Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_D24
         (483 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222289-1|ABN79649.1|   68|Tribolium castaneum adipokinetic hor...    49   3e-08
EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic hor...    33   0.001
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    22   3.4  

>EF222289-1|ABN79649.1|   68|Tribolium castaneum adipokinetic
           hormone 2 protein.
          Length = 68

 Score = 48.8 bits (111), Expect = 3e-08
 Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
 Frame = +3

Query: 60  MYKFTILFLVLACFIMAEAQLTFTSSWGGKRAAIAGTVSCRND-EALASIYKLIQNEAEK 236
           M++  +  L++    +  AQL FT +WG KRA    +  C+   + +  IYK+IQNEA+K
Sbjct: 1   MHRVLLTVLLITIVGLCAAQLNFTPNWG-KRAPEGESNRCKESVDTIMLIYKIIQNEAQK 59

Query: 237 LLLCQK 254
           L+ C+K
Sbjct: 60  LVDCEK 65


>EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic
           hormone 1 protein.
          Length = 73

 Score = 33.1 bits (72), Expect = 0.001
 Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
 Frame = +3

Query: 78  LFLVLACFI-MAEAQLTFTSSWGGKRAAIAGT--VSCRND-EALASIYKLIQ 221
           L +VL  F+ +  AQL F++ WG +  + AG+   +C+   E +  IYK+IQ
Sbjct: 6   LIVVLIAFVGVCTAQLNFSTDWGKRSGSSAGSDANNCKEPVETIMLIYKIIQ 57


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -1

Query: 198 PRLHRSCRTQC 166
           P+LH  CR++C
Sbjct: 79  PQLHNLCRSEC 89


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,361
Number of Sequences: 336
Number of extensions: 2104
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11352204
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)