Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_E10
(737 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 296 3e-79
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 287 2e-76
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 229 7e-59
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 227 2e-58
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 215 9e-55
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 209 5e-53
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 202 7e-51
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 194 2e-48
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 192 6e-48
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 184 2e-45
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 183 4e-45
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 182 1e-44
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 179 8e-44
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 174 2e-42
UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 172 7e-42
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 165 1e-39
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 156 6e-37
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 130 3e-29
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 129 6e-29
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 117 3e-25
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 107 3e-22
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 107 3e-22
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 104 3e-21
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 95 1e-18
UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiell... 93 9e-18
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 86 7e-16
UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermop... 85 2e-15
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 85 2e-15
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 84 4e-15
UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, w... 82 1e-14
UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1; Nanoarc... 81 3e-14
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 77 3e-13
UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarc... 69 1e-10
UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular org... 56 1e-06
UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium c... 55 2e-06
UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ... 49 1e-04
UniRef50_A7QKL2 Cluster: Chromosome chr2 scaffold_113, whole gen... 42 0.016
UniRef50_A7Q400 Cluster: Chromosome chr13 scaffold_48, whole gen... 38 0.26
UniRef50_Q9UFE2 Cluster: Putative uncharacterized protein DKFZp4... 36 0.78
UniRef50_Q9VDD2 Cluster: CG17299-PF, isoform F; n=18; Diptera|Re... 36 1.0
UniRef50_Q5NB71 Cluster: Putative uncharacterized protein P0431F... 36 1.4
UniRef50_UPI0000F2E379 Cluster: PREDICTED: hypothetical protein;... 35 2.4
UniRef50_A2QMQ0 Cluster: Contig An07c0080, complete genome; n=11... 34 3.2
UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3; ... 34 4.2
UniRef50_A2X658 Cluster: Putative uncharacterized protein; n=3; ... 34 4.2
UniRef50_Q6PEV8 Cluster: Uncharacterized protein CXorf39; n=19; ... 34 4.2
UniRef50_Q4RK83 Cluster: Chromosome 2 SCAF15032, whole genome sh... 33 5.5
UniRef50_Q52PH1 Cluster: Golden2-like transcription factor; n=8;... 33 5.5
UniRef50_A3UKR0 Cluster: Probable C-5 cytosine-specific DNA meth... 33 9.7
UniRef50_A1HES9 Cluster: Putative uncharacterized protein; n=1; ... 33 9.7
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 296 bits (727), Expect = 3e-79
Identities = 139/210 (66%), Positives = 159/210 (75%)
Frame = +1
Query: 106 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQT 285
ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AGHQT
Sbjct: 4 ARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQT 62
Query: 286 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXX 465
SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 63 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRY 122
Query: 466 XXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILK 645
++GH IE++PELPLVV DKV+ KTK+AV+ L++LKAW+DI K
Sbjct: 123 AICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKK 182
Query: 646 VYKSXRLRAGKGKMRNRRRIXRKGPLIIFN 735
VY S R+RAGKGKMRNRRRI R+GP II+N
Sbjct: 183 VYASQRMRAGKGKMRNRRRIQRRGPCIIYN 212
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 287 bits (704), Expect = 2e-76
Identities = 133/210 (63%), Positives = 160/210 (76%)
Frame = +1
Query: 106 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQT 285
ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+ AGHQT
Sbjct: 6 ARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQT 65
Query: 286 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXX 465
SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 66 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRY 125
Query: 466 XXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILK 645
Q++GH+I+ + E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI K
Sbjct: 126 ALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQK 185
Query: 646 VYKSXRLRAGKGKMRNRRRIXRKGPLIIFN 735
VYKS R RAG+G MR+RRRI R+GPL++++
Sbjct: 186 VYKSQRFRAGRGTMRDRRRIARRGPLVVYD 215
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 229 bits (559), Expect = 7e-59
Identities = 110/208 (52%), Positives = 137/208 (65%)
Frame = +1
Query: 106 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQT 285
ARP VSVYS S++V G PLP VF APIR D+V VH +M+KNSRQ Y V++ +G
Sbjct: 3 ARPSVSVYSASSDSVVGTC-PLPAVFTAPIRSDIVKFVHTNMAKNSRQAYAVNRLSGMNH 61
Query: 286 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXX 465
SA SWGTGRAVARIPR+ GGGT SG GAFGNMCRGGRMFAPTK +RRWH
Sbjct: 62 SAHSWGTGRAVARIPRISGGGTSTSGAGAFGNMCRGGRMFAPTKIFRRWHRKINLHQKRF 121
Query: 466 XXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILK 645
+RGH I +PE+PLVV D +Q KTK+A+ FL+ + A D+ +
Sbjct: 122 AVVSALAASSVPSLVMSRGHQIGNVPEVPLVVEDSIQGYEKTKEAMAFLKAIAAIDDVNR 181
Query: 646 VYKSXRLRAGKGKMRNRRRIXRKGPLII 729
V S +RAG+GKMRNRR + R+GP+++
Sbjct: 182 VNDSREIRAGRGKMRNRRYVARRGPMLV 209
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 227 bits (556), Expect = 2e-58
Identities = 113/213 (53%), Positives = 137/213 (64%), Gaps = 3/213 (1%)
Frame = +1
Query: 106 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQT 285
+RP VSV S T G PLP VF +PIRPD+V VH M+KN RQPY VS++AGHQT
Sbjct: 3 SRPTVSVLSADG-TATGTTIPLPKVFTSPIRPDIVQTVHTGMAKNKRQPYAVSEKAGHQT 61
Query: 286 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXX 465
SAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH
Sbjct: 62 SAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWHQKINLGQKRF 121
Query: 466 XXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQE---INKTKQAVIFLRRLKAWSD 636
ARGH I ++ E+PLV+ +V E I +T A L+ + A D
Sbjct: 122 ATVSALAASGVPALLFARGHQISEVAEVPLVINSEVFEGAKIARTAAAAGLLKTVGALKD 181
Query: 637 ILKVYKSXRLRAGKGKMRNRRRIXRKGPLIIFN 735
+ KV S +LRAGKGK+R RR R+GPL++++
Sbjct: 182 VEKVKDSRKLRAGKGKLRGRRHRQRRGPLVVYD 214
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 215 bits (525), Expect = 9e-55
Identities = 107/211 (50%), Positives = 133/211 (63%), Gaps = 2/211 (0%)
Frame = +1
Query: 106 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQT 285
ARP+VSV+ T ++ PLP VF +P+R DLV V +MSKN RQ Y VS +AGHQ
Sbjct: 4 ARPIVSVFPSNDSTKATSSIPLPTVFVSPLRHDLVRYVFTNMSKNKRQAYGVSTKAGHQH 63
Query: 286 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXX 465
SAESWGTGRAVARIPRV GT RSGQGAFGNMCRGG MF+P K +RR+H
Sbjct: 64 SAESWGTGRAVARIPRVSASGTSRSGQGAFGNMCRGGHMFSPNKTYRRFHRKINTTEKRH 123
Query: 466 XXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRL-KAWSDIL 642
ARGH I +PELPLV+++++Q INKT AV F + K + +
Sbjct: 124 AVAAAIAATGCPSLVMARGHRINNVPELPLVISNEIQNINKTSTAVEFFKNFGKGLEEEM 183
Query: 643 K-VYKSXRLRAGKGKMRNRRRIXRKGPLIIF 732
K + S +R GKGKMRNRRR+ GPL+++
Sbjct: 184 KRIESSIAIRCGKGKMRNRRRVCAVGPLVVY 214
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 209 bits (511), Expect = 5e-53
Identities = 102/208 (49%), Positives = 129/208 (62%), Gaps = 1/208 (0%)
Frame = +1
Query: 112 PLVSVYSEKSET-VQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTS 288
PLVSV+S T V PLP VF+ PIRPD+V+ VH +++KN RQ + V+ +AG Q S
Sbjct: 5 PLVSVFSADDSTKVTAKHIPLPAVFQTPIRPDIVSFVHTNIAKNRRQAHAVNPQAGMQHS 64
Query: 289 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXX 468
AESWGTGRAVARIPRV G GTHRSGQ AFGN CR GRM P K WRRWH
Sbjct: 65 AESWGTGRAVARIPRVSGSGTHRSGQAAFGNQCRKGRMSLPIKVWRRWHRRVNIKQKRHA 124
Query: 469 XXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKV 648
ARGH I ++P++PLVV DK++ KT A+ FL+R A+ D+ KV
Sbjct: 125 AATAVAATGIVPLVLARGHRISQVPQIPLVVEDKIESYEKTTDALNFLKRFGAFEDVQKV 184
Query: 649 YKSXRLRAGKGKMRNRRRIXRKGPLIIF 732
+ +RAG K R ++ RKGPL+++
Sbjct: 185 VSTKVVRAGISKQRGKKYRVRKGPLVVY 212
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 202 bits (493), Expect = 7e-51
Identities = 102/209 (48%), Positives = 129/209 (61%)
Frame = +1
Query: 109 RPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTS 288
RPL +VY + V G + +P VF+ PIR DL+ + +MSKN R PY V AG++TS
Sbjct: 5 RPLANVYGINGKKVVGEVE-IPVVFQTPIRHDLIEYIFSNMSKNIRHPYAVKLGAGYETS 63
Query: 289 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXX 468
AESWGTGRAVARIPRV GGGTHR+GQ AFGNMCRGG MF PTK WRRW
Sbjct: 64 AESWGTGRAVARIPRVPGGGTHRAGQAAFGNMCRGGGMFNPTKIWRRWGRKINLKEKRYA 123
Query: 469 XXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKV 648
ARGH I + E+PLV ++ ++ + KTK A+ FL L ++ ++
Sbjct: 124 VCSSIAASGITSLVLARGHRISNLKEVPLVASNDIESMQKTKDALKFLISLGLRDEVNRL 183
Query: 649 YKSXRLRAGKGKMRNRRRIXRKGPLIIFN 735
KS +LRA GKMRNR+ GPLII++
Sbjct: 184 IKSXKLRARXGKMRNRKYKISNGPLIIYS 212
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 194 bits (473), Expect = 2e-48
Identities = 99/210 (47%), Positives = 131/210 (62%), Gaps = 1/210 (0%)
Frame = +1
Query: 106 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQT 285
+RP V++Y + + LP VF APIR D+V+ V+ + SKN+RQP VS +AG Q
Sbjct: 3 SRPFVTIYDGITGEAEKTQVRLPAVFLAPIRGDVVHFVYRNQSKNTRQPEGVSTKAGKQH 62
Query: 286 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXX 465
SA SWGTGRAVARIPR+ G G+ R+GQGAFGNM R G MF+P K +R+W
Sbjct: 63 SAISWGTGRAVARIPRISGSGSGRNGQGAFGNMTRKGHMFSPLKNFRKWQRKTPKQMRRF 122
Query: 466 XXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADK-VQEINKTKQAVIFLRRLKAWSDIL 642
ARGH I +P++PLVV K + I KTKQAV L+++ A+SD+L
Sbjct: 123 AVASCIAASAVPALVSARGHHIAGVPQIPLVVNSKSISVIKKTKQAVYLLKKINAYSDVL 182
Query: 643 KVYKSXRLRAGKGKMRNRRRIXRKGPLIIF 732
KV S +RAG+GKMR R+ RKGPL+++
Sbjct: 183 KVIASKTVRAGQGKMRGRKIKERKGPLVVY 212
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 192 bits (469), Expect = 6e-48
Identities = 96/205 (46%), Positives = 124/205 (60%)
Frame = +1
Query: 115 LVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAE 294
L +VY+ + A P + +PIRPD+V+ VH++++KN RQP+ AGHQ SAE
Sbjct: 7 LTTVYNTDGKARDTTAVPSVIRY-SPIRPDVVHFVHMNLAKNERQPFGRYYLAGHQHSAE 65
Query: 295 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXX 474
SWGTGRAVAR+PR+ G GT R+GQ AF N RGG M++P K WRRWH
Sbjct: 66 SWGTGRAVARVPRISGSGTSRNGQAAFANSARGGHMYSPLKVWRRWHRMVNVTQRRFAMC 125
Query: 475 XXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYK 654
ARGH I+ +PELPLVV+D V++I KTK+AV L LKA D+ +
Sbjct: 126 SAIAASSNPSLVLARGHKIDNVPELPLVVSDDVEQIKKTKEAVKVLAALKASDDVKHSAE 185
Query: 655 SXRLRAGKGKMRNRRRIXRKGPLII 729
S R+R G GK RNRR R+G LI+
Sbjct: 186 SKRIRVGSGKARNRRYTQRRGVLIV 210
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 184 bits (448), Expect = 2e-45
Identities = 95/204 (46%), Positives = 116/204 (56%)
Frame = +1
Query: 118 VSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 297
++ Y TV+ LP VF PIR DLV + +RQPY VSK AG Q SAES
Sbjct: 5 INCYEADGVTVKKTLD-LPEVFSVPIRQDLVLKTYSLYRMKTRQPYAVSKNAGMQHSAES 63
Query: 298 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXX 477
WGTGRA+AR+PRV+GGGT R+GQGAF N CR GRM PTK RRW
Sbjct: 64 WGTGRAIARVPRVKGGGTRRAGQGAFANFCRKGRMAHPTKTHRRWARKVVENTKKIAEAM 123
Query: 478 XXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKS 657
+ARGH I + LP++V+D + + KTK AV LR L ++ +V KS
Sbjct: 124 AVAASAQASLVEARGHRISDVKMLPIIVSDDIAKARKTKDAVEILRNLNMTEELKRVEKS 183
Query: 658 XRLRAGKGKMRNRRRIXRKGPLII 729
+R GKGKMRNRR RKG LI+
Sbjct: 184 RGVRCGKGKMRNRRYTQRKGILIV 207
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 183 bits (446), Expect = 4e-45
Identities = 94/207 (45%), Positives = 124/207 (59%)
Frame = +1
Query: 109 RPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTS 288
RP VSV++ GA +P VF AP+R DLV VH +MSKN RQ Y VSK +G+QTS
Sbjct: 4 RPEVSVHNATDGERVGATL-MPKVFSAPLRLDLVRIVHTNMSKNRRQAYAVSKMSGYQTS 62
Query: 289 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXX 468
A SWGTGRA+AR+PRV+GGGTHR+GQ A+ N CR G M+APT+ WRRWH
Sbjct: 63 ARSWGTGRAMARVPRVKGGGTHRAGQAAYANFCRAGGMYAPTRVWRRWHRKVNLKEKRQA 122
Query: 469 XXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKV 648
+RGH IE + E+P+VV D +++INKTK AV L + +++ ++
Sbjct: 123 LASALAATAVVPVVMSRGHRIEALREVPMVVDDAIEQINKTKDAVKLLETIGLGAELKRI 182
Query: 649 YKSXRLRAGKGKMRNRRRIXRKGPLII 729
K G+ R+ R+ GPLII
Sbjct: 183 DKVT------GRARDGRKKRPVGPLII 203
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 182 bits (442), Expect = 1e-44
Identities = 87/194 (44%), Positives = 118/194 (60%)
Frame = +1
Query: 109 RPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTS 288
RP+VSV+S +E G+ +P VF P+R DLV+ VH +MSKN RQ Y +S+ +G+QTS
Sbjct: 4 RPVVSVFSVSTEKRMGSTI-MPRVFSTPLRSDLVHYVHTNMSKNKRQAYAISRMSGYQTS 62
Query: 289 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXX 468
A SWGTGRA++R PRV+GGGTHRSGQ A+ N CR G MFAPT+ WR WH
Sbjct: 63 ARSWGTGRALSRTPRVKGGGTHRSGQAAYANFCRAGGMFAPTRTWRHWHRKINLKEKRLA 122
Query: 469 XXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKV 648
+RGH +E +PELPLV+ D ++ + KT+ AV L + ++ +V
Sbjct: 123 LAVSVAATASVPLVMSRGHRVESVPELPLVLDDTMETLTKTRDAVELLNSMGLADELKRV 182
Query: 649 YKSXRLRAGKGKMR 690
+ R + KGK R
Sbjct: 183 SVTKRTKR-KGKKR 195
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 179 bits (435), Expect = 8e-44
Identities = 85/170 (50%), Positives = 105/170 (61%), Gaps = 3/170 (1%)
Frame = +1
Query: 235 KNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 414
++++ V +AGHQTSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPT
Sbjct: 22 ESTKDTLTVPNKAGHQTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPT 81
Query: 415 KPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKV---QEIN 585
K WR+WH ARGH + +PE+PLV++ I
Sbjct: 82 KVWRKWHQKINLNQKRFATASALAASGSPALLMARGHNVSTVPEVPLVISSTAFADAAIR 141
Query: 586 KTKQAVIFLRRLKAWSDILKVYKSXRLRAGKGKMRNRRRIXRKGPLIIFN 735
KT AV L+ + A +D K S +LRAGKGK+R RR R+GPL+I+N
Sbjct: 142 KTSAAVALLKAVGAGADCEKAKNSRKLRAGKGKLRGRRHKQRRGPLVIYN 191
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 174 bits (423), Expect = 2e-42
Identities = 85/188 (45%), Positives = 112/188 (59%)
Frame = +1
Query: 169 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 348
+P VF + IR D+V VH +M KN RQ Y VS AG TSA SWGTGRAV+R+PRV G G
Sbjct: 19 IPKVFFSKIRVDIVRFVHKNMCKNKRQVYAVSSTAGMGTSAVSWGTGRAVSRVPRVPGSG 78
Query: 349 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 528
THRSGQGA N CRGGR+F PT WR+WH +RG+
Sbjct: 79 THRSGQGAIANFCRGGRIFNPTTIWRKWHHKINKNQRKSAIFSAIASSSIVSIIVSRGYR 138
Query: 529 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSXRLRAGKGKMRNRRRIX 708
++ IPE+P V+ D +++I KT+ + L L + I++ +L++GKGKMRNRR
Sbjct: 139 VKTIPEIPFVIEDSIEKIPKTRDLIKILTTL-GINSIVRNKLKRKLKSGKGKMRNRRFKK 197
Query: 709 RKGPLIIF 732
GPL++F
Sbjct: 198 PTGPLLVF 205
>UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia
malayi (Filarial nematode worm)
Length = 306
Score = 172 bits (419), Expect = 7e-42
Identities = 79/104 (75%), Positives = 88/104 (84%)
Frame = +1
Query: 124 VYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWG 303
VY++KSE + LP VF+AP+RPD+V+ VH + KN RQPY VS EAGHQTSAESWG
Sbjct: 127 VYNDKSEPTDTQIR-LPGVFRAPLRPDIVSFVHDQIRKNKRQPYAVSVEAGHQTSAESWG 185
Query: 304 TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 435
TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 186 TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKVFRRWH 229
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 165 bits (401), Expect = 1e-39
Identities = 80/210 (38%), Positives = 122/210 (58%)
Frame = +1
Query: 106 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQT 285
+R V+V +++ + + + LP VF PIR ++V +V+V+++KN++QP+ AG +
Sbjct: 2 SRQTVNVLTQEGQ--KASTIELPKVFDTPIRAEVVKEVYVNLAKNAQQPHANDPMAGKKV 59
Query: 286 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXX 465
SA SWGTGRA A +PRV G G++R+GQGA+ N CRGG F P RRW
Sbjct: 60 SAISWGTGRAKACVPRVNGSGSNRNGQGAYANFCRGGHRFNPPTLLRRWFRPVPSRQRKF 119
Query: 466 XXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILK 645
QARGH++ ++ E+P+VV D VQEI +T+ AV L+++ + D+ +
Sbjct: 120 AIASAIAATAVVPLVQARGHVLGEVKEVPIVVVDAVQEIKRTRDAVELLKKVGVYGDVQR 179
Query: 646 VYKSXRLRAGKGKMRNRRRIXRKGPLIIFN 735
V R+ KGK R +KGPL+I+N
Sbjct: 180 VLDGSVHRSSKGKFRRAAYKTKKGPLVIYN 209
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 156 bits (378), Expect = 6e-37
Identities = 85/208 (40%), Positives = 108/208 (51%)
Frame = +1
Query: 112 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSA 291
P V V+ V A P P VF P+RPD++N VH + K R PY VS+ AG Q +A
Sbjct: 3 PTVKVFGPTGTQV--AELPRPKVFNVPLRPDIINFVHTQLRKCLRTPYAVSRYAGVQCTA 60
Query: 292 ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXX 471
SWG GRAVAR+PR G G GA+ N RGG M PT RRW
Sbjct: 61 HSWGPGRAVARLPRKHG------GIGAYANFARGGHMAHPTTVIRRWCRKVNLNQRRYAV 114
Query: 472 XXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVY 651
+ARGH I +P +PLVV + KTK A+ ++ + D+ +
Sbjct: 115 ASALAASANAALVEARGHRIADVPSIPLVV--DTDNVTKTKDALAIIKAVGVLRDVERCK 172
Query: 652 KSXRLRAGKGKMRNRRRIXRKGPLIIFN 735
S +RAG+GKMRNRR I RKGPL+I+N
Sbjct: 173 DSRHIRAGRGKMRNRRYITRKGPLVIYN 200
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 130 bits (315), Expect = 3e-29
Identities = 57/73 (78%), Positives = 69/73 (94%)
Frame = +1
Query: 517 RGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSXRLRAGKGKMRNR 696
RG++++ + E+PLVV+DK+QEINKTKQAVIFLRR+KAWSD+LKVYKS RLRAGKGKMRNR
Sbjct: 5 RGYVVDNVSEIPLVVSDKIQEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNR 64
Query: 697 RRIXRKGPLIIFN 735
RR+ RKGPLII+N
Sbjct: 65 RRLHRKGPLIIYN 77
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 129 bits (312), Expect = 6e-29
Identities = 69/207 (33%), Positives = 107/207 (51%), Gaps = 1/207 (0%)
Frame = +1
Query: 112 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSA 291
P+ ++ E+ +TV+ LP F+ P+R DL+ ++ N RQPY AG +TSA
Sbjct: 4 PVFNLEGEEVDTVE-----LPSFFEEPVRKDLIRRAVLAAQANRRQPYGTDPRAGFRTSA 58
Query: 292 ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG-RMFAPTKPWRRWHXXXXXXXXXXX 468
ESWG G VA +PRV+G +G+ A GG + APT P + W
Sbjct: 59 ESWGAGHGVAMVPRVKGRRHPAAGRAARVAQAVGGQKAHAPT-PEKDWTQRVNRKERRAA 117
Query: 469 XXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKV 648
+ RGH+I+ +P LP+VV D+++ +NK ++ F + + W+D+ +
Sbjct: 118 LRSALAATAKPEFVKERGHVIDDVPHLPVVVVDELKSLNKAREVREFFKSVGLWADVERA 177
Query: 649 YKSXRLRAGKGKMRNRRRIXRKGPLII 729
+ R+RAGKGK R RR + K LI+
Sbjct: 178 KSNRRIRAGKGKRRGRRYVKPKSVLIV 204
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 117 bits (282), Expect = 3e-25
Identities = 65/186 (34%), Positives = 90/186 (48%)
Frame = +1
Query: 172 PFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGT 351
P F PIRPDL+ ++S QP V + AG + S ES+G G +ARIPR +G
Sbjct: 45 PLHFLEPIRPDLIRRAYLSALSARFQPKGVYEGAGKEHSCESFGVGLGIARIPRYKGSLW 104
Query: 352 HRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHII 531
R G F RGGR P K ++ H ARGH++
Sbjct: 105 PR---GCFAPNTRGGRRAHPPKVEKKLHEEINKKEKKLAIRSAIAATAYRSWVAARGHVV 161
Query: 532 EKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSXRLRAGKGKMRNRRRIXR 711
EK+P LP+VV ++IN+ K+A L W D+ + + ++RAGKGKMR RR
Sbjct: 162 EKVPSLPVVVVGDAEKINRAKEAKKLFEALGLWPDVERAAEGVKIRAGKGKMRGRRYKEP 221
Query: 712 KGPLII 729
K L++
Sbjct: 222 KSVLVV 227
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 107 bits (257), Expect = 3e-22
Identities = 68/203 (33%), Positives = 95/203 (46%), Gaps = 9/203 (4%)
Frame = +1
Query: 154 GAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPR 333
GA+ +P VF +PIR D+VN VH ++KN + + + A PR
Sbjct: 15 GASCAMPEVFLSPIRADIVNAVHTGLAKNDSTTDEIQLCFLLDSQGKRTPCTDVPATKPR 74
Query: 334 VRGGGTHRSGQGAFGNMCRGGRMFAPTK---------PWRRWHXXXXXXXXXXXXXXXXX 486
G + +CR AP K WRRWH
Sbjct: 75 PSPGAP--VARSLVFRVCRAVVPTAPVKGRSVTCAAVTWRRWHRRVNIKEKRYAVCSAIA 132
Query: 487 XXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSXRL 666
ARGH +E +PE+PLVV D I KT +AV L++L A++DI KV S +
Sbjct: 133 ASAVPSLLLARGHRVEGVPEVPLVVDDSASSIKKTAKAVELLKQLGAYADIEKVKASRNV 192
Query: 667 RAGKGKMRNRRRIXRKGPLIIFN 735
R+GKGKMRNRR + R+GPL++++
Sbjct: 193 RSGKGKMRNRRYVQRRGPLVVYS 215
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 107 bits (257), Expect = 3e-22
Identities = 58/204 (28%), Positives = 100/204 (49%)
Frame = +1
Query: 118 VSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 297
++VYS K + + LP +F+ RPD++ +SM QP+ AG +T+AES
Sbjct: 4 INVYSLKGDITEEIE--LPEIFEEEYRPDVIKRAVISMQTARIQPWGTDPMAGKRTTAES 61
Query: 298 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXX 477
+G+GR A +PRV+G S + AF GGR P + +H
Sbjct: 62 FGSGRGAAMVPRVKG-----SSKAAFVPQAIGGRKAHPPRVNTIYHEKINKKERTLAIRS 116
Query: 478 XXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKS 657
+ RGH + ++ ++P V+ D+++ + TK+ + L DI++ K
Sbjct: 117 AIAATANKELVEQRGHQVSELEQIPFVIDDEIETVKTTKETREIFKDLGIMDDIVRAKKG 176
Query: 658 XRLRAGKGKMRNRRRIXRKGPLII 729
++++GKGK+R R+ KGPL++
Sbjct: 177 RKIKSGKGKLRGRKYRTPKGPLVV 200
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 104 bits (249), Expect = 3e-21
Identities = 59/187 (31%), Positives = 90/187 (48%)
Frame = +1
Query: 169 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 348
LP +F P+R DL+ V ++ +S QP AG +TSAES+G +AR+PRV+
Sbjct: 25 LPIIFSFPVRKDLIRRVFIAEFTHSLQPKGRDPNAGKRTSAESFGINLGMARVPRVKN-- 82
Query: 349 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 528
SG+ A GGR+ P ++ +ARGH+
Sbjct: 83 ---SGEAALAPNTVGGRLAFPPSVNKKLAEEANVKEKRLAVISALSATADIAFVRARGHV 139
Query: 529 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSXRLRAGKGKMRNRRRIX 708
+ P+VV D + + T + FL+++ + D+ +V + R+RAGKGKMR R+
Sbjct: 140 FKDSVRFPIVVTDDIVNLKTTSEVEEFLKKIGVYDDVERVKERIRIRAGKGKMRGRKYKE 199
Query: 709 RKGPLII 729
GPLII
Sbjct: 200 PIGPLII 206
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 95.5 bits (227), Expect = 1e-18
Identities = 54/187 (28%), Positives = 87/187 (46%)
Frame = +1
Query: 169 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 348
LP VF RPD++ +++ + RQPY + +G S E+WG G AR+PR + G
Sbjct: 18 LPEVFAEEFRPDIIKRAVLALQSHRRQPYGPNPLSGVDYSWENWGPGHGYARVPRWKLGR 77
Query: 349 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 528
+ GGR P KP R+W + R H+
Sbjct: 78 -----RAVVVPQAVGGRRAHPPKPERKWAEKINKKEMRKALKSAIAATANEELVRQRSHV 132
Query: 529 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSXRLRAGKGKMRNRRRIX 708
E ELP VV+++++ + +TK R + ++D+ + + R RAG+GKMR RR +
Sbjct: 133 FEG--ELPKVVSNELESVKRTKDVAEVFRAIGVYADVERAKERKRYRAGRGKMRGRRYVK 190
Query: 709 RKGPLII 729
+K L++
Sbjct: 191 KKSVLLV 197
>UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L4A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 278
Score = 92.7 bits (220), Expect = 9e-18
Identities = 47/153 (30%), Positives = 75/153 (49%)
Frame = +1
Query: 271 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 450
+G+Q SA+SWG GR +ARIPR++G GT ++GQGA NMCRGGR+F ++W+
Sbjct: 59 SGNQVSAKSWGPGRGLARIPRIKGSGTRKAGQGALANMCRGGRLFGNRNYSKKWNIKTNR 118
Query: 451 XXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAW 630
+RGH ++ + P+++ ++ I + ++ L+ +
Sbjct: 119 KVKVSAFKTALLSTLFETLVVSRGHSLKDVKNFPMIIDSILKYIWHPSELLMLLKLYGGY 178
Query: 631 SDILKVYKSXRLRAGKGKMRNRRRIXRKGPLII 729
SD K S A + K + GPLII
Sbjct: 179 SDFKKAMIS---HAKRKKHLASSNTCKNGPLII 208
>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 253
Score = 86.2 bits (204), Expect = 7e-16
Identities = 38/60 (63%), Positives = 50/60 (83%)
Frame = +1
Query: 514 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSXRLRAGKGKMRN 693
++GH I ++PELPLVV DKV+ KT++AV+ L++LKAW+DI KVY S R+RAGKGKMRN
Sbjct: 2 SKGHRIGEVPELPLVVEDKVEGYKKTEEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRN 61
>UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L4P -
Thermoplasma acidophilum
Length = 255
Score = 85.0 bits (201), Expect = 2e-15
Identities = 59/204 (28%), Positives = 92/204 (45%)
Frame = +1
Query: 118 VSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 297
V +YS E ++G LP VF +R D++ ++S + RQPY S AG + +
Sbjct: 5 VPIYSVSGE-MKGEID-LPEVFDTEVREDIIRRAFRAISLSMRQPYGSSPLAGMRRVGHT 62
Query: 298 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXX 477
G ++R+PR+ GG A G G+ + + +
Sbjct: 63 TRPGLGISRMPRIAGGSRVVGIASAVG-----GKSAHSPRTTKNLYVKINDRERKMAKYS 117
Query: 478 XXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKS 657
+ RGH ++ +LP+VV D V+ INKTK A+ L+ L + DI + +
Sbjct: 118 AIALTASVEAVKKRGHRFKEGLKLPIVVEDGVEGINKTKDAIALLKNLGVYEDIERSREG 177
Query: 658 XRLRAGKGKMRNRRRIXRKGPLII 729
+RAG+GKMR RR K LI+
Sbjct: 178 KHIRAGRGKMRGRRYKQPKSVLIV 201
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 85.0 bits (201), Expect = 2e-15
Identities = 62/206 (30%), Positives = 89/206 (43%), Gaps = 1/206 (0%)
Frame = +1
Query: 115 LVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAE 294
+V VY E+ LP +F+ P+R DL+ +S QP AG +TSA
Sbjct: 15 IVPVYDERGGEKDSVV--LPQIFRFPVRKDLIRRAFLSEFTARLQPKGRDPMAGKRTSAV 72
Query: 295 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXX 474
S G GR VAR+PR++G S + A NM RGGR P + +
Sbjct: 73 SLGVGRGVARVPRIKG-----SLRAALVNMARGGRAAHPPRVEKVLKEYINKKEKRLATI 127
Query: 475 XXXXXXXXXXXXQARGHIIEKIPELPLVVADKV-QEINKTKQAVIFLRRLKAWSDILKVY 651
+ RGH LP+V+ V +I+ ++A L + + D+L+
Sbjct: 128 SAISATSREDLVRQRGHRF-SAETLPIVLDSSVLAKISTAREARSLLESVGVYEDVLRAK 186
Query: 652 KSXRLRAGKGKMRNRRRIXRKGPLII 729
+ R AGKGKMR RR K L +
Sbjct: 187 EGKRYNAGKGKMRGRRYKVPKSVLFV 212
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 83.8 bits (198), Expect = 4e-15
Identities = 56/195 (28%), Positives = 85/195 (43%), Gaps = 2/195 (1%)
Frame = +1
Query: 151 QGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWG--TGRAVAR 324
+G LP VF P R DL+ + + + QP AG SA+S TG AR
Sbjct: 12 KGKEITLPPVFGTPYRRDLIKKAYTILDTHHFQPKGTHPTAGMDVSADSLNPPTGHGQAR 71
Query: 325 IPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXX 504
I R++GGG R G+ RGGR P K + H
Sbjct: 72 IARMKGGGGRRRGEAGEVASIRGGRQAHPPKVQKVIHKKINKKEKKLALCSAIAATASKS 131
Query: 505 XXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSXRLRAGKGK 684
RGHII+ I ELP+V++D ++ ++K + L L ++D+ ++ + + R GK
Sbjct: 132 TVAGRGHIIDGI-ELPIVISDDIESVSKASEVRKILSALGLFADVNRL-EGRKPRTGKSA 189
Query: 685 MRNRRRIXRKGPLII 729
+R R + K L +
Sbjct: 190 LRGRPKKIGKSILFV 204
>UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_974, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 386
Score = 82.2 bits (194), Expect = 1e-14
Identities = 37/73 (50%), Positives = 48/73 (65%)
Frame = +1
Query: 514 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSXRLRAGKGKMRN 693
ARGH IE +PELPLV+ D + + KT A+ L++ A+ D K S + GKGKMRN
Sbjct: 2 ARGHRIESVPELPLVIGDSAESVEKTSAAIDILKQFDAYLDTEKAKDSHAIHPGKGKMRN 61
Query: 694 RRRIXRKGPLIIF 732
RR I RKGPLI++
Sbjct: 62 RRYISRKGPLIVY 74
>UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L4P -
Nanoarchaeum equitans
Length = 268
Score = 81.0 bits (191), Expect = 3e-14
Identities = 64/200 (32%), Positives = 92/200 (46%), Gaps = 11/200 (5%)
Frame = +1
Query: 169 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSA------ESWGT--GRAVAR 324
LP F IR D++ +++ + RQPY S AG Q SA SW T GR ++R
Sbjct: 18 LPPQFNEKIRFDVIKRAFLAIQSHKRQPYGASPIAGKQHSAWTSKRRRSWRTSYGRGISR 77
Query: 325 IPRV---RGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXX 495
+ R R G +G + P K + W+
Sbjct: 78 VSRAILRRHGALFYWVARNIAQAVKGKKAHPP-KAEKDWYEKINKKERRLAIRSALAATK 136
Query: 496 XXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSXRLRAG 675
+ARGHII+K +P+VV D ++++ KTK+ L +L ++ +VY+ R RAG
Sbjct: 137 ELDLVKARGHIIDK--PVPIVV-DGLEQLRKTKEIQQLLLKLGLEKELERVYEIKR-RAG 192
Query: 676 KGKMRNRRRIXRKGPLIIFN 735
KGK R R I RKGPLI+ N
Sbjct: 193 KGKRRGRAYIERKGPLIVVN 212
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 77.4 bits (182), Expect = 3e-13
Identities = 35/56 (62%), Positives = 44/56 (78%)
Frame = +1
Query: 568 KVQEINKTKQAVIFLRRLKAWSDILKVYKSXRLRAGKGKMRNRRRIXRKGPLIIFN 735
KV+ KTK+ V+ L++LKAW+DI KVY S R+RAGKGKMRNRR I R+G II+N
Sbjct: 98 KVEGYKKTKEEVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRPIQRRGSCIIYN 153
Score = 74.5 bits (175), Expect = 2e-12
Identities = 33/49 (67%), Positives = 39/49 (79%)
Frame = +1
Query: 202 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 348
D+VN VH ++ KN QPY VS+ AG+QTSAESWGTGRA +PRVRGGG
Sbjct: 25 DVVNFVHSNLHKNDSQPYAVSESAGYQTSAESWGTGRARGPMPRVRGGG 73
>UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarcula
marismortui|Rep: 50S ribosomal protein L4P - Haloarcula
marismortui (Halobacterium marismortui)
Length = 246
Score = 68.9 bits (161), Expect = 1e-10
Identities = 49/177 (27%), Positives = 79/177 (44%)
Frame = +1
Query: 169 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 348
LP VF+ P+R DL+ + N +Q Y + AG +T AES+G+GR A +P+ + G
Sbjct: 18 LPDVFETPVRSDLIGKAVRAAQANRKQDYGSDEYAGLRTPAESFGSGRGQAHVPK-QDGR 76
Query: 349 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 528
R Q GR P K + RGH
Sbjct: 77 ARRVPQAV------KGRSAHPPKTEKDRSLDLNDKERQLAVRSALAATADADLVADRGHE 130
Query: 529 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSXRLRAGKGKMRNRR 699
++ E+P+VV+D +++ KT++ V L L +DI + +++AG+G R R+
Sbjct: 131 FDR-DEVPVVVSDDFEDLVKTQEVVSLLEALDVHADIDRA-DETKIKAGQGSARGRK 185
>UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular
organisms|Rep: Ribosomal protein L4 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 304
Score = 55.6 bits (128), Expect = 1e-06
Identities = 56/218 (25%), Positives = 80/218 (36%), Gaps = 22/218 (10%)
Frame = +1
Query: 142 ETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK-------EAGHQTSAESW 300
E G A LP VF IR DL+ ++ N RQ Y + +AG + S E W
Sbjct: 41 EAKNGKAVTLPDVFSGEIREDLIRRAVLASRANRRQSYGHREHDGKRKPQAGMKHSVEWW 100
Query: 301 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXX 480
G GR V+RI R G T A RGGR K + W
Sbjct: 101 GKGRGVSRIMRKAGQRT-----AAQNPHTRGGRRAHGPKVDKDWSQKINSKENRIARDSA 155
Query: 481 XXXXXXXXXXQARGHIIEKIPELPLVV---------ADKVQEIN------KTKQAVIFLR 615
RGH E P+++ D+ ++ T++ V +
Sbjct: 156 IAASASSNLVSERGHHFEASLRFPIIIDGYVESREGGDEKYDLESLPLQYSTRKFVAMME 215
Query: 616 RLKAWSDILKVYKSXRLRAGKGKMRNRRRIXRKGPLII 729
L +D+ + +RAGKG MR R+ K L++
Sbjct: 216 GLGLGADLDRARTGRTIRAGKGTMRGRKYRTPKSILLV 253
>UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium
caudatum|Rep: Ribosomal protein L4 - Paramecium caudatum
Length = 252
Score = 55.2 bits (127), Expect = 2e-06
Identities = 24/58 (41%), Positives = 37/58 (63%)
Frame = +1
Query: 559 VADKVQEINKTKQAVIFLRRLKAWSDILKVYKSXRLRAGKGKMRNRRRIXRKGPLIIF 732
V DK++ KTK A+ FL+R A+ D+ KV + +RAG K R ++ RKGPL+++
Sbjct: 1 VEDKIESYEKTKDALNFLKRFGAFEDVQKVVSTKTIRAGVSKSRGKKYRVRKGPLVVY 58
>UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 534
Score = 49.2 bits (112), Expect = 1e-04
Identities = 42/130 (32%), Positives = 56/130 (43%), Gaps = 2/130 (1%)
Frame = +3
Query: 345 WYP*VRSGCLR*HVSWWTYVRPHEALAALAPSRQPPTAESGLGSSRCCYRRPSARSG*RT 524
W VR C+R HV WW +VR E L LAP QP A L C R A +G
Sbjct: 134 WNEHVRRRCVRQHVPWWPHVRADEDLPPLAPQDQP--APEALRCGVCARRVVCAVAGDVA 191
Query: 525 HY*KDSRA--SLGCS*QSPGDQQDQTGCHLPEAPQGMV*YP*GVQVSXSSCW*G*NAQPS 698
RA + G PG ++D+ G +PE + +++ CW +AQP
Sbjct: 192 RPPDRQRAGGAAGGGGLDPGLREDEGGYGVPEGDRCDRRREPRERLARDPCWPRQDAQP- 250
Query: 699 SYPX*GAPHN 728
P GAP +
Sbjct: 251 --PLRGAPRS 258
>UniRef50_A7QKL2 Cluster: Chromosome chr2 scaffold_113, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr2 scaffold_113, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 145
Score = 41.9 bits (94), Expect = 0.016
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +1
Query: 514 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILK 645
ARGH IE + ELPLV+ D + ++KT + L+++ A D+ K
Sbjct: 24 ARGHRIESVLELPLVIGDSTKSVDKTSTTIDILKQVGACPDVEK 67
>UniRef50_A7Q400 Cluster: Chromosome chr13 scaffold_48, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr13 scaffold_48, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 131
Score = 37.9 bits (84), Expect = 0.26
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = -1
Query: 413 VGANIRPPRHMLPKAP*P 360
VGANI PPRHMLPKAP P
Sbjct: 107 VGANILPPRHMLPKAPWP 124
>UniRef50_Q9UFE2 Cluster: Putative uncharacterized protein
DKFZp434E026; n=1; Homo sapiens|Rep: Putative
uncharacterized protein DKFZp434E026 - Homo sapiens
(Human)
Length = 158
Score = 36.3 bits (80), Expect = 0.78
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = -3
Query: 516 SLNERWDAGSSNGCCQGRSPLSEVDATVPAPPGL 415
+L +W S+G C G SPLS A PAPPGL
Sbjct: 106 ALPGKWHLLLSSGLCGGNSPLSGNGAVCPAPPGL 139
>UniRef50_Q9VDD2 Cluster: CG17299-PF, isoform F; n=18; Diptera|Rep:
CG17299-PF, isoform F - Drosophila melanogaster (Fruit
fly)
Length = 1400
Score = 35.9 bits (79), Expect = 1.0
Identities = 29/88 (32%), Positives = 35/88 (39%), Gaps = 2/88 (2%)
Frame = +1
Query: 145 TVQGAAKP--LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAV 318
TV G A P P +F RP +D K+ P A T + S GTG A
Sbjct: 670 TVHGIASPNRRPTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPAT 728
Query: 319 ARIPRVRGGGTHRSGQGAFGNMCRGGRM 402
+ GG +GQGA G GG M
Sbjct: 729 SSAAGGAGGAAAAAGQGAAGG--AGGLM 754
>UniRef50_Q5NB71 Cluster: Putative uncharacterized protein
P0431F01.18; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0431F01.18 - Oryza sativa subsp. japonica (Rice)
Length = 320
Score = 35.5 bits (78), Expect = 1.4
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +1
Query: 319 ARIPRVRGGGTHRSGQGAFGNMCRGG 396
AR PR GGG HR GA G + RGG
Sbjct: 201 ARRPRAAGGGKHRGAHGANGGVARGG 226
>UniRef50_UPI0000F2E379 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 384
Score = 34.7 bits (76), Expect = 2.4
Identities = 24/69 (34%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Frame = -2
Query: 262 SRSKAASSSWT*KREHH*PGPDVWAP*TRTGGAWLHP--APSRSSLNTPTLKVGLPIDSF 89
S+ K ++S T + P VW P T G W P AP R S TP G P+ S
Sbjct: 77 SKEKRGATSRTCYQTLRGPQRAVWEPGKATAGCWGPPRAAPGRESTGTPCRDPGDPLRSH 136
Query: 88 RYFSEAXPP 62
R PP
Sbjct: 137 RAPLHEWPP 145
>UniRef50_A2QMQ0 Cluster: Contig An07c0080, complete genome; n=11;
Pezizomycotina|Rep: Contig An07c0080, complete genome -
Aspergillus niger
Length = 598
Score = 34.3 bits (75), Expect = 3.2
Identities = 20/72 (27%), Positives = 32/72 (44%)
Frame = -3
Query: 645 LKDIRPCLEAPQEDDSLFGLVDLLDFVSYNQGKLGNLFNNVSSSLNERWDAGSSNGCCQG 466
++ + PC+ A D F L L+F S N + F+ ++ +E G++NG QG
Sbjct: 282 IQSVDPCISAQVAQDHTFAL---LEFKSPNDATVALAFDGIAMEEHEAAGNGAANGAAQG 338
Query: 465 RSPLSEVDATVP 430
D VP
Sbjct: 339 LEVRRPKDYIVP 350
>UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 150
Score = 33.9 bits (74), Expect = 4.2
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +1
Query: 289 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 399
A+SW TGRA A + R R GG R A N G R
Sbjct: 36 AQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>UniRef50_A2X658 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 411
Score = 33.9 bits (74), Expect = 4.2
Identities = 21/50 (42%), Positives = 26/50 (52%)
Frame = +3
Query: 117 SVGVFREERDGAGCSQAPPVRVQGAHTSGPGQ*CSRFYVQELEAALLREQ 266
SVG E RDGAG + PP + A + Q VQELEA L +E+
Sbjct: 211 SVGEDEETRDGAGHDEPPPAPAEPASEAALAQ-AQLAQVQELEAKLQQER 259
>UniRef50_Q6PEV8 Cluster: Uncharacterized protein CXorf39; n=19;
Euteleostomi|Rep: Uncharacterized protein CXorf39 - Homo
sapiens (Human)
Length = 388
Score = 33.9 bits (74), Expect = 4.2
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 8/73 (10%)
Frame = -3
Query: 609 EDDSLFGLVDLLDFVSYNQGKLGNLFNNVSSSLNERWDAGSS--------NGCCQGRSPL 454
+ D + L+D DF S++ G++ ++VSSS++ WD S + G L
Sbjct: 93 DQDDCYSLLDDQDFTSFDLFPEGSVCSDVSSSISTYWDWSDSEFEWQLPGSDIASGSDVL 152
Query: 453 SEVDATVPAPPGL 415
S+V ++P+ P L
Sbjct: 153 SDVIPSIPSSPCL 165
>UniRef50_Q4RK83 Cluster: Chromosome 2 SCAF15032, whole genome
shotgun sequence; n=2; Clupeocephala|Rep: Chromosome 2
SCAF15032, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 386
Score = 33.5 bits (73), Expect = 5.5
Identities = 22/45 (48%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +3
Query: 390 WWTYVRPHEA---LAALAPSRQPPTAE-SGLGSSRCCYRRPSARS 512
WWT RPH +A AP R P T SGLGS YRRP R+
Sbjct: 306 WWT--RPHRRGTRPSARAPPRVPATPPPSGLGSGCYGYRRPLGRT 348
>UniRef50_Q52PH1 Cluster: Golden2-like transcription factor; n=8;
Poaceae|Rep: Golden2-like transcription factor - Zea
mays (Maize)
Length = 469
Score = 33.5 bits (73), Expect = 5.5
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -1
Query: 392 PRHMLPKAP*PDLWVPPPR 336
PRH+ P+AP P W PPP+
Sbjct: 325 PRHLAPRAPPPPPWAPPPQ 343
>UniRef50_A3UKR0 Cluster: Probable C-5 cytosine-specific DNA
methylase; n=1; Oceanicaulis alexandrii HTCC2633|Rep:
Probable C-5 cytosine-specific DNA methylase -
Oceanicaulis alexandrii HTCC2633
Length = 681
Score = 32.7 bits (71), Expect = 9.7
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Frame = +1
Query: 154 GAAKPLPFVFKAPIRPDLVNDVHVS----MSKNSRQPYCVSKEAGHQTSAESWGTGRAVA 321
G + F++K P +PD + HV+ +N+ +P+ + E H +A G A
Sbjct: 427 GEEDNVTFLYKHPAQPDALQVAHVAPHIMTMRNAGKPFTAANEPTHTVTAGGAGLSLVAA 486
Query: 322 RIPRVRGGGTHRSGQG 369
+ + GG S G
Sbjct: 487 FMAQHNGGANMESHAG 502
>UniRef50_A1HES9 Cluster: Putative uncharacterized protein; n=1;
Ralstonia pickettii 12J|Rep: Putative uncharacterized
protein - Ralstonia pickettii 12J
Length = 453
Score = 32.7 bits (71), Expect = 9.7
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 235 KNSRQPYCVSKEAGH-QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMC-RGGRM 402
+N+ P V+KEAGH Q +A G V R+ + GTH G+G GN RGG +
Sbjct: 49 ENAHGPQHVAKEAGHLQAAAFGNGLDHQVGRVADI-SVGTHEHGRG--GNRAQRGGAL 103
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 711,960,591
Number of Sequences: 1657284
Number of extensions: 14686614
Number of successful extensions: 46954
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 44418
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46884
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60088620670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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