Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_E11
(743 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 452 e-127
SB_56| Best HMM Match : Actin (HMM E-Value=0) 452 e-127
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 452 e-127
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 451 e-127
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 450 e-127
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 364 e-101
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 257 8e-69
SB_54| Best HMM Match : Actin (HMM E-Value=0) 207 6e-54
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 206 2e-53
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 155 5e-38
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 95 4e-20
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 92 4e-19
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 86 3e-17
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 68 9e-12
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.32
SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054) 32 0.56
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 30 1.7
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 29 4.0
SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 29 5.3
SB_7681| Best HMM Match : Annexin (HMM E-Value=0) 29 5.3
SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_24438| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 28 7.0
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_10094| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_4199| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 28 9.2
SB_45720| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85) 28 9.2
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 452 bits (1115), Expect = e-127
Identities = 211/226 (93%), Positives = 221/226 (97%)
Frame = +1
Query: 1 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 180
GIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIV
Sbjct: 113 GIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 172
Query: 181 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 360
RDIKEKLCYVALDFEQEM TAA+S+SLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGM
Sbjct: 173 RDIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGM 232
Query: 361 ESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 540
ES GIHET YNSIMKCDVDIRKDLYANTV+SGGTTMYPGIADRMQKEI+ALAP T+KIKI
Sbjct: 233 ESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEISALAPPTMKIKI 292
Query: 541 IAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 678
IAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 293 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPAIVHRKCF 338
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 452 bits (1114), Expect = e-127
Identities = 211/226 (93%), Positives = 221/226 (97%)
Frame = +1
Query: 1 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 180
GIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV
Sbjct: 150 GIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 209
Query: 181 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 360
RDIKEKLCYVALDFEQEM TAA+S+SLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGM
Sbjct: 210 RDIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGM 269
Query: 361 ESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 540
ES GIHET YNSIMKCDVDIRKDLYANTV+SGG+TMYPGIADRMQKEIT+LAP T+KIKI
Sbjct: 270 ESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKI 329
Query: 541 IAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 678
IAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 330 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 452 bits (1114), Expect = e-127
Identities = 211/226 (93%), Positives = 221/226 (97%)
Frame = +1
Query: 1 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 180
GIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV
Sbjct: 151 GIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 210
Query: 181 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 360
RDIKEKLCYVALDFEQEM TAA+S+SLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGM
Sbjct: 211 RDIKEKLCYVALDFEQEMTTAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGM 270
Query: 361 ESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 540
ES GIHET YNSIMKCDVDIRKDLYANTV+SGG+TMYPGIADRMQKEI+ALAP T+KIKI
Sbjct: 271 ESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEISALAPPTMKIKI 330
Query: 541 IAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 678
IAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 331 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 451 bits (1112), Expect = e-127
Identities = 210/226 (92%), Positives = 221/226 (97%)
Frame = +1
Query: 1 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 180
GIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIV
Sbjct: 151 GIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 210
Query: 181 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 360
RDIKEKLCYVALDFEQEM TAA+S+SLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGM
Sbjct: 211 RDIKEKLCYVALDFEQEMETAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGM 270
Query: 361 ESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 540
ES GIHET YNSIMKCDVDIRKDLYANTV+SGG+TMYPGIADRMQKEIT+LAP T+KIKI
Sbjct: 271 ESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKI 330
Query: 541 IAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 678
IAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 331 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 450 bits (1108), Expect = e-127
Identities = 211/226 (93%), Positives = 221/226 (97%)
Frame = +1
Query: 1 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 180
GIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV
Sbjct: 150 GIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 209
Query: 181 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 360
RDIKEKL YVALDFEQEMATAAAS+SLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGM
Sbjct: 210 RDIKEKLAYVALDFEQEMATAAASSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGM 269
Query: 361 ESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 540
ES GIHET YNSIMKCDVDIRKDLYANTV+SGG+TM+PGIADRMQKEI+ALAP T+KIKI
Sbjct: 270 ESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEISALAPPTMKIKI 329
Query: 541 IAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 678
IAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 330 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 364 bits (895), Expect = e-101
Identities = 171/192 (89%), Positives = 180/192 (93%)
Frame = +1
Query: 103 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELP 282
D + + I ERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAA+S+S+EKSYELP
Sbjct: 158 DGVSHTVPIYEERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSIEKSYELP 217
Query: 283 DGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGT 462
DGQVITIGNERFRCPEAL QPSFLGMES GIHET YNSIMKCDVDIRKDLYANTVMSGGT
Sbjct: 218 DGQVITIGNERFRCPEALLQPSFLGMESSGIHETTYNSIMKCDVDIRKDLYANTVMSGGT 277
Query: 463 TMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYD 642
TMYPG+ADRMQKEI+ALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYD
Sbjct: 278 TMYPGLADRMQKEISALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYD 337
Query: 643 ESGPGIVHRKCF 678
ESGP IVHRKCF
Sbjct: 338 ESGPAIVHRKCF 349
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 257 bits (629), Expect = 8e-69
Identities = 116/145 (80%), Positives = 132/145 (91%)
Frame = +1
Query: 244 AASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIR 423
A S LEK+YELPDGQVI+IGNERFRCPEA+FQP+FLGME+ GIHE +YN IMKCDVDIR
Sbjct: 5 ANSPILEKTYELPDGQVISIGNERFRCPEAMFQPAFLGMEAPGIHEAIYNCIMKCDVDIR 64
Query: 424 KDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLS 603
KDLY+N V+SGG+TM+PGIADRMQKEI LA +++K+K+IAPPERKYSVWIGGSILASLS
Sbjct: 65 KDLYSNCVLSGGSTMFPGIADRMQKEIAMLANASMKVKVIAPPERKYSVWIGGSILASLS 124
Query: 604 TFQQMWISKEEYDESGPGIVHRKCF 678
TFQQMWI+KEEY E GP IVHRKCF
Sbjct: 125 TFQQMWIAKEEYHEYGPPIVHRKCF 149
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 207 bits (506), Expect = 6e-54
Identities = 92/152 (60%), Positives = 117/152 (76%)
Frame = +1
Query: 1 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 180
G V D GDGVSHTVP+Y+GY LPHA R+DLAGRDLT YL +++TERGYSF +TAE++I+
Sbjct: 2195 GTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERGYSFQSTAEQQII 2254
Query: 181 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 360
RD+KE LCY A+D+E+E+ A S E Y LPDGQ I IG+ERFR E LFQPS LG
Sbjct: 2255 RDLKETLCYCAMDYERELKEAETSDDCEAPYMLPDGQSIRIGSERFRAAEPLFQPSLLGR 2314
Query: 361 ESCGIHETVYNSIMKCDVDIRKDLYANTVMSG 456
+ GIHE+++ SI KCD+D+R +L+ N V+SG
Sbjct: 2315 DIDGIHESIFKSIKKCDIDLRAELFHNIVLSG 2346
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 206 bits (502), Expect = 2e-53
Identities = 107/246 (43%), Positives = 152/246 (61%), Gaps = 29/246 (11%)
Frame = +1
Query: 1 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 180
G+V+DSGDGV+H P+YEG+ALPH RLD+AGRD+T YL+K++ RGY+F TA+ E V
Sbjct: 154 GVVIDSGDGVTHICPVYEGFALPHLTRRLDIAGRDITKYLIKLMLLRGYAFNHTADFETV 213
Query: 181 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 360
R +KEKLCYV + EQE A +T L + Y LPDG+V+ + ERF PEALFQP + +
Sbjct: 214 RMMKEKLCYVGYNIEQEQKLALETTVLVEQYTLPDGRVVKLSGERFEAPEALFQPHLINV 273
Query: 361 ESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL--------- 513
E G+ E ++N+I D+D R + Y + V+SGG+TMYPG+ R+++EI L
Sbjct: 274 EGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLEREIKQLYLERVLKGD 333
Query: 514 ------------APSTI-----KIKI-IAPP-ERKYSVWIGGSILAS-LSTFQQMWISKE 633
P T K KI I P RK+ V++GG++LA + W++++
Sbjct: 334 TSKLSSGMGMEQIPLTADYLLQKFKIRIEDPPRRKHMVFMGGAVLADIMKDKDSFWMTRK 393
Query: 634 EYDESG 651
EY+E G
Sbjct: 394 EYEEKG 399
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 155 bits (375), Expect = 5e-38
Identities = 71/78 (91%), Positives = 75/78 (96%)
Frame = +1
Query: 1 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 180
G+V DSGDGVSH VPIYEGYALPHAILRLDLAGRDLTDYLMK++TERGYSFTTTAEREIV
Sbjct: 29 GVVFDSGDGVSHNVPIYEGYALPHAILRLDLAGRDLTDYLMKLMTERGYSFTTTAEREIV 88
Query: 181 RDIKEKLCYVALDFEQEM 234
RDIKEKLCYVALDF QE+
Sbjct: 89 RDIKEKLCYVALDFYQEI 106
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 95.5 bits (227), Expect = 4e-20
Identities = 48/119 (40%), Positives = 72/119 (60%), Gaps = 1/119 (0%)
Frame = +1
Query: 1 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE-RGYSFTTTAEREI 177
G+ L SG + IYEG+ L H + L++ G LT+ L + L + RG++FT+++ +I
Sbjct: 780 GVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQRGHNFTSSSGWQI 839
Query: 178 VRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFL 354
V DIKEK+CY++ D +E+ + L K Y LPDGQ+I+IG E E LF+P L
Sbjct: 840 VNDIKEKICYLSKDHLKEVHNYKTNEGLTKFYTLPDGQMISIGYECISSMEPLFRPDLL 898
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 92.3 bits (219), Expect = 4e-19
Identities = 39/66 (59%), Positives = 56/66 (84%)
Frame = +1
Query: 1 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 180
G+VLD+GDGVSH+VPIYEG+A+PH+I+R D+AGRD++ YL +L + G+ F +++E EIV
Sbjct: 176 GVVLDAGDGVSHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEGHCFHSSSELEIV 235
Query: 181 RDIKEK 198
R IKE+
Sbjct: 236 RTIKEE 241
Score = 38.3 bits (85), Expect = 0.007
Identities = 16/35 (45%), Positives = 26/35 (74%)
Frame = +1
Query: 373 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPG 477
I E + +I K D+D+R+ LY+N V+SGG+T++ G
Sbjct: 257 IIEVLAFAIQKSDLDLRRVLYSNIVLSGGSTLFKG 291
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 85.8 bits (203), Expect = 3e-17
Identities = 48/145 (33%), Positives = 74/145 (51%), Gaps = 17/145 (11%)
Frame = +1
Query: 295 ITIGNERFRCPEALFQPSFLGME-SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMY 471
+ + ERF PE F P F + + + E V N I C +D+R+ LY N V+SGG+TM+
Sbjct: 196 VDVAYERFLGPEIFFHPEFSNPDFTTPLSEVVDNVIQNCPIDVRRPLYKNIVLSGGSTMF 255
Query: 472 PGIADRMQKEIT----------------ALAPSTIKIKIIAPPERKYSVWIGGSILASLS 603
R+Q++I + P I+ ++I+ ++Y+VW GGS+LAS
Sbjct: 256 RDFGRRLQRDIKRTVDARLKMSETLSGGRIKPKPIETQVISHHMQRYAVWFGGSMLASTP 315
Query: 604 TFQQMWISKEEYDESGPGIVHRKCF 678
F + +K +YDE GP I F
Sbjct: 316 EFYSVCHTKADYDEHGPSICRHNPF 340
Score = 68.5 bits (160), Expect = 5e-12
Identities = 30/79 (37%), Positives = 46/79 (58%)
Frame = +1
Query: 1 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 180
G V+DSGDGV+H +P+ EGY + I + +AGRD+T ++ ++L ER E
Sbjct: 63 GCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITFFVQQLLREREMGIPPEQSMETA 122
Query: 181 RDIKEKLCYVALDFEQEMA 237
+ IKE+ Y+ D +E A
Sbjct: 123 KTIKERWGYICPDIAKEFA 141
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 67.7 bits (158), Expect = 9e-12
Identities = 29/85 (34%), Positives = 55/85 (64%), Gaps = 3/85 (3%)
Frame = +1
Query: 355 GMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKI 534
G + G+ + V S+ D+DIR L+ + +++GG T+ G +R+ +E+ + P ++++
Sbjct: 146 GSTAMGVTQVVTTSVGMTDIDIRAGLFNSVIVTGGNTLLQGFVERLNRELVSKTPPSMRL 205
Query: 535 KII---APPERKYSVWIGGSILASL 600
K+I + E++++ WIGGSILASL
Sbjct: 206 KLISNNSSVEKRFNPWIGGSILASL 230
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/46 (39%), Positives = 28/46 (60%)
Frame = +1
Query: 1 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 138
G+V+DSG + VP+++GY L AI+R LAG +T ++ E
Sbjct: 83 GLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAGDFITAQCRQMFEE 128
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 54.0 bits (124), Expect = 1e-07
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 9/104 (8%)
Frame = +1
Query: 361 ESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPST----- 525
E + + +S++ C +D RK L N V+ GGT M PG R+ +EI L S
Sbjct: 54 EEKSLATALLDSLLLCPIDTRKTLAENIVLIGGTAMTPGFKHRLMQEIYLLLQSPKYKDK 113
Query: 526 --IK-IKIIAPP-ERKYSVWIGGSILASLSTFQQMWISKEEYDE 645
IK +K+ PP + W+GG+I SL ++E Y +
Sbjct: 114 LFIKTVKMHQPPVNANITAWLGGAIFGSLEVLADRSTTRERYQQ 157
>SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 32.7 bits (71), Expect = 0.32
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +1
Query: 325 PEALFQPSFLGMESCGIHETV 387
PE +FQPS LG+E GI ET+
Sbjct: 3 PEIIFQPSMLGLEQAGITETM 23
>SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054)
Length = 1079
Score = 31.9 bits (69), Expect = 0.56
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = +3
Query: 369 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRS 548
R P+DR + HH RR H +HR H R++R+ +G+ L+ +D
Sbjct: 830 RPPQDRHRRHHHRRRHHN----NKHRKHSREHSRRRHQRKHHKGNDAQETLEEIFED--D 883
Query: 549 PREEVLRMDRWIHPG 593
R+E +D +++ G
Sbjct: 884 ARDEKENVDEFVNGG 898
Score = 27.9 bits (59), Expect = 9.2
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +3
Query: 345 FLPGYGIVRHP-RDRVQLHHEV-RRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRA 518
F+ G G++ H + Q+ E R + G +HRH R +HH ++ R+ + + A
Sbjct: 894 FVNGGGMMEHELQSDSQISQETGARENDPGKKHKHRHRRHHHHRRQHNRKIKKHRRKHSA 953
Query: 519 LDHQ 530
H+
Sbjct: 954 RKHE 957
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 30.3 bits (65), Expect = 1.7
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +1
Query: 1 GIVLDSGDGVSHTVPI 48
G V+DSGDGV+H +P+
Sbjct: 357 GCVIDSGDGVTHVIPV 372
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 29.1 bits (62), Expect = 4.0
Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 3/97 (3%)
Frame = +1
Query: 4 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 183
+V+D+G +H VP++ G + A+ R + +L E +F ++
Sbjct: 359 LVVDTGYSFTHIVPVFNGKVIKKAVRRQ-----------LHVLDE---TF-------VIN 397
Query: 184 DIKEKLCYVALDFEQEMATA---AASTSLEKSYELPD 285
+KE CYV+ F ++M A ++ + Y LPD
Sbjct: 398 QVKEDTCYVSSQFYKDMEIARQRGKENTIVREYVLPD 434
>SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1973
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -1
Query: 587 MDPPIHTEYFLSGGAMILILMVEGARAVISFCILSAIPGYMV-VPPD 450
+DPP+ +Y L+GG ++ ++ FCI G++V PP+
Sbjct: 758 LDPPLENKYNLNGGQQVIQSTLQIQSLFFPFCIFQ---GFVVPTPPE 801
>SB_7681| Best HMM Match : Annexin (HMM E-Value=0)
Length = 426
Score = 28.7 bits (61), Expect = 5.3
Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 2/75 (2%)
Frame = +3
Query: 372 HPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDH--R 545
HP ++ HHE R P H H P ++ E P DH++++
Sbjct: 316 HPPEQ---HHEEEERGVHPPGEHHEEEERGAHPPGQDLEEEERGAHPPGQDHEEEERGAH 372
Query: 546 SPREEVLRMDRWIHP 590
P + +R +HP
Sbjct: 373 PPEQHHEEEERGVHP 387
>SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 28.3 bits (60), Expect = 7.0
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1
Query: 439 NTVMSGGTTMYPGIADRMQKEITALAP 519
N ++GG TMY R+++E+ A+ P
Sbjct: 132 NVFVTGGNTMYNNFMARLERELLAIRP 158
>SB_24438| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 28.3 bits (60), Expect = 7.0
Identities = 20/77 (25%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Frame = +3
Query: 369 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYR--RQDAEGDHRPR--ALDHQDQ 536
RH R R + R RH RH H R++ R + R R H+
Sbjct: 23 RHERSRHETRQHERSRHKTSRHESSRHKTSRHERSRHKTSRHETSRHERSRHETRQHERS 82
Query: 537 DHRSPREEVLRMDRWIH 587
H++ R E R ++ H
Sbjct: 83 RHKTSRHETSRHEKSRH 99
>SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2202
Score = 28.3 bits (60), Expect = 7.0
Identities = 18/69 (26%), Positives = 27/69 (39%)
Frame = +3
Query: 324 SRGSLPAFLPGYGIVRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGD 503
+R ++P LPG H R R HH ++H ++ HH Q +
Sbjct: 930 ARPNMPGTLPGNYPESHKRHRHSHHHH------------YQHYQYNHHHDHQSHQHHDSH 977
Query: 504 HRPRALDHQ 530
H LDH+
Sbjct: 978 HHREVLDHK 986
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 28.3 bits (60), Expect = 7.0
Identities = 30/89 (33%), Positives = 36/89 (40%), Gaps = 3/89 (3%)
Frame = +3
Query: 366 VRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVP-RYRRQDAEGDHRPRALDHQDQD- 539
V HPR V +H HP V HR +H + RQDA DH + + H QD
Sbjct: 606 VVHPRRDV-VHPRQDVVHPRQDVDHHRQDVDHHRQDVDHHRQDA--DHHRQDVVHPRQDV 662
Query: 540 -HRSPREEVLRMDRWIHPGFPVHLPADVD 623
HR + R D H VH D D
Sbjct: 663 VHRRQDADHRRQDADHHRQDVVHPRQDAD 691
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 28.3 bits (60), Expect = 7.0
Identities = 20/57 (35%), Positives = 24/57 (42%)
Frame = +3
Query: 375 PRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHR 545
PRDR + E RRR P R+ R + Y PR RR+ R R D R
Sbjct: 854 PRDRRRRSPEHRRRREASPPRRDR--KRYDSPPRRRRRSPSPPPRRRRRDSYSPSRR 908
>SB_10094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +1
Query: 436 ANTVMSGGTTMYPGIADRMQKEITALAP-STIKIKIIAPPE 555
AN V+ + + +R+ KE+ L +K KIIAPPE
Sbjct: 44 ANPVIHPARKVPVSLGERLDKELNRLTELGIVKEKIIAPPE 84
>SB_4199| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 27.9 bits (59), Expect = 9.2
Identities = 18/73 (24%), Positives = 27/73 (36%)
Frame = +3
Query: 369 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRS 548
RH R R + R RH RH H R++ E R+ H+ + H
Sbjct: 63 RHERSRHETRQHERSRHKTSRHESSRHKTSRHGRSRHKTSRHETSRHERS-RHETRQHER 121
Query: 549 PREEVLRMDRWIH 587
R + R ++ H
Sbjct: 122 SRHKTSRHEKSRH 134
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +1
Query: 190 KEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPE 330
+EK+ L+ E E A + LEK +L + +G+ER RC +
Sbjct: 2983 REKIVTSDLESELETERALQANELEKQNKLLEKLSADLGHERSRCED 3029
>SB_45720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 27.9 bits (59), Expect = 9.2
Identities = 16/67 (23%), Positives = 25/67 (37%), Gaps = 2/67 (2%)
Frame = +3
Query: 396 HHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDH--RSPREEVLR 569
HHE R P + H H P ++ E P H++++ P E
Sbjct: 154 HHEEEERGVHPPGQHHEEEERGVHPPGQHHEEEERGVHPPGQHHEEEERGVHPPEEHHEE 213
Query: 570 MDRWIHP 590
+R +HP
Sbjct: 214 EERGVHP 220
>SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85)
Length = 647
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/65 (23%), Positives = 29/65 (44%)
Frame = +3
Query: 366 VRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHR 545
++HP ++ H + ++ P + HHVP + +A G+ R Q+ D+
Sbjct: 550 IQHPVEKAIQHAQEKKYQP----ELEKKTIKSHHVPGQDKTEARGEERIAVWSTQNGDYY 605
Query: 546 SPREE 560
R+E
Sbjct: 606 DQRDE 610
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,502,777
Number of Sequences: 59808
Number of extensions: 492760
Number of successful extensions: 1731
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1706
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2010148439
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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