Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_E03
         (457 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    22   8.9  
AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.    22   8.9  

>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 8.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 220 LAILPTPTRPHTL 258
           +A+ P PT+PH L
Sbjct: 175 IAVQPAPTQPHEL 187


>AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.
          Length = 391

 Score = 22.2 bits (45), Expect = 8.9
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -2

Query: 282 WLSISERSKCMGPSRCRQNSQ 220
           WLS+S++ KC     C    Q
Sbjct: 49  WLSVSQQEKCPLNKYCENKIQ 69


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 313,124
Number of Sequences: 2352
Number of extensions: 4358
Number of successful extensions: 29
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39119412
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)