluster: Octaprenyl-diphosphate synthase; n=1;
Treponema pallidum|Rep: Octaprenyl-diphosphate synthase
- Treponema pallidum
Length = 364
Score = 35.1 bits (77), Expect = 1.9
Identities = 18/40 (45%), Positives = 21/40 (52%)
Frame = +3
Query: 513 VEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFN 632
VE+ ++ DDI D SS RRG PC Y R G C N
Sbjct: 102 VELIHTASLLHDDIEDHSSTRRGKPCAYLR--YGTDCVLN 139
>UniRef50_Q54193 Cluster: Geranylgeranyl pyrophosphate synthase;
n=2; Streptomyces griseus|Rep: Geranylgeranyl
pyrophosphate synthase - Streptomyces griseus
Length = 425
Score = 35.1 bits (77), Expect = 1.9
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +3
Query: 492 ACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWY 596
A +LG +E+ Q+ ++ DD+MD S +RRG P +
Sbjct: 106 ALRLGVALELIQSCALIHDDVMDRSRLRRGKPAMH 140
>UniRef50_A2RHR5 Cluster: Prenyl transferase; n=3; Lactococcus
lactis|Rep: Prenyl transferase - Lactococcus lactis
subsp. cremoris (strain MG1363)
Length = 326
Score = 35.1 bits (77), Expect = 1.9
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = +3
Query: 402 GGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRG 581
GGK R ++ + K E +K+A L EM + ++ DDI+D S +RRG
Sbjct: 44 GGKMVRPALFLLFAGIVPNGSKDEEKLIKIAASL----EMLHSATLIHDDIIDDSPLRRG 99
Query: 582 MP 587
MP
Sbjct: 100 MP 101
>UniRef50_A1R5E5 Cluster: Putative polyprenyl synthetase; n=1;
Arthrobacter aurescens TC1|Rep: Putative polyprenyl
synthetase - Arthrobacter aurescens (strain TC1)
Length = 364
Score = 35.1 bits (77), Expect = 1.9
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +3
Query: 504 GWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRR 602
G +E+FQA ++ DDI+D S RRG P ++R
Sbjct: 82 GCALELFQAAALIHDDIIDRSDTRRGGPSVHKR 114
>UniRef50_A3GFK9 Cluster: Predicted protein; n=3;
Saccharomycetales|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 425
Score = 35.1 bits (77), Expect = 1.9
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Frame = -2
Query: 301 RSSNIFFSLIISRFFEAVVIFALLFLYLISCGQY--LYVTLRVNLRQLNTLMXT 146
RSS +F S ++S F A++ F +++ G+Y L +TL + R L+TL+ +
Sbjct: 85 RSSTLFISTLVSGFISAIITFPQFQNHILGYGRYYSLDLTLLLTTRALDTLVSS 138
>UniRef50_Q9RIY0 Cluster: Putative geranylgeranyl pyrophosphate
synthase; n=1; Streptomyces coelicolor|Rep: Putative
geranylgeranyl pyrophosphate synthase - Streptomyces
coelicolor
Length = 392
Score = 34.7 bits (76), Expect = 2.5
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +3
Query: 498 KLGWCVEMFQAYCIVLDDIMDGSSVRRGMP 587
+ G +E+ QA +V DD+MDGS RRG P
Sbjct: 103 RTGAALELLQACALVHDDVMDGSVQRRGAP 132
>UniRef50_Q3ACT5 Cluster: Heptaprenyl diphosphate synthase component
II; n=1; Carboxydothermus hydrogenoformans Z-2901|Rep:
Heptaprenyl diphosphate synthase component II -
Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 326
Score = 34.7 bits (76), Expect = 2.5
Identities = 26/104 (25%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
Frame = +3
Query: 279 EKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKK-MLHYNLVGGKHTRGITTVISYKTIE 455
EKK+F+ L+ E + ++ + + EV + ++L +H GGK R +++
Sbjct: 8 EKKLFE-LVKEDLRKIEQEL-IKEVSERNEFLHDPAMHLLKAGGKRLRPAFALLA----- 60
Query: 456 KPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMP 587
K+ ++ + L +E+ +V DD++D S +RRG+P
Sbjct: 61 --AKLGDYDFEKVKPLAVALELIHMATLVHDDVVDNSMLRRGLP 102
>UniRef50_Q26HU1 Cluster: Polyprenyl synthetase; n=14;
Bacteroidetes|Rep: Polyprenyl synthetase - Flavobacteria
bacterium BBFL7
Length = 327
Score = 34.7 bits (76), Expect = 2.5
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Frame = +3
Query: 384 LHYNL-VGGKHTRGITTVISYKTIE-KPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIM 557
+HY L +GGK R I T++S + K +K + + VE+F + ++ DDIM
Sbjct: 31 VHYILQLGGKRLRPILTLMSAQMYGGKIDKAMDAAI--------AVEVFHNFTLLHDDIM 82
Query: 558 DGSSVRRGMPCWYRRPEVGITCAFNDSLLI 647
D + +RRG + + +V D++LI
Sbjct: 83 DDADLRRGKETVHVKWDVNTGILSGDAMLI 112
>UniRef50_A7BUP3 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. PS|Rep: Putative uncharacterized protein -
Beggiatoa sp. PS
Length = 585
Score = 34.7 bits (76), Expect = 2.5
Identities = 28/111 (25%), Positives = 47/111 (42%), Gaps = 2/111 (1%)
Frame = +3
Query: 381 MLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMD 560
ML V H R I ++S +KP+K E TL +L C+ + A+C D++
Sbjct: 177 MLDEPNVSYNHFRQIVILLSASETQKPKKAKEETLTAIRQLYLCLWILYAWCREADNLES 236
Query: 561 G--SSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTNFRTNPNYMK 707
+S + W+ R + DS I + L N + N +Y++
Sbjct: 237 AFLASELTLLNAWFMRKPY-LKKKDKDSKAIQRTFNSILLLNKQINDDYLE 286
>UniRef50_A6LMQ9 Cluster: Polyprenyl synthetase; n=1; Thermosipho
melanesiensis BI429|Rep: Polyprenyl synthetase -
Thermosipho melanesiensis BI429
Length = 332
Score = 34.7 bits (76), Expect = 2.5
Identities = 21/76 (27%), Positives = 40/76 (52%)
Frame = +3
Query: 360 IGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCI 539
+G+ ++++ + L GK R + ++ + KV E K+A +E+ ++ +
Sbjct: 31 VGNLVEELKKFCLRPGKRIRPLLFILGVEGFGG--KVDETVYKIAAT----IEIMHSFLL 84
Query: 540 VLDDIMDGSSVRRGMP 587
+ DDIMD S +RRG P
Sbjct: 85 IHDDIMDQSELRRGQP 100
>UniRef50_Q9YB31 Cluster: Farnesylgeranyl diphosphate synthase; n=2;
Aeropyrum pernix|Rep: Farnesylgeranyl diphosphate
synthase - Aeropyrum pernix
Length = 332
Score = 34.7 bits (76), Expect = 2.5
Identities = 21/68 (30%), Positives = 32/68 (47%)
Frame = +3
Query: 384 LHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDG 563
LH GGK R + T+++ + + E A L +E + ++ DDIMD
Sbjct: 37 LHLIKAGGKRLRPLITLLTARMLGGLEAEAR-----AIPLAASIETAHTFSLIHDDIMDR 91
Query: 564 SSVRRGMP 587
VRRG+P
Sbjct: 92 DEVRRGVP 99
>UniRef50_Q9ZCE0 Cluster: Tyrosine recombinase xerC; n=10;
Rickettsia|Rep: Tyrosine recombinase xerC - Rickettsia
prowazekii
Length = 305
Score = 34.7 bits (76), Expect = 2.5
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Frame = +3
Query: 198 KYWPQLIRYKNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLK 377
K W + + + N +N T + N ++ + + + E++ TL N K +++ I WL
Sbjct: 11 KQWQKYLILQKNYSNNTVIAYNNDLKHFLEFMNYYNSELV-TL-NHIKTADIRLIRSWLA 68
Query: 378 KMLHYNLVGGKHTRGITTVIS-YKTIEKPEKVTEHTL 485
K N RG++TV + YK +EK + H +
Sbjct: 69 KRKCENFTASSIARGLSTVKNFYKFLEKTLLLNNHII 105
>UniRef50_Q8NNM1 Cluster: Geranylgeranyl pyrophosphate synthase;
n=4; Corynebacterium|Rep: Geranylgeranyl pyrophosphate
synthase - Corynebacterium glutamicum (Brevibacterium
flavum)
Length = 371
Score = 34.3 bits (75), Expect = 3.3
Identities = 22/83 (26%), Positives = 37/83 (44%)
Frame = +3
Query: 360 IGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCI 539
+ D + + + L GGK R + + + + +E L+ +E QA +
Sbjct: 45 VTDAVAHLRSFVLNGGKRIRPLYAWAGFLAAQGHKNSSEK-LESVLDAAASLEFIQACAL 103
Query: 540 VLDDIMDGSSVRRGMPCWYRRPE 608
+ DDI+D S RRG P +R E
Sbjct: 104 IHDDIIDSSDTRRGAPTVHRAVE 126
>UniRef50_Q82P04 Cluster: Putative polyprenyl diphosphate synthase;
n=2; Streptomyces|Rep: Putative polyprenyl diphosphate
synthase - Streptomyces avermitilis
Length = 344
Score = 34.3 bits (75), Expect = 3.3
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 513 VEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSL 641
VE+ + ++ DDIMDG ++RRG P ++ G D+L
Sbjct: 92 VELVHTFSLLHDDIMDGDAMRRGRPALWKAYGTGPAVLAGDAL 134
>UniRef50_Q5YXP1 Cluster: Polyprenyl synthase; n=1; Nocardia
farcinica|Rep: Polyprenyl synthase - Nocardia farcinica
Length = 385
Score = 34.3 bits (75), Expect = 3.3
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +3
Query: 387 HYNLVGGKHTRGITTVISYKTIEKPEKVTEH-TLKMACKLGWCVEMFQAYCIVLDDIMDG 563
H GK R + + I P+ H L +AC W EMF +V DDI DG
Sbjct: 95 HILTAPGKRVRAGLALACAQLIPSPDAAPVHDALDIACV--W--EMFHESSLVHDDICDG 150
Query: 564 SSVRRGMP 587
S +RR P
Sbjct: 151 SPLRRDAP 158
>UniRef50_Q2JD77 Cluster: Polyprenyl synthetase; n=2; Frankia|Rep:
Polyprenyl synthetase - Frankia sp. (strain CcI3)
Length = 634
Score = 34.3 bits (75), Expect = 3.3
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 513 VEMFQAYCIVLDDIMDGSSVRRGMPCWYRR 602
+E+ A ++ DD+MD S RRG P +RR
Sbjct: 322 IELLHACALIHDDVMDASDTRRGRPAAHRR 351
>UniRef50_Q4W8B2 Cluster: GGPP synthase; n=2; Brevundimonas|Rep:
GGPP synthase - Brevundimonas sp. SD212
Length = 298
Score = 34.3 bits (75), Expect = 3.3
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +3
Query: 492 ACKLGWCVEMFQAYCIVLDDI--MDGSSVRRGMPCWYRR 602
A G VEM A +VLDD+ MD +++RRG P +RR
Sbjct: 75 ALDFGCAVEMAHAASLVLDDLPCMDDAALRRGQPTLHRR 113
>UniRef50_A7HJU8 Cluster: Polyprenyl synthetase; n=1;
Fervidobacterium nodosum Rt17-B1|Rep: Polyprenyl
synthetase - Fervidobacterium nodosum Rt17-B1
Length = 341
Score = 34.3 bits (75), Expect = 3.3
Identities = 24/102 (23%), Positives = 47/102 (46%)
Frame = +3
Query: 303 LPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHT 482
+ E I TL + K + + ++ + L GK R + ++SY + K +
Sbjct: 10 IDEKIETLCEELKKIAPENLKELIENFNEFTLRPGKRVRPLLLLLSYNGYKG--KNMDDA 67
Query: 483 LKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPE 608
+ A +E+ ++ +V DDI+D + +RRG P ++ E
Sbjct: 68 ITFAA----AIEIMHSFLLVHDDIIDNADLRRGKPTLHKTYE 105
>UniRef50_A4EBW4 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 341
Score = 34.3 bits (75), Expect = 3.3
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +3
Query: 513 VEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLL 644
+E FQ+ ++ DDI D +RRG PC + G+ D L
Sbjct: 82 IEHFQSGALIHDDIADNGQLRRGKPCMHLTEGTGLAINCGDLAL 125
>UniRef50_A0CE39 Cluster: Chromosome undetermined scaffold_17, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_17,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 366
Score = 34.3 bits (75), Expect = 3.3
Identities = 23/71 (32%), Positives = 32/71 (45%)
Frame = +3
Query: 375 KKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDI 554
K HY GK R + ++ IEK + TE A +E+ +V DDI
Sbjct: 71 KASTHYFSKEGKLIRPMLNLLYANHIEKNSQHTEQQRIWAA----VIEILHVASLVHDDI 126
Query: 555 MDGSSVRRGMP 587
+D S RRG+P
Sbjct: 127 LDASDTRRGIP 137
>UniRef50_UPI0001509DE7 Cluster: hypothetical protein TTHERM_00285490;
n=1; Tetrahymena thermophila SB210|Rep: hypothetical
protein TTHERM_00285490 - Tetrahymena thermophila SB210
Length = 1629
Score = 33.9 bits (74), Expect = 4.4
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Frame = +3
Query: 225 KNNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVG 404
+ N A T+ + + N K + D +LP+V + KSK+ + Q+ D+ + N
Sbjct: 883 EENKATTTSTTSYAKTQNIKSINDIILPKVKAPPKLKSKIKKTSQVSDFQMDDFNVNNSQ 942
Query: 405 GKHTRGI-TTVISYKTIE--KPEKVTEHTL 485
+ + I + V+ Y+ IE K ++ TEH +
Sbjct: 943 KRKNQQIQSEVLKYEYIEIVKQKRETEHLM 972
>UniRef50_A5P6P0 Cluster: Polyprenyl synthetase; n=1; Erythrobacter
sp. SD-21|Rep: Polyprenyl synthetase - Erythrobacter sp.
SD-21
Length = 350
Score = 33.5 bits (73), Expect = 5.8
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +3
Query: 483 LKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLL 644
L A + VE+ ++ DD+ D S +RRG+P + + V + D+LL
Sbjct: 75 LTQAARCAAAVELLHNALLIHDDVQDESDLRRGLPTLHAQHGVALAINAGDALL 128
>UniRef50_A3JEZ4 Cluster: Putative polyprenyl diphosphate synthase;
n=1; Marinobacter sp. ELB17|Rep: Putative polyprenyl
diphosphate synthase - Marinobacter sp. ELB17
Length = 344
Score = 33.5 bits (73), Expect = 5.8
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +3
Query: 510 CVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLL 644
C E+ +V DD++DG +RRG ++R G+ D LL
Sbjct: 94 CCELIHNASLVHDDLLDGDQLRRGQATVWKRHGRGVALCAGDLLL 138
>UniRef50_Q0UDQ3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 415
Score = 33.5 bits (73), Expect = 5.8
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +3
Query: 459 PEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMP 587
PE++ H AC+LGW +++DD+ D S +RRG+P
Sbjct: 158 PERIGSHN---ACQLGW----LHTASLLVDDVEDSSLLRRGIP 193
>UniRef50_A1RWE7 Cluster: Polyprenyl synthetase; n=1; Thermofilum
pendens Hrk 5|Rep: Polyprenyl synthetase - Thermofilum
pendens (strain Hrk 5)
Length = 302
Score = 33.5 bits (73), Expect = 5.8
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +3
Query: 390 YNLVGGKHTRG-ITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGS 566
Y L GGK RG ++ +++ + EKV L VE+ A +V DDI D S
Sbjct: 39 YALFGGKMLRGTLSLLVASMFTAQVEKVLPIAL--------AVELMHAASLVHDDIADAS 90
Query: 567 SVRRGMPCWYRR 602
RRG P ++ +
Sbjct: 91 PTRRGRPSFWSK 102
>UniRef50_O14207 Cluster: Uncharacterized protein C6B12.02c; n=1;
Schizosaccharomyces pombe|Rep: Uncharacterized protein
C6B12.02c - Schizosaccharomyces pombe (Fission yeast)
Length = 1888
Score = 33.5 bits (73), Expect = 5.8
Identities = 22/66 (33%), Positives = 34/66 (51%)
Frame = +3
Query: 228 NNSANMTTASKNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGG 407
N S+N T + NL+ + KK +LP +TLQ K KL G K LH +++ G
Sbjct: 254 NISSNSTVSDLNLKTL--KKRLRGVLPPSFLTLQEKKKLE---NRGVKKKTSLHKSVIEG 308
Query: 408 KHTRGI 425
+ +G+
Sbjct: 309 EKIKGV 314
>UniRef50_P31171 Cluster: Prenyl transferase; n=8; cellular
organisms|Rep: Prenyl transferase - Cyanophora paradoxa
Length = 323
Score = 33.5 bits (73), Expect = 5.8
Identities = 28/93 (30%), Positives = 38/93 (40%), Gaps = 1/93 (1%)
Frame = +3
Query: 387 HYNLVGGKHTR-GITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDG 563
H GK R I +IS T+E + H +L E+ +V DDI+D
Sbjct: 39 HLFSASGKRPRPAIVLLISKATMENEIITSRHR-----RLAEITEIIHTASLVHDDILDE 93
Query: 564 SSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLF 662
S VRRG+P + I D L SS +
Sbjct: 94 SDVRRGIPTVHSDFGTKIAILAGDFLFAQSSWY 126
>UniRef50_P95999 Cluster: Geranylgeranyl pyrophosphate synthetase
(GGPP synthetase) (GGPS) [Includes:
Dimethylallyltranstransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10);
Farnesyltranstransferase (EC 2.5.1.29)]; n=5;
Sulfolobaceae|Rep: Geranylgeranyl pyrophosphate
synthetase (GGPP synthetase) (GGPS) [Includes:
Dimethylallyltranstransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10);
Farnesyltranstransferase (EC 2.5.1.29)] - Sulfolobus
solfataricus
Length = 332
Score = 33.5 bits (73), Expect = 5.8
Identities = 31/114 (27%), Positives = 45/114 (39%), Gaps = 2/114 (1%)
Frame = +3
Query: 387 HYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGS 566
H GGK R + V S I + A K VE+ + +V DDIMD
Sbjct: 38 HLFTAGGKRLRPLVLVSSSDLIGGDRE-------RAYKAAAAVEILHNFTLVHDDIMDND 90
Query: 567 SVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTNFR--TNPNYMKMFELF 722
+RRG+P + + + D L H+ FE L + + K F +F
Sbjct: 91 GLRRGLPTVHVKWGEPMAILAGDYL--HAKAFEALNEALKGLDGNTFYKAFSIF 142
>UniRef50_UPI00015B5668 Cluster: PREDICTED: similar to
dipeptidyl-peptidase; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to dipeptidyl-peptidase - Nasonia
vitripennis
Length = 878
Score = 33.1 bits (72), Expect = 7.7
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = -3
Query: 543 AQCNMPETFRHTIPVYKPFSKYVR*LFPVFQLFCMKSQ*LFLLYVYRQPNCNEASFSTNP 364
A+ + P R T+PV F V+ L P K++ LLYVY P+ NE + N
Sbjct: 613 AEKSRPTVKRFTVPVPGGFEAQVKLLLPPNADLSGKTKYPMLLYVYGGPDTNEVTEKFNI 672
Query: 363 LFGALQIT 340
+G +T
Sbjct: 673 DWGTYLVT 680
>UniRef50_Q2RM43 Cluster: Polyprenyl synthetase; n=1; Moorella
thermoacetica ATCC 39073|Rep: Polyprenyl synthetase -
Moorella thermoacetica (strain ATCC 39073)
Length = 320
Score = 33.1 bits (72), Expect = 7.7
Identities = 22/76 (28%), Positives = 36/76 (47%)
Frame = +3
Query: 372 LKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDD 551
L+++L Y L GGK R + + + A ++ +E+ +V DD
Sbjct: 21 LQELLDYALEGGKGLRPTLVFLC-------ARFGIYDALEAGRVAAAIELVHLASLVHDD 73
Query: 552 IMDGSSVRRGMPCWYR 599
I+DG++VRR P YR
Sbjct: 74 ILDGAAVRRNRPALYR 89
>UniRef50_Q9S5E9 Cluster: SelF-HepPS; n=1; Synechococcus
elongatus|Rep: SelF-HepPS - Synechococcus elongatus
(Thermosynechococcus elongatus)
Length = 324
Score = 33.1 bits (72), Expect = 7.7
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 492 ACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYR 599
A + VE+ + ++ DDIMD S +RRG P YR
Sbjct: 60 AAPVAAAVEILHNFTLIHDDIMDRSPLRRGRPTVYR 95
>UniRef50_Q0C4D6 Cluster: Polyprenyl synthetase; n=4;
Alphaproteobacteria|Rep: Polyprenyl synthetase -
Hyphomonas neptunium (strain ATCC 15444)
Length = 337
Score = 33.1 bits (72), Expect = 7.7
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Frame = +3
Query: 294 DDLLP-EVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKV 470
DDL E ++ + S ++ +P + ++ GGK R + T+I+ + K
Sbjct: 26 DDLAAVERLLATRAASPVAVIPDLSGYIVS------AGGKRLRPMITLIAAHAVGKANAA 79
Query: 471 TEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMP 587
T H L A VE ++ DD++D S +RRG P
Sbjct: 80 T-HALAAA------VEFIHTATLLHDDVVDESDLRRGKP 111
>UniRef50_Q2UV12 Cluster: Geranylgeranyl pyrophosphate
synthase/Polyprenyl synthetase; n=1; Aspergillus
oryzae|Rep: Geranylgeranyl pyrophosphate
synthase/Polyprenyl synthetase - Aspergillus oryzae
Length = 358
Score = 33.1 bits (72), Expect = 7.7
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +3
Query: 519 MFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTNFR 686
M Q ++LDDI DGS +RRG P + G++ N + I + + ++T+ R
Sbjct: 108 MLQNSSLMLDDIEDGSQLRRGAPA--AHVKYGLSQTINSTTYIIAKVVSEVQTHLR 161
>UniRef50_Q8ZXZ8 Cluster: Polyprenyl synthetase; n=6;
Thermoproteales|Rep: Polyprenyl synthetase - Pyrobaculum
aerophilum
Length = 334
Score = 33.1 bits (72), Expect = 7.7
Identities = 21/74 (28%), Positives = 34/74 (45%)
Frame = +3
Query: 366 DWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVL 545
D+ +++ GGK R + T+ + + I K A VE+ Y ++
Sbjct: 30 DFRDAVMYQVKTGGKRLRPLLTLATAEAISGQ-------WKPALPAAAIVELIHNYSLIY 82
Query: 546 DDIMDGSSVRRGMP 587
DDI+D +RRGMP
Sbjct: 83 DDIIDRGDLRRGMP 96
>UniRef50_Q9VR91 Cluster: Probable E3 ubiquitin-protein ligase HERC2;
n=3; Drosophila melanogaster|Rep: Probable E3
ubiquitin-protein ligase HERC2 - Drosophila melanogaster
(Fruit fly)
Length = 4912
Score = 33.1 bits (72), Expect = 7.7
Identities = 17/65 (26%), Positives = 34/65 (52%)
Frame = -2
Query: 697 LGLVLKLVFRNSNKELCIKRESLKAHVMPTSGRRYQQGMPRRTLEPSIMSSSTMQYA*NI 518
+G ++++ F EL +K+ SL+A +MPT + Q + + + + T+ A +
Sbjct: 2517 IGQIMEMGFTRRTVELALKQLSLQAEIMPTPEQIVQWILEHPDVCANTIEEDTLPLASSA 2576
Query: 517 STHHP 503
S+H P
Sbjct: 2577 SSHDP 2581
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 751,402,716
Number of Sequences: 1657284
Number of extensions: 15431074
Number of successful extensions: 41003
Number of sequences better than 10.0: 115
Number of HSP's better than 10.0 without gapping: 39504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40954
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62969581935
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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