BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_E02
(434 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 27 0.091
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 23 2.0
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 23 2.0
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 22 2.6
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 22 2.6
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 22 2.6
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 22 2.6
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 22 2.6
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 21 4.5
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 21 4.5
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 21 7.9
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 21 7.9
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 27.1 bits (57), Expect = 0.091
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 230 KSHMQMIISFVNKMLK*IHTSGTSSVTINKIYCCWL 337
+SH Q S +N++ + T+GT +V + CWL
Sbjct: 288 RSHQQ---SCINRVARETKTAGTLAVVVGGFVACWL 320
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 22.6 bits (46), Expect = 2.0
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +2
Query: 71 RF*SQCWLSSPARRP 115
R QCW P++RP
Sbjct: 833 RLMEQCWSGEPSKRP 847
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 22.6 bits (46), Expect = 2.0
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +2
Query: 71 RF*SQCWLSSPARRP 115
R QCW P++RP
Sbjct: 871 RLMEQCWSGEPSKRP 885
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 2.6
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 172 VSSLSVPTVYSSAFTGFYPQIAYANDYIFRK*NVKVNTYIWNF 300
+SSLS YS+ Y Q+ Y +YI + V V Y NF
Sbjct: 82 ISSLSNNYNYSNYNNNNYKQLCYNINYI-EQIPVPVPVYYGNF 123
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 2.6
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 172 VSSLSVPTVYSSAFTGFYPQIAYANDYIFRK*NVKVNTYIWNF 300
+SSLS YS+ Y Q+ Y +YI + V V Y NF
Sbjct: 82 ISSLSNNYNYSNYNNNNYKQLCYNINYI-EQIPVPVPVYYGNF 123
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 2.6
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 172 VSSLSVPTVYSSAFTGFYPQIAYANDYIFRK*NVKVNTYIWNF 300
+SSLS YS+ Y Q+ Y +YI + V V Y NF
Sbjct: 82 ISSLSNNYNYSNYNNNNYKQLCYNINYI-EQIPVPVPVYYGNF 123
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 2.6
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 172 VSSLSVPTVYSSAFTGFYPQIAYANDYIFRK*NVKVNTYIWNF 300
+SSLS YS+ Y Q+ Y +YI + V V Y NF
Sbjct: 82 ISSLSNNYNYSNYNNNNYKQLCYNINYI-EQIPVPVPVYYGNF 123
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 2.6
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 172 VSSLSVPTVYSSAFTGFYPQIAYANDYIFRK*NVKVNTYIWNF 300
+SSLS YS+ Y Q+ Y +YI + V V Y NF
Sbjct: 82 ISSLSNNYNYSNYNNNNYKQLCYNINYI-EQIPVPVPVYYGNF 123
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 21.4 bits (43), Expect = 4.5
Identities = 7/22 (31%), Positives = 15/22 (68%)
Frame = -3
Query: 318 LFIVTEEVPDVCIYFNILFTKD 253
+F+V +EVP +Y ++ ++D
Sbjct: 563 VFVVPDEVPSDVLYNRLVVSED 584
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 21.4 bits (43), Expect = 4.5
Identities = 7/22 (31%), Positives = 15/22 (68%)
Frame = -3
Query: 318 LFIVTEEVPDVCIYFNILFTKD 253
+F+V +EVP +Y ++ ++D
Sbjct: 563 VFVVPDEVPSDVLYNRLVVSED 584
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 20.6 bits (41), Expect = 7.9
Identities = 8/30 (26%), Positives = 16/30 (53%)
Frame = +1
Query: 211 FTGFYPQIAYANDYIFRK*NVKVNTYIWNF 300
+ G+YP + Y+N F + + N I+ +
Sbjct: 292 YPGYYPTMTYSNGLPFPQRPIWSNFPIYKY 321
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 20.6 bits (41), Expect = 7.9
Identities = 8/30 (26%), Positives = 16/30 (53%)
Frame = +1
Query: 211 FTGFYPQIAYANDYIFRK*NVKVNTYIWNF 300
+ G+YP + Y+N F + + N I+ +
Sbjct: 292 YPGYYPTMTYSNGLPFPQRPIWSNFPIYKY 321
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,958
Number of Sequences: 438
Number of extensions: 2130
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11368164
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -