Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_E12
(758 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81106-1|CAB03221.2| 352|Caenorhabditis elegans Hypothetical pr... 73 3e-13
Z70753-8|CAA94763.1| 137|Caenorhabditis elegans Hypothetical pr... 30 2.1
CU457740-9|CAM36339.1| 357|Caenorhabditis elegans Hypothetical ... 29 4.7
AY874872-1|AAX62733.1| 1668|Caenorhabditis elegans chitin syntha... 29 4.7
AL132952-5|CAB61137.1| 498|Caenorhabditis elegans Hypothetical ... 29 4.7
AF026210-2|AAB71283.2| 1668|Caenorhabditis elegans Chitin syntha... 29 4.7
AC024751-13|AAK21512.2| 488|Caenorhabditis elegans Hypothetical... 29 4.7
U80443-7|AAB37678.2| 393|Caenorhabditis elegans Coenzyme q (ubi... 28 8.3
>Z81106-1|CAB03221.2| 352|Caenorhabditis elegans Hypothetical
protein R06C1.2 protein.
Length = 352
Score = 72.5 bits (170), Expect = 3e-13
Identities = 33/123 (26%), Positives = 68/123 (55%)
Frame = +3
Query: 375 KKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDI 554
+ + ++GGK++R V + + ++ + L+ C+ +E+ Q++ ++ DDI
Sbjct: 42 RNLFDNTVIGGKYSRASLCVDTIRALQPHLRDETQELQAVCEAAATLEIIQSFYLIADDI 101
Query: 555 MDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTNFRTNPNYMKMFELFNETX 734
MD S RRG PCW+RR VG++ A ND+ ++ S + + L+ + N ++ E + ++
Sbjct: 102 MDNSETRRGKPCWFRREGVGMS-AINDAFIMDSFVEDILRLALPGHVNLDRLCEAYRKSK 160
Query: 735 WRT 743
+T
Sbjct: 161 QKT 163
>Z70753-8|CAA94763.1| 137|Caenorhabditis elegans Hypothetical
protein F40F9.8 protein.
Length = 137
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 276 NEKKMFDDLLPEVIMTLQNKSKLSEVPQ 359
N + FDDLLP V++ +QN+ + P+
Sbjct: 42 NGRVSFDDLLPRVVLAIQNEEWKDDTPK 69
>CU457740-9|CAM36339.1| 357|Caenorhabditis elegans Hypothetical
protein C50E10.9 protein.
Length = 357
Score = 28.7 bits (61), Expect = 4.7
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Frame = -3
Query: 543 AQCNMPETFRHTIPVYKPFSKYVR*LFPVFQLFCMKSQ*LFLLYVYRQPNCNEASFST-- 370
A+ N E F + + +S + L +F + C K L LY++R+ N S ++
Sbjct: 275 AESNYWEVFGYILDFVVSYSNCIIVLIVIFSVPCWKKSFLRPLYMFRRMQSNRVSMASQE 334
Query: 369 -NPLFGALQITWICF 328
+P A QI+ I F
Sbjct: 335 KDPEEDARQISSIYF 349
>AY874872-1|AAX62733.1| 1668|Caenorhabditis elegans chitin synthase 2
protein.
Length = 1668
Score = 28.7 bits (61), Expect = 4.7
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 7/77 (9%)
Frame = +3
Query: 345 SEVPQIGDWLKKMLHYNLVGGK-HTRGITTVISYKTIEKP-----EKVTEHTLK-MACKL 503
S V + D +KK G+ H RG ++ Y+ E +K TEH + + C
Sbjct: 874 SSVYLLVDLMKKNRRLGAACGRIHPRGDGAMVWYQKFEYAIGHWLQKATEHMIGCVMCSP 933
Query: 504 GWCVEMFQAYCIVLDDI 554
G C +F+AY ++ D++
Sbjct: 934 G-CFSLFRAYALMDDNV 949
>AL132952-5|CAB61137.1| 498|Caenorhabditis elegans Hypothetical
protein Y51H4A.5 protein.
Length = 498
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = -2
Query: 343 NLDLFCSVIITSGRRSSNIFFSLIISRFFEAVVIFALLF 227
NL+LF + T RS+ IFF+ + F +++F L+F
Sbjct: 141 NLELFFACFNTCIFRSNRIFFNSAANLNFATILVFFLIF 179
>AF026210-2|AAB71283.2| 1668|Caenorhabditis elegans Chitin synthase
protein 2 protein.
Length = 1668
Score = 28.7 bits (61), Expect = 4.7
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 7/77 (9%)
Frame = +3
Query: 345 SEVPQIGDWLKKMLHYNLVGGK-HTRGITTVISYKTIEKP-----EKVTEHTLK-MACKL 503
S V + D +KK G+ H RG ++ Y+ E +K TEH + + C
Sbjct: 874 SSVYLLVDLMKKNRRLGAACGRIHPRGDGAMVWYQKFEYAIGHWLQKATEHMIGCVMCSP 933
Query: 504 GWCVEMFQAYCIVLDDI 554
G C +F+AY ++ D++
Sbjct: 934 G-CFSLFRAYALMDDNV 949
>AC024751-13|AAK21512.2| 488|Caenorhabditis elegans Hypothetical
protein Y18H1A.9 protein.
Length = 488
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/67 (20%), Positives = 30/67 (44%)
Frame = +3
Query: 273 INEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTI 452
I M DD+ ++ + + KL + ++ DW ++ + +NL + ++ I
Sbjct: 81 IKHSVMIDDVQKVIVEQKEKRDKLRKQVRLHDWREQKVQFNLAQYHSFADVINYLNSLAI 140
Query: 453 EKPEKVT 473
PE V+
Sbjct: 141 TYPELVS 147
>U80443-7|AAB37678.2| 393|Caenorhabditis elegans Coenzyme q
(ubiquinone) biosynthesisprotein 1 protein.
Length = 393
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 498 KLGWCVEMFQAYCIVLDDIMDGSSVRRG 581
K+G EM +V DD++D ++ RRG
Sbjct: 137 KIGMIAEMIHTASLVHDDVIDEANTRRG 164
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,495,519
Number of Sequences: 27780
Number of extensions: 382300
Number of successful extensions: 1054
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1054
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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