Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_E04
(632 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF036702-9|AAR85906.1| 111|Caenorhabditis elegans Hypothetical ... 76 2e-14
U64844-14|AAO25986.1| 375|Caenorhabditis elegans Hypothetical p... 30 1.6
U64844-13|AAD56301.1| 453|Caenorhabditis elegans Hypothetical p... 30 1.6
U23528-2|AAK31387.1| 984|Caenorhabditis elegans Calsyntenin/alc... 29 2.1
AY091591-1|AAM00045.1| 984|Caenorhabditis elegans calsyntenin p... 29 2.1
U43282-3|AAA83614.3| 499|Caenorhabditis elegans Glutamate trans... 29 3.7
AY125085-1|AAM94369.1| 1113|Caenorhabditis elegans regulatory cy... 28 4.8
AF024497-5|AAO21477.1| 871|Caenorhabditis elegans Defective in ... 28 4.8
AF024497-4|AAO21479.1| 807|Caenorhabditis elegans Defective in ... 28 4.8
AF024497-3|AAO21478.1| 1036|Caenorhabditis elegans Defective in ... 28 4.8
AF024497-2|AAB70342.2| 1113|Caenorhabditis elegans Defective in ... 28 4.8
U67952-1|AAB07577.2| 414|Caenorhabditis elegans Hypothetical pr... 28 6.4
U20862-3|AAN65283.1| 137|Caenorhabditis elegans Hypothetical pr... 28 6.4
U20862-2|AAK29864.1| 179|Caenorhabditis elegans Hypothetical pr... 28 6.4
AF248541-1|AAF63761.1| 179|Caenorhabditis elegans cysteine-rich... 28 6.4
Z99277-6|CAB16484.1| 677|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z66562-6|CAA91463.1| 1266|Caenorhabditis elegans Hypothetical pr... 27 8.4
U39472-10|AAZ82853.1| 354|Caenorhabditis elegans Serpentine rec... 27 8.4
AC006615-3|AAK68232.1| 1148|Caenorhabditis elegans Hypothetical ... 27 8.4
AC006615-2|AAK68231.1| 1121|Caenorhabditis elegans Hypothetical ... 27 8.4
>AF036702-9|AAR85906.1| 111|Caenorhabditis elegans Hypothetical
protein F33D4.7 protein.
Length = 111
Score = 76.2 bits (179), Expect = 2e-14
Identities = 39/102 (38%), Positives = 53/102 (51%)
Frame = +2
Query: 44 KENKPEPVAYSEAALRNNAVVVEYCRTSMAALSGSTAGVLGLTGLNGFAFYVFAVVMLWI 223
K K Y+ AA+ NN +E+ RT + +G AG+LGLTG GF Y +V + +
Sbjct: 7 KAEKKNDECYNTAAITNNVEALEFGRTCQSCAAGMAAGILGLTGFQGFILYFISVGIQAV 66
Query: 224 MFLVKVGPHWSKYFITRQSVLTNGFFGALFTYVLFWTFIYGM 349
++ VK +W YF R S T L T+VL W F YGM
Sbjct: 67 IWNVKSQGNWLSYFPERNS-FTWSHGNGLLTFVLLWVFFYGM 107
>U64844-14|AAO25986.1| 375|Caenorhabditis elegans Hypothetical
protein T22F3.11b protein.
Length = 375
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = +1
Query: 118 SYFYGCIVRIHCRCSWSHWAQWLCI--LRVCSCNALDNVLSQSWTTLEQVF-YNQTECSD 288
+Y+ IV + C S + ++ I +C N + + ++ S TL ++ YN +E
Sbjct: 7 NYYRWIIVGVGFLCLTSICSNFIVINFTFICMKNDMSDAVTDSNGTLRSIYDYNGSE--K 64
Query: 289 KWILWSI 309
KWILW++
Sbjct: 65 KWILWAV 71
>U64844-13|AAD56301.1| 453|Caenorhabditis elegans Hypothetical
protein T22F3.11a protein.
Length = 453
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = +1
Query: 118 SYFYGCIVRIHCRCSWSHWAQWLCI--LRVCSCNALDNVLSQSWTTLEQVF-YNQTECSD 288
+Y+ IV + C S + ++ I +C N + + ++ S TL ++ YN +E
Sbjct: 7 NYYRWIIVGVGFLCLTSICSNFIVINFTFICMKNDMSDAVTDSNGTLRSIYDYNGSE--K 64
Query: 289 KWILWSI 309
KWILW++
Sbjct: 65 KWILWAV 71
>U23528-2|AAK31387.1| 984|Caenorhabditis elegans
Calsyntenin/alcadein homolog protein1, isoform a
protein.
Length = 984
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = -2
Query: 571 KDLELSSASMLCDSD*FNLNTVHNLYSNKYLNNCKI 464
KD + + ++LC+SD FN+N H + Y+ +CK+
Sbjct: 376 KDEQSNKQNILCESDDFNMNRHH---FSVYIRHCKL 408
>AY091591-1|AAM00045.1| 984|Caenorhabditis elegans calsyntenin
protein.
Length = 984
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = -2
Query: 571 KDLELSSASMLCDSD*FNLNTVHNLYSNKYLNNCKI 464
KD + + ++LC+SD FN+N H + Y+ +CK+
Sbjct: 376 KDEQSNKQNILCESDDFNMNRHH---FSVYIRHCKL 408
>U43282-3|AAA83614.3| 499|Caenorhabditis elegans Glutamate
transporter family protein4 protein.
Length = 499
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +2
Query: 122 TSMAALSGSTAGVLGLTGLNGFAFYVFAVVMLWIMFLVKVGP 247
TS+A+L TAG LG+ + + F V L I+ + + P
Sbjct: 68 TSLASLDSGTAGRLGMVSMIYYTLTTFFAVFLGIVLVSVIKP 109
>AY125085-1|AAM94369.1| 1113|Caenorhabditis elegans regulatory
cytoplasmic polyA polymeraseprotein.
Length = 1113
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Frame = -3
Query: 315 VNNAPKNPFVR-TLCLVIKYLLQCGPT-LTKNIIQS 214
+N+A K+ F +L L++ + LQCGPT + N+ QS
Sbjct: 709 INDANKSSFTSYSLVLMVIHFLQCGPTKVLPNLQQS 744
>AF024497-5|AAO21477.1| 871|Caenorhabditis elegans Defective in
germ line developmentprotein 2, isoform b protein.
Length = 871
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Frame = -3
Query: 315 VNNAPKNPFVR-TLCLVIKYLLQCGPT-LTKNIIQS 214
+N+A K+ F +L L++ + LQCGPT + N+ QS
Sbjct: 467 INDANKSSFTSYSLVLMVIHFLQCGPTKVLPNLQQS 502
>AF024497-4|AAO21479.1| 807|Caenorhabditis elegans Defective in
germ line developmentprotein 2, isoform d protein.
Length = 807
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Frame = -3
Query: 315 VNNAPKNPFVR-TLCLVIKYLLQCGPT-LTKNIIQS 214
+N+A K+ F +L L++ + LQCGPT + N+ QS
Sbjct: 403 INDANKSSFTSYSLVLMVIHFLQCGPTKVLPNLQQS 438
>AF024497-3|AAO21478.1| 1036|Caenorhabditis elegans Defective in
germ line developmentprotein 2, isoform c protein.
Length = 1036
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Frame = -3
Query: 315 VNNAPKNPFVR-TLCLVIKYLLQCGPT-LTKNIIQS 214
+N+A K+ F +L L++ + LQCGPT + N+ QS
Sbjct: 632 INDANKSSFTSYSLVLMVIHFLQCGPTKVLPNLQQS 667
>AF024497-2|AAB70342.2| 1113|Caenorhabditis elegans Defective in
germ line developmentprotein 2, isoform a protein.
Length = 1113
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Frame = -3
Query: 315 VNNAPKNPFVR-TLCLVIKYLLQCGPT-LTKNIIQS 214
+N+A K+ F +L L++ + LQCGPT + N+ QS
Sbjct: 709 INDANKSSFTSYSLVLMVIHFLQCGPTKVLPNLQQS 744
>U67952-1|AAB07577.2| 414|Caenorhabditis elegans Hypothetical
protein F39B3.2 protein.
Length = 414
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 251 WSKYFITRQSVLTNGFFGALFTY 319
W+ YFI S L NG+F A F +
Sbjct: 20 WALYFIQMLSHLLNGYFTAFFVF 42
>U20862-3|AAN65283.1| 137|Caenorhabditis elegans Hypothetical
protein W06E11.5b protein.
Length = 137
Score = 27.9 bits (59), Expect = 6.4
Identities = 10/44 (22%), Positives = 20/44 (45%)
Frame = +1
Query: 229 LSQSWTTLEQVFYNQTECSDKWILWSIIYICTILDVHLWDGSCL 360
LS + + + V + S +W+L + + C + +W CL
Sbjct: 77 LSATLSRVNSVLKRHVQTSSRWLLCGLAFCCCSIGCSMWPVLCL 120
>U20862-2|AAK29864.1| 179|Caenorhabditis elegans Hypothetical
protein W06E11.5a protein.
Length = 179
Score = 27.9 bits (59), Expect = 6.4
Identities = 10/44 (22%), Positives = 20/44 (45%)
Frame = +1
Query: 229 LSQSWTTLEQVFYNQTECSDKWILWSIIYICTILDVHLWDGSCL 360
LS + + + V + S +W+L + + C + +W CL
Sbjct: 77 LSATLSRVNSVLKRHVQTSSRWLLCGLAFCCCSIGCSMWPVLCL 120
>AF248541-1|AAF63761.1| 179|Caenorhabditis elegans cysteine-rich
hydrophobic protein protein.
Length = 179
Score = 27.9 bits (59), Expect = 6.4
Identities = 10/44 (22%), Positives = 20/44 (45%)
Frame = +1
Query: 229 LSQSWTTLEQVFYNQTECSDKWILWSIIYICTILDVHLWDGSCL 360
LS + + + V + S +W+L + + C + +W CL
Sbjct: 77 LSATLSRVNSVLKRHVQTSSRWLLCGLAFCCCSIGCSMWPVLCL 120
>Z99277-6|CAB16484.1| 677|Caenorhabditis elegans Hypothetical
protein Y53C12A.1 protein.
Length = 677
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 176 LNGFAFYVFAVVMLWIMFLVKV 241
LNGF FY F+ V++W+M V
Sbjct: 372 LNGF-FYAFSAVLVWVMAFFSV 392
>Z66562-6|CAA91463.1| 1266|Caenorhabditis elegans Hypothetical
protein F42E11.1 protein.
Length = 1266
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 215 LWIMFLVKVGPHWSKYFITRQSVLTNGFFGALFTYVLFWTFIYG 346
L++MF++ G W +T V T+G T+ +FW I G
Sbjct: 285 LFLMFVLMAGAFWYGAILTSYGVATSG-----TTFGVFWAVILG 323
>U39472-10|AAZ82853.1| 354|Caenorhabditis elegans Serpentine
receptor, class a (alpha)protein 36 protein.
Length = 354
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +1
Query: 367 YTS*SCYSIRGNRNIRYIVHYTTTISNYIYTRLFCNY---LNIYLNKD 501
Y S Y+ + N N IV + + + IYT + LNIY+N D
Sbjct: 230 YNLKSRYNNKSNMNSSIIVSFISFVQTLIYTIYILGFFIVLNIYVNAD 277
>AC006615-3|AAK68232.1| 1148|Caenorhabditis elegans Hypothetical
protein C36B7.5b protein.
Length = 1148
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 7/60 (11%)
Frame = +1
Query: 163 WSHWAQWLCILRVCSC-------NALDNVLSQSWTTLEQVFYNQTECSDKWILWSIIYIC 321
WS+W QW + C +D V S + E++ NQ C + W W+ +C
Sbjct: 448 WSNWGQWEKCSKECGAGHTYRNRECIDGV-SCEGASEEKILCNQQPCPE-WSQWTAWTVC 505
>AC006615-2|AAK68231.1| 1121|Caenorhabditis elegans Hypothetical
protein C36B7.5a protein.
Length = 1121
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 7/60 (11%)
Frame = +1
Query: 163 WSHWAQWLCILRVCSC-------NALDNVLSQSWTTLEQVFYNQTECSDKWILWSIIYIC 321
WS+W QW + C +D V S + E++ NQ C + W W+ +C
Sbjct: 448 WSNWGQWEKCSKECGAGHTYRNRECIDGV-SCEGASEEKILCNQQPCPE-WSQWTAWTVC 505
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,235,459
Number of Sequences: 27780
Number of extensions: 276983
Number of successful extensions: 857
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 856
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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