Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_E04
(632 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 28 0.087
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 28 0.087
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 28 0.087
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 28 0.087
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 25 0.46
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 25 0.46
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 25 0.81
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 25 0.81
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 25 0.81
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 23 1.9
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 22 5.7
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 5.7
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 5.7
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 5.7
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 21 7.5
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 21 9.9
AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc fi... 21 9.9
AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 21 9.9
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 27.9 bits (59), Expect = 0.087
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 520 NLNTVHNLYSNKYLNNCKIV*YKYNWI 440
N N +N +N Y NNCK + Y N+I
Sbjct: 93 NNNYKYNYNNNNYNNNCKKLYYNINYI 119
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 27.9 bits (59), Expect = 0.087
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 520 NLNTVHNLYSNKYLNNCKIV*YKYNWI 440
N N +N +N Y NNCK + Y N+I
Sbjct: 93 NNNYKYNYNNNNYNNNCKKLYYNINYI 119
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 27.9 bits (59), Expect = 0.087
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 520 NLNTVHNLYSNKYLNNCKIV*YKYNWI 440
N N +N +N Y NNCK + Y N+I
Sbjct: 93 NNNYKYNYNNNNYNNNCKKLYYNINYI 119
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 27.9 bits (59), Expect = 0.087
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 520 NLNTVHNLYSNKYLNNCKIV*YKYNWI 440
N N +N +N Y NNCK + Y N+I
Sbjct: 93 NNNYKYNYNNNNYNNNCKKLYYNINYI 119
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 25.4 bits (53), Expect = 0.46
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Frame = -2
Query: 511 TVHNL--YSNKYLNNCKIV*YKYNWI 440
T+HN Y Y NNCK + Y N+I
Sbjct: 89 TIHNNNNYKYNYNNNCKKLYYNINYI 114
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 25.4 bits (53), Expect = 0.46
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -2
Query: 520 NLNTVHNLYSNKYLNNCKIV*Y 455
N N +N Y+N Y NNCK + Y
Sbjct: 335 NNNYNNNNYNNNYNNNCKKLYY 356
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.6 bits (51), Expect = 0.81
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -2
Query: 571 KDLELSSASMLCDSD*FNLNTVHNLYSNKYLNNCKIV*YKYNWI 440
K+ E S + S N N +N Y Y NN K + Y N+I
Sbjct: 71 KEREKSKEHKIISSLSNNYNYNNNNYKKLYCNNYKKLYYNINYI 114
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.6 bits (51), Expect = 0.81
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -2
Query: 571 KDLELSSASMLCDSD*FNLNTVHNLYSNKYLNNCKIV*YKYNWI 440
K+ E S + S N N +N Y Y NN K + Y N+I
Sbjct: 71 KEREKSKEHKIISSLSNNYNYNNNNYKKLYCNNYKKLYYNINYI 114
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 24.6 bits (51), Expect = 0.81
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 520 NLNTVHNLYSNKYLNNCKIV*YKYNWI 440
N N +N Y+N Y NN K + Y N+I
Sbjct: 333 NYNNYNN-YNNNYNNNYKKLYYNINYI 358
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 1.9
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = -2
Query: 571 KDLELSSASMLCDSD*FNLNTVHNLYSNKYLNNCKIV*YKYNWI 440
K+ E S + S N N +N Y Y NN + + Y N+I
Sbjct: 71 KEREKSKEHKIISSLSNNYNYNNNNYKKLYCNNYRKLYYNINYI 114
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 5.7
Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Frame = -2
Query: 511 TVHNL--YSNKYLNNCKIV*YKYNWI 440
T+HN Y+N NN K + Y N+I
Sbjct: 89 TIHNNNNYNNNNYNNYKKLYYNINYI 114
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.8 bits (44), Expect = 5.7
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +1
Query: 163 WSHWAQWLCILRVCSC 210
WSH WLC L C
Sbjct: 527 WSHVLGWLCGLSSMLC 542
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.8 bits (44), Expect = 5.7
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +1
Query: 163 WSHWAQWLCILRVCSC 210
WSH WLC L C
Sbjct: 580 WSHVLGWLCGLSSMLC 595
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 5.7
Identities = 11/21 (52%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = -3
Query: 597 SPNKQLTVKKI*N-YQVHQCY 538
SP+KQLT+ +I N +Q CY
Sbjct: 520 SPDKQLTLNEIYNWFQNTFCY 540
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 7.5
Identities = 6/19 (31%), Positives = 13/19 (68%)
Frame = -2
Query: 247 WSNFD*EHYPEHYNCKHVE 191
++N++ + P HYN ++E
Sbjct: 324 YNNYNNNYKPLHYNINYIE 342
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 21.0 bits (42), Expect = 9.9
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = -2
Query: 328 K*YICK*CSKESICQNTL 275
K Y+CK C K C L
Sbjct: 202 KPYVCKACGKGFTCSKQL 219
>AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc
finger domain-Z3 isoform protein.
Length = 92
Score = 21.0 bits (42), Expect = 9.9
Identities = 7/22 (31%), Positives = 15/22 (68%)
Frame = -2
Query: 322 YICK*CSKESICQNTLSGYKIL 257
Y+C+ C++ +N+L+ +K L
Sbjct: 36 YVCEFCNRRYRTKNSLTTHKSL 57
>AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein.
Length = 493
Score = 21.0 bits (42), Expect = 9.9
Identities = 8/25 (32%), Positives = 12/25 (48%)
Frame = -2
Query: 181 IEPSETKNTCSGS*QCSHRSTTVFD 107
+ PS N CS C HR +++
Sbjct: 365 LSPSIHDNICSNGWICEHRWRQIYN 389
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,949
Number of Sequences: 438
Number of extensions: 3365
Number of successful extensions: 22
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18949215
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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