Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_E11
         (743 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    23   2.0  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    23   2.0  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   2.6  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    23   2.6  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    23   2.6  
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    23   3.4  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        22   6.0  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   7.9  

>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 17  PEMVSPTPYPSTKVTLCPTPSSVWT 91
           P  +SP  +P+T   +   P+SV T
Sbjct: 447 PNYISPEVFPNTNNAIMTPPASVQT 471


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 17  PEMVSPTPYPSTKVTLCPTPSSVWT 91
           P  +SP  +P+T   +   P+SV T
Sbjct: 395 PNYISPEVFPNTNNAIMTPPASVQT 419


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 459 YHHVPRYRRQDAEGDHRPR 515
           Y H+ RY+ +  +GD R R
Sbjct: 159 YQHLHRYKEEALQGDGRMR 177


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 459 YHHVPRYRRQDAEGDHRPR 515
           Y H+ RY+ +  +GD R R
Sbjct: 159 YQHLHRYKEEALQGDGRMR 177


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 459 YHHVPRYRRQDAEGDHRPR 515
           Y H+ RY+ +  +GD R R
Sbjct: 159 YQHLHRYKEEALQGDGRMR 177


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 409 DVDIRKDLYANTVMSGGTTMYPGI 480
           D D+ KD     V+ GG+T  P I
Sbjct: 150 DADMTKDQIDEIVLVGGSTRIPKI 173


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +3

Query: 6   RARLRRWCLPHRTHLRRLRSAPRHPPSGLG 95
           RARLR+      T L R  +  R+PP   G
Sbjct: 272 RARLRKQITSAATPLVRSYAPERYPPLAQG 301


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +1

Query: 235 ATAAASTSLEKSYELP 282
           A AAAS S++ SY++P
Sbjct: 178 AVAAASGSVDISYDVP 193


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,127
Number of Sequences: 336
Number of extensions: 3401
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)