Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_E06
         (637 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    24   0.92 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   2.1  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    22   4.9  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   8.6  

>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 24.2 bits (50), Expect = 0.92
 Identities = 17/68 (25%), Positives = 30/68 (44%)
 Frame = -2

Query: 474 EIWESWIDTLVTPASSIASMLPRSPTWRTAELGPP*SCFSGLK*APADVQPFVLSPNSCT 295
           EIW+S   +L   +S  ++   R+P    A++       + +    A   PF+L+    T
Sbjct: 229 EIWQSSESSLRPRSSQKSAPGKRTPLISRAKINTVKQTIAVIVMYIACSTPFILAQLWAT 288

Query: 294 WKPCLPLV 271
           W P  P +
Sbjct: 289 WDPQSPFI 296


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 30  HCHSLIGLCQSCASVRGFSCQ 92
           +C + I LC S   + G +CQ
Sbjct: 57  NCQNRINLCDSSPCLNGATCQ 77



 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 466 PDLSSWT*QHHWSHFSCPC 522
           P L+  T Q H +H++C C
Sbjct: 69  PCLNGATCQDHTTHYTCHC 87


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 6/21 (28%), Positives = 11/21 (52%)
 Frame = -3

Query: 593 QYDHQHYQWSYLAHCHRVPSH 531
           Q+++  + W+   H H   SH
Sbjct: 278 QHEYNSFNWTANGHGHNTSSH 298


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/39 (23%), Positives = 21/39 (53%)
 Frame = +3

Query: 177 FAYFVVMLAELFSSISRMKSHLLLFLERSRA*LRVNTVS 293
           FA  ++++  L  +     +H+L ++ ++     VNTV+
Sbjct: 360 FAKLLILVVSLSGTFGFFGTHILSYINKASFKKIVNTVA 398


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,308
Number of Sequences: 336
Number of extensions: 3105
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)