Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_E11
(743 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 427 e-120
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 427 e-120
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 427 e-120
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 421 e-118
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 421 e-118
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 421 e-118
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 416 e-117
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 415 e-116
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 394 e-110
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 377 e-105
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 357 6e-99
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 343 1e-94
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 213 8e-56
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 159 2e-39
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 141 4e-34
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 120 8e-28
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 102 2e-22
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 101 4e-22
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 76 2e-14
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 58 6e-09
At5g43500.2 68418.m05318 expressed protein 46 4e-05
At5g43500.1 68418.m05319 expressed protein 46 4e-05
At3g14720.1 68416.m01861 mitogen-activated protein kinase, putat... 34 0.087
At1g53510.1 68414.m06068 mitogen-activated protein kinase, putat... 29 2.5
At3g24130.1 68416.m03030 pectinesterase family protein contains ... 29 3.3
At1g65780.1 68414.m07465 tRNA-splicing endonuclease positive eff... 29 3.3
At5g04940.2 68418.m00523 SET domain-containing protein (SUVH1) c... 29 4.3
At5g04940.1 68418.m00522 SET domain-containing protein (SUVH1) c... 29 4.3
At2g46430.1 68415.m05778 cyclic nucleotide-regulated ion channel... 28 7.5
At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp... 27 9.9
At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp... 27 9.9
At4g30520.1 68417.m04333 leucine-rich repeat family protein / pr... 27 9.9
At3g24210.1 68416.m03038 ankyrin repeat family protein contains ... 27 9.9
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 427 bits (1052), Expect = e-120
Identities = 197/226 (87%), Positives = 212/226 (93%)
Frame = +1
Query: 1 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 180
GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT+AEREIV
Sbjct: 152 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTSAEREIV 211
Query: 181 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 360
RD+KEKL Y+ALD+EQEM TA S+S+EKSYELPDGQVITIG ERFRCPE LFQPS +GM
Sbjct: 212 RDVKEKLAYIALDYEQEMETANTSSSVEKSYELPDGQVITIGGERFRCPEVLFQPSLVGM 271
Query: 361 ESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 540
E+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+PGIADRM KEITALAPS++KIK+
Sbjct: 272 EAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKV 331
Query: 541 IAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 678
+APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 332 VAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 427 bits (1051), Expect = e-120
Identities = 196/226 (86%), Positives = 213/226 (94%)
Frame = +1
Query: 1 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 180
GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIV
Sbjct: 152 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIV 211
Query: 181 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 360
RDIKEKLCY+ALD+EQE+ TA S+S+EK+YELPDGQVITIG+ERFRCPE L+QPS +GM
Sbjct: 212 RDIKEKLCYIALDYEQELETAKTSSSVEKNYELPDGQVITIGSERFRCPEVLYQPSMIGM 271
Query: 361 ESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 540
E+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+PGIADRM KEITALAPS++KIK+
Sbjct: 272 ENAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKV 331
Query: 541 IAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 678
+APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 332 VAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 427 bits (1051), Expect = e-120
Identities = 196/226 (86%), Positives = 213/226 (94%)
Frame = +1
Query: 1 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 180
GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIV
Sbjct: 152 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIV 211
Query: 181 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 360
RDIKEKLCY+ALD+EQE+ TA S+S+EK+YELPDGQVITIG+ERFRCPE L+QPS +GM
Sbjct: 212 RDIKEKLCYIALDYEQELETAKTSSSVEKNYELPDGQVITIGSERFRCPEVLYQPSMIGM 271
Query: 361 ESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 540
E+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+PGIADRM KEITALAPS++KIK+
Sbjct: 272 ENAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKV 331
Query: 541 IAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 678
+APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 332 VAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 421 bits (1036), Expect = e-118
Identities = 196/226 (86%), Positives = 211/226 (93%)
Frame = +1
Query: 1 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 180
GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGY FTTTAEREIV
Sbjct: 152 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYMFTTTAEREIV 211
Query: 181 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 360
RDIKEKL YVALD+EQE+ TA +S+S+EK+YELPDGQVITIG ERFRCPE LFQPS +GM
Sbjct: 212 RDIKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQVITIGAERFRCPEVLFQPSLIGM 271
Query: 361 ESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 540
E+ GIHET YNSIMKCDVDIRKDLY N V+SGG+TM+PGIADRM KEITALAPS++KIK+
Sbjct: 272 EAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKV 331
Query: 541 IAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 678
+APPERKYSVWIGGSILASLSTFQQMWISK EYDESGP IVHRKCF
Sbjct: 332 VAPPERKYSVWIGGSILASLSTFQQMWISKSEYDESGPSIVHRKCF 377
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 421 bits (1036), Expect = e-118
Identities = 194/226 (85%), Positives = 212/226 (93%)
Frame = +1
Query: 1 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 180
GIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY FTTTAEREIV
Sbjct: 152 GIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIV 211
Query: 181 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 360
RDIKEKL +VA+D+EQEM T+ S+S+EK+YELPDGQVITIG ERFRCPE LFQPSF+GM
Sbjct: 212 RDIKEKLSFVAVDYEQEMETSKTSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGM 271
Query: 361 ESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 540
E+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+ GIADRM KEITALAPS++KIK+
Sbjct: 272 EAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKV 331
Query: 541 IAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 678
+APPERKYSVWIGGSILASLSTFQQMWISK EYDE+GPGIVHRKCF
Sbjct: 332 VAPPERKYSVWIGGSILASLSTFQQMWISKAEYDEAGPGIVHRKCF 377
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 421 bits (1036), Expect = e-118
Identities = 194/226 (85%), Positives = 212/226 (93%)
Frame = +1
Query: 1 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 180
GIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY FTTTAEREIV
Sbjct: 152 GIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIV 211
Query: 181 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 360
RDIKEKL +VA+D+EQEM T+ S+S+EK+YELPDGQVITIG ERFRCPE LFQPSF+GM
Sbjct: 212 RDIKEKLSFVAVDYEQEMETSKTSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGM 271
Query: 361 ESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 540
E+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+ GIADRM KEITALAPS++KIK+
Sbjct: 272 EAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKV 331
Query: 541 IAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 678
+APPERKYSVWIGGSILASLSTFQQMWISK EYDE+GPGIVHRKCF
Sbjct: 332 VAPPERKYSVWIGGSILASLSTFQQMWISKAEYDEAGPGIVHRKCF 377
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 416 bits (1025), Expect = e-117
Identities = 193/226 (85%), Positives = 210/226 (92%)
Frame = +1
Query: 1 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 180
GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD+LMKILTERGYSFTTTAEREIV
Sbjct: 152 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIV 211
Query: 181 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 360
RD+KEKL Y+ALDFEQE+ T+ S+S+EKS+ELPDGQVITIG ERFRCPE LFQPS +GM
Sbjct: 212 RDMKEKLSYIALDFEQELETSKTSSSVEKSFELPDGQVITIGAERFRCPEVLFQPSMIGM 271
Query: 361 ESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 540
E+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+ GI DRM KEITALAPS++KIK+
Sbjct: 272 ENPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFGGIGDRMSKEITALAPSSMKIKV 331
Query: 541 IAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 678
+APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 332 VAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 415 bits (1022), Expect = e-116
Identities = 192/226 (84%), Positives = 210/226 (92%)
Frame = +1
Query: 1 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 180
GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD+LMKILTERGYSFTTTAEREIV
Sbjct: 152 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIV 211
Query: 181 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 360
RD+KEKL Y+ALD+EQE+ T+ S+S+EKS+ELPDGQVITIG ERFRCPE LFQPS +GM
Sbjct: 212 RDMKEKLSYIALDYEQELETSKTSSSVEKSFELPDGQVITIGAERFRCPEVLFQPSMIGM 271
Query: 361 ESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 540
E+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+ GI DRM KEITALAPS++KIK+
Sbjct: 272 ENPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFGGIGDRMSKEITALAPSSMKIKV 331
Query: 541 IAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 678
+APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 332 VAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 394 bits (970), Expect = e-110
Identities = 178/226 (78%), Positives = 203/226 (89%)
Frame = +1
Query: 1 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 180
GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT+YL KI+ ERGY++TT+AEREIV
Sbjct: 153 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTEYLTKIMMERGYTYTTSAEREIV 212
Query: 181 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 360
RDIKEKLCY+A+D+EQEM A S++++++YELPDGQVITIG ERFRCPE LFQ S +GM
Sbjct: 213 RDIKEKLCYIAVDYEQEMEKATTSSAIDRTYELPDGQVITIGAERFRCPEVLFQTSLIGM 272
Query: 361 ESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 540
E+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+PGIADRM KEI ALAP ++KIK+
Sbjct: 273 ETSGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMNKEINALAPPSMKIKV 332
Query: 541 IAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 678
+APPERKYSVW+GGSILASLS+F MWI+K EYDE G IVHRKCF
Sbjct: 333 VAPPERKYSVWVGGSILASLSSFAPMWITKAEYDEQGGAIVHRKCF 378
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 377 bits (927), Expect = e-105
Identities = 176/210 (83%), Positives = 195/210 (92%)
Frame = +1
Query: 1 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 180
GIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY FTTTAEREIV
Sbjct: 152 GIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIV 211
Query: 181 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 360
RDIKEKL +VA+D+EQEM T+ S+S+EK+YELPDGQVITIG ERFRCPE LFQPSF+GM
Sbjct: 212 RDIKEKLSFVAVDYEQEMETSKTSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGM 271
Query: 361 ESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 540
E+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+ GIADRM KEITALAPS++KIK+
Sbjct: 272 EAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKV 331
Query: 541 IAPPERKYSVWIGGSILASLSTFQQMWISK 630
+APPERKYSVWIGGSILASLSTFQQ+ I +
Sbjct: 332 VAPPERKYSVWIGGSILASLSTFQQVKIDQ 361
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 357 bits (877), Expect = 6e-99
Identities = 166/226 (73%), Positives = 194/226 (85%)
Frame = +1
Query: 1 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 180
G VLDSGDGVS+ VPIYEG ALPHAILRLDLAGR LT+YLMKI+ ERGY T+AERE+V
Sbjct: 107 GTVLDSGDGVSYIVPIYEGSALPHAILRLDLAGRHLTNYLMKIMMERGY---TSAEREVV 163
Query: 181 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 360
RDIKE+ Y+ALD+EQEM A S++++++YELPDGQVITIG ERFRCPE LFQPS +GM
Sbjct: 164 RDIKEQFGYIALDYEQEMEKATKSSAIDRTYELPDGQVITIGAERFRCPEVLFQPSLIGM 223
Query: 361 ESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 540
E+ GIHE YNSIMKCD DIRKDLY N V+SGGTTM+ GI +RM KEI ALA + ++IKI
Sbjct: 224 ETSGIHEKTYNSIMKCDDDIRKDLYGNIVLSGGTTMFRGIEERMTKEINALAAANMRIKI 283
Query: 541 IAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 678
+APPERKYSVWIGGSILASLST++QMWI+K EY+E+GP IVH KCF
Sbjct: 284 VAPPERKYSVWIGGSILASLSTYEQMWITKAEYEENGPAIVHTKCF 329
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 343 bits (842), Expect = 1e-94
Identities = 154/225 (68%), Positives = 185/225 (82%)
Frame = +1
Query: 1 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 180
G+VLD G+ VSHTVP+YEGYALPH ILRLDL GRDLTDYL++I+TERGY++TT+AEREIV
Sbjct: 141 GVVLDLGERVSHTVPVYEGYALPHGILRLDLGGRDLTDYLIEIMTERGYTYTTSAEREIV 200
Query: 181 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 360
RDIKEKLCYVALD+EQEM +++K+Y LPDGQ ITI ERF CPE LFQPS +G
Sbjct: 201 RDIKEKLCYVALDYEQEMEKTTKGWTIDKTYVLPDGQEITIEAERFMCPEVLFQPSVIGK 260
Query: 361 ESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 540
ES GIHE NSI+KC VD R+D+Y N +M+GGTTM GI +RM KE+ AL PS++K+K+
Sbjct: 261 ESSGIHEATRNSILKCPVDTRRDMYGNILMTGGTTMLHGIKERMTKELNALVPSSMKVKV 320
Query: 541 IAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKC 675
+ PPE + SVWIGGSILASLSTF QMWI+K+EY+E G IVHRKC
Sbjct: 321 VVPPESECSVWIGGSILASLSTFHQMWITKDEYEEHGAAIVHRKC 365
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 213 bits (521), Expect = 8e-56
Identities = 100/229 (43%), Positives = 154/229 (67%), Gaps = 12/229 (5%)
Frame = +1
Query: 1 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 180
G+V+DSGDGV+H VP+ +GY+ PH R+++AGR +T YL+ +L+ RGY+ TA+ E V
Sbjct: 151 GLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITAYLVDLLSRRGYAMNKTADFETV 210
Query: 181 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 360
R+IKEKLCY++ D+++E +T L K+Y LPDG+VI +G ERF+ PEALF P + +
Sbjct: 211 REIKEKLCYISYDYKRESQLGLETTILVKNYTLPDGRVIKVGTERFQAPEALFTPELIDV 270
Query: 361 ESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEI------TALAPS 522
E G+ + V+ I + D+D R LY + V+SGG+TMYPG+ R++KEI T L +
Sbjct: 271 EGDGMADMVFRCIQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRLEKEIQDRYLDTVLKGN 330
Query: 523 -----TIKIKIIAPPERKYSVWIGGSILAS-LSTFQQMWISKEEYDESG 651
++++I PP RK+ V++GG++LA + + WI++E+Y E G
Sbjct: 331 KDGLKKLRLRIEDPPRRKHMVYLGGAVLAGIMKDAPEFWINREDYMEEG 379
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 159 bits (386), Expect = 2e-39
Identities = 100/269 (37%), Positives = 150/269 (55%), Gaps = 45/269 (16%)
Frame = +1
Query: 4 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG------YSF---- 153
+V+D G G + P+++GY L A++ L G LTD L+K L +G YSF
Sbjct: 175 LVVDCGGGSTTISPVHDGYVLQKAVVSSPLGGEFLTDCLLKSLESKGIKIRPRYSFKRKE 234
Query: 154 ---------------TTTA-----EREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSY 273
TT + +R IV DIK+ +C V + + + T+ SY
Sbjct: 235 VRAGEFQVEDVDIPDTTESYKLFCQRMIVGDIKDSICRVPDTPYDDKSYSNIPTT---SY 291
Query: 274 ELPDGQVITIGNERFRCPEALFQPSFL----GMESC--------GIHETVYNSIMKCDVD 417
ELPDGQ + IG +RF+ P+ +F PS + GME G+ V SI KCDVD
Sbjct: 292 ELPDGQTLEIGADRFKVPDVMFNPSIVQTIPGMEKYAEMIPSVRGLPHMVMESINKCDVD 351
Query: 418 IRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIA---PPERKYSVWIGGSI 588
IR++LY++ +++GGT+ + +R++K++ +P + ++K++A ER++SVWIGGSI
Sbjct: 352 IRRELYSSILLAGGTSSMQQLKERLEKDLIEESPHSARVKVLASGNTTERRFSVWIGGSI 411
Query: 589 LASLSTFQQMWISKEEYDESGPGIVHRKC 675
LASL +FQQMW SK EY+E G + RKC
Sbjct: 412 LASLGSFQQMWFSKSEYEEHGASYIQRKC 440
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 141 bits (342), Expect = 4e-34
Identities = 87/232 (37%), Positives = 117/232 (50%), Gaps = 6/232 (2%)
Frame = +1
Query: 1 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 180
G +D G G P+ EG A R +L G +LT + L + S + V
Sbjct: 138 GCTVDIGHGKIDIAPVLEGAVQHIASKRFELGGTELTKLFAQELGKTNPSMNLSMSD--V 195
Query: 181 RDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 360
+KE+ A E E+A + + LPDGQVI+IG ER+ EALFQPS LG+
Sbjct: 196 EKLKEQYANCA---EDEIAYKKTQNCEIEQHTLPDGQVISIGRERYSVGEALFQPSILGL 252
Query: 361 ESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 540
E GI E + I + + L NTV+ GGTT G R QKE L S I+ +
Sbjct: 253 EEHGIVEQLVRIISTVSSENHRQLLENTVLCGGTTSMTGFESRFQKEAN-LCSSAIRPTL 311
Query: 541 IAPPE------RKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 678
+ PPE YS W+GG+ILA + Q ++K +YDE+GP +VHRKCF
Sbjct: 312 VKPPEYMPENLGMYSAWVGGAILAKVVFPQNQHVTKADYDETGPSVVHRKCF 363
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 120 bits (290), Expect = 8e-28
Identities = 69/243 (28%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Frame = +1
Query: 1 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 180
G+V+D GDG +H VP+ EGY + I + +AG+D+T ++ +++ ERG + ++
Sbjct: 174 GVVVDVGDGATHVVPVAEGYVIGSCIKSIPIAGKDVTLFIQQLMRERGENIPPEDSFDVA 233
Query: 181 RDIKEKLCYVALD----FEQEMATAAASTSLEKSYELPDGQVIT--IGNERFRCPEALFQ 342
R +KE CY D F + A K + G T +G ERF PE F
Sbjct: 234 RKVKEMYCYTCSDIVKEFNKHDKEPAKYIKQWKGVKPKTGAPYTCDVGYERFLGPEVFFN 293
Query: 343 PSFLGME-SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAP 519
P + + + + I +D R+ LY N V+SGG+TM+ R+Q+++ +
Sbjct: 294 PEIYSNDFTTTLPAVIDKCIQSAPIDTRRALYKNIVLSGGSTMFKDFGRRLQRDLKKIVD 353
Query: 520 S----------------TIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESG 651
+ +++ +++ P ++++VW GGS+L+S F +KEEY+E G
Sbjct: 354 ARVLANNARTGGEITSQPVEVNVVSHPVQRFAVWFGGSVLSSTPEFFASCRTKEEYEEYG 413
Query: 652 PGI 660
I
Sbjct: 414 ASI 416
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 102 bits (245), Expect = 2e-22
Identities = 54/173 (31%), Positives = 91/173 (52%)
Frame = +1
Query: 160 TAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALF 339
T + V+D + +++L E+E K ++ + I + NERF PE LF
Sbjct: 250 THTKGYVKDPQAAKRFLSLS-EKESVVVMDKVGERKKADMNKNE-IDLTNERFLVPETLF 307
Query: 340 QPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAP 519
QP+ LGM G+ E + +I C ++ LY + +++GG+T++P + +R++ E+ L P
Sbjct: 308 QPADLGMNQAGLAECIVRAINSCHSYLQPVLYQSIILTGGSTLFPQLKERLEGELRPLVP 367
Query: 520 STIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 678
+KI + VW GGS+LAS F+ M ++K EY+E G R+ F
Sbjct: 368 DHFDVKITTQEDPILGVWRGGSLLASSPDFESMCVTKAEYEELGSARCRRRFF 420
Score = 75.8 bits (178), Expect = 3e-14
Identities = 41/102 (40%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Frame = +1
Query: 4 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 183
+V+D G +H VP+ + L HAI R+DL G+ T+YL ++++ R S E +V
Sbjct: 155 LVVDCGFSFTHAVPVLHNFTLNHAIKRIDLGGKAFTNYLKELVSYR--SINVMDETFLVD 212
Query: 184 DIKEKLCYVALDFEQEMATAAASTSLEKS-YELPDGQVITIG 306
D KEKLC+V+LD +++ A +L KS Y LPDG T G
Sbjct: 213 DAKEKLCFVSLDLLRDLRLARNGNTLIKSTYVLPDGVTHTKG 254
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 101 bits (243), Expect = 4e-22
Identities = 67/220 (30%), Positives = 114/220 (51%), Gaps = 7/220 (3%)
Frame = +1
Query: 1 GIVLDSGDGVSHTVPIYEGYALPHAILR-LDLAGRDLTDYLMKILTERGYSFTTTAEREI 177
GIV++ G V +PI G + + + LT +L + + E SF +
Sbjct: 252 GIVVNIGFQVITILPILHGKVMRQVGVEVIGFGALKLTGFLKEKMQENNISFQSLYT--- 308
Query: 178 VRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLG 357
VR +KEKLCYVALD++ E+ S + S E+ T+ ERF+ E LFQP G
Sbjct: 309 VRTLKEKLCYVALDYKAEL-----SKDTQASVEVSGEGWFTLSKERFQTGEILFQPRLAG 363
Query: 358 MESCGIHETVYNSIMKCD-VDIRKD--LYANTVMSGGTTMYPGIADRMQKEITALAPSTI 528
M + +H+ V + CD + D + V++GG+ PG+++R+++E+ PS+I
Sbjct: 364 MRAMSLHQAVSLCMDHCDAAGLTGDDSWFKTVVLTGGSACLPGLSERLERELQDHLPSSI 423
Query: 529 K--IKIIAPPERKYSVWIGGSILASLSTFQQMW-ISKEEY 639
I++I PP + W G ++++LS F W I+++++
Sbjct: 424 SNGIRVIPPPYGVDTSWHGAKLISNLSIFPGPWCITRKQF 463
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 76.2 bits (179), Expect = 2e-14
Identities = 48/168 (28%), Positives = 83/168 (49%), Gaps = 6/168 (3%)
Frame = +1
Query: 166 EREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELP---DGQVITIGNERFRCPEAL 336
E E+ R + +L + F Q++ + TS E P + I IG ERFRCPE L
Sbjct: 544 EAELAR-LSSRLQEIDPTFVQKVEGELSQTSGEVPRVRPLTEEDYKIVIGIERFRCPEIL 602
Query: 337 FQPSFLGMESCGIHETVYNSIMKC---DVDIRKDLYANTVMSGGTTMYPGIADRMQKEIT 507
F P+ +G++ G+ E SI + + ++ + L ++ +M+GG ++ PG+ +R++ I
Sbjct: 603 FHPNLIGIDQVGLDEMAGTSIRRLPHDEKELEERLTSSILMTGGCSLLPGMNERLECGIR 662
Query: 508 ALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESG 651
+ P I ++ + W G S A+ F +K +YDE G
Sbjct: 663 MIRPCGSPINVVRAMDPVLDAWRGASAFAANLNFLGNAFTKMDYDEKG 710
Score = 45.2 bits (102), Expect = 5e-05
Identities = 23/78 (29%), Positives = 42/78 (53%)
Frame = +1
Query: 1 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 180
GIVL G +H++P +G + R ++ G +TDYL ++L+ + ++ E
Sbjct: 171 GIVLCPGFTTTHSIPFVDGEPIYKGSSRTNIGGYHVTDYLKQLLSLKYPFHSSRFTWEKA 230
Query: 181 RDIKEKLCYVALDFEQEM 234
D+K + CY+A D+ E+
Sbjct: 231 EDLKLEHCYIAPDYASEI 248
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 58.0 bits (134), Expect = 6e-09
Identities = 43/131 (32%), Positives = 64/131 (48%), Gaps = 1/131 (0%)
Frame = +1
Query: 1 GIVLDSGDGVSHTVPIYEGYALPHAILR-LDLAGRDLTDYLMKILTERGYSFTTTAEREI 177
GIV++ G V +PI G + + + LT +L + + E SF +
Sbjct: 252 GIVVNIGFQVITILPILHGKVMRQVGVEVIGFGALKLTGFLKEKMQENNISFQSLYT--- 308
Query: 178 VRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLG 357
VR +KEKLCYVALD++ E+ S + S E+ T+ ERF+ E LFQP G
Sbjct: 309 VRTLKEKLCYVALDYKAEL-----SKDTQASVEVSGEGWFTLSKERFQTGEILFQPRLAG 363
Query: 358 MESCGIHETVY 390
+ +H+ VY
Sbjct: 364 II---VHKLVY 371
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 45.6 bits (103), Expect = 4e-05
Identities = 24/102 (23%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Frame = +1
Query: 361 ESCGIHETVYNSIMKCD-VDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIK 537
E G+ E + +SI+ +D+R+ L+++ + GG + G+ +++ + P T I
Sbjct: 458 EKIGLAEAITSSILSAGRIDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAID 517
Query: 538 II----APPERKYSVWIGGSILASLSTFQQMWISKEEYDESG 651
+ + E ++ W GG+IL L ++ WI + ++ +G
Sbjct: 518 TVQVLPSRTEPQFVTWKGGAILGILDFGREAWIERHQWMVNG 559
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 45.6 bits (103), Expect = 4e-05
Identities = 24/102 (23%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Frame = +1
Query: 361 ESCGIHETVYNSIMKCD-VDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIK 537
E G+ E + +SI+ +D+R+ L+++ + GG + G+ +++ + P T I
Sbjct: 470 EKIGLAEAITSSILSAGRIDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAID 529
Query: 538 II----APPERKYSVWIGGSILASLSTFQQMWISKEEYDESG 651
+ + E ++ W GG+IL L ++ WI + ++ +G
Sbjct: 530 TVQVLPSRTEPQFVTWKGGAILGILDFGREAWIERHQWMVNG 571
>At3g14720.1 68416.m01861 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK19) identical to mitogen-activated
protein kinase (MAPK)(AtMPK19), PMID:12119167;
Length = 586
Score = 34.3 bits (75), Expect = 0.087
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = +1
Query: 373 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPP 552
I E +Y I++ + KD Y N+ G + +YP ++K+ L ++ K + PP
Sbjct: 336 IRELIYREILEYHPQLLKD-YMNS--EGSSFLYPSAIGHLRKQFAYLEENSGKSGPVIPP 392
Query: 553 ERKYS 567
+RK++
Sbjct: 393 DRKHA 397
>At1g53510.1 68414.m06068 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK18) mitogen-activated protein
kinase (MAPK)(AtMPK18), PMID:12119167
Length = 603
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/65 (23%), Positives = 32/65 (49%)
Frame = +1
Query: 373 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPP 552
I E +Y I++ + KD + + G +YP ++++ T L ++ + + P
Sbjct: 336 IRELIYREILEYHPQLLKDYMSGS--EGSNFVYPSAIGHLRQQFTYLEENSSRNGPVIPL 393
Query: 553 ERKYS 567
ERK++
Sbjct: 394 ERKHA 398
>At3g24130.1 68416.m03030 pectinesterase family protein contains
Pfam profile: PF01095 Pectinesterase
Length = 335
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -3
Query: 168 LSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGY 40
L G G+R+T + D H V Q T ++ V +S+TF + Y
Sbjct: 86 LVGAGKRLTRVEWDDHYSVAQSPTFSTLADNTVVKSITFANSY 128
>At1g65780.1 68414.m07465 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 1065
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +1
Query: 169 REIVRDIKEKLCYVALDFEQEMATAAASTSLE 264
R +++D KE+ C+ + ++ +A A AST++E
Sbjct: 826 RNLIQDAKERGCFHSAGEDESLAQAIASTNIE 857
>At5g04940.2 68418.m00523 SET domain-containing protein (SUVH1)
contains Pfam profiles PF00856: SET domain, PF05033:
Pre-SET motif, PF02182: YDG/SRA domain; identical to
cDNA SUVH1 (SUVH1) GI:13517742
Length = 670
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 36 HRTHLRRLRSAPRHPPSGLGWSRLDRLPHEDPHREGLLV 152
H T +L AP PP+ W+ + + P R+GL++
Sbjct: 348 HNTFKYKLVRAPGQPPAFASWTAIQKWKTGVPSRQGLIL 386
>At5g04940.1 68418.m00522 SET domain-containing protein (SUVH1)
contains Pfam profiles PF00856: SET domain, PF05033:
Pre-SET motif, PF02182: YDG/SRA domain; identical to
cDNA SUVH1 (SUVH1) GI:13517742
Length = 670
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 36 HRTHLRRLRSAPRHPPSGLGWSRLDRLPHEDPHREGLLV 152
H T +L AP PP+ W+ + + P R+GL++
Sbjct: 348 HNTFKYKLVRAPGQPPAFASWTAIQKWKTGVPSRQGLIL 386
>At2g46430.1 68415.m05778 cyclic nucleotide-regulated ion channel /
cyclic nucleotide-gated channel (CNGC3) identical to
cyclic nucleotide and calmodulin-regulated ion channel
GI:4581201 from [Arabidopsis thaliana]
Length = 706
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = -1
Query: 488 LSAIPGYMVVPPDMTVLA--YRSLRMSTSHFMMELYTVSWMPHDSIPRKEGWKR 333
L+ + G+++ D+ +A YR L M Y+V W + + WKR
Sbjct: 571 LTEVEGFLLSADDLKFVATQYRRLHSKQLRHMFRFYSVQWQTWAACFIQAAWKR 624
>At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 844
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +3
Query: 369 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDH-QDQDH 542
RH RD+ + + +HRH + Y D EG+HR R+ H +D D+
Sbjct: 672 RHSRDKHKHESSSDDEYHSRSRHRHRHSKSSDRHELYDSSDNEGEHRHRSSKHSKDVDY 730
>At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 843
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +3
Query: 369 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDH-QDQDH 542
RH RD+ + + +HRH + Y D EG+HR R+ H +D D+
Sbjct: 672 RHSRDKHKHESSSDDEYHSRSRHRHRHSKSSDRHELYDSSDNEGEHRHRSSKHSKDVDY 730
>At4g30520.1 68417.m04333 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 648
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -1
Query: 410 SHFMMELYTVSWMPHDSIPRKEGWKRASGQRNLSLPMVIT*PSGS 276
S F MEL +S H ++ R G+ SG+R L P + P+GS
Sbjct: 343 SQFRMELEMISLAVHKNLLRLIGYCATSGERLLVYPYM---PNGS 384
>At3g24210.1 68416.m03038 ankyrin repeat family protein contains
ankyrin repeats, Pfam domain PF00023
Length = 607
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 489 DAEGDHRPRALDHQDQDHRSPREEVLRMDRWIHPGFPV 602
D E +P+AL H S ++ LR W+ P FP+
Sbjct: 423 DNEHYRKPKALVSDKTRHESEYKKGLRPVLWLSPNFPL 460
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,465,860
Number of Sequences: 28952
Number of extensions: 325817
Number of successful extensions: 1187
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1171
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1643603136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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