Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_D20
         (530 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0X528 Cluster: Putative uncharacterized protein precur...    36   0.77 
UniRef50_Q9U8C9 Cluster: Putative uncharacterized protein T11F1....    29   3.6  
UniRef50_A5K441 Cluster: Putative uncharacterized protein; n=2; ...    33   4.1  
UniRef50_Q70BI6 Cluster: Putative uncharacterized protein; n=1; ...    33   5.4  
UniRef50_UPI0000498FA4 Cluster: conserved hypothetical protein; ...    32   9.5  
UniRef50_A2FFF6 Cluster: Putative uncharacterized protein; n=1; ...    32   9.5  
UniRef50_Q9UHD0 Cluster: Interleukin-19 precursor; n=14; Theria|...    32   9.5  

>UniRef50_A0X528 Cluster: Putative uncharacterized protein
           precursor; n=1; Shewanella pealeana ATCC 700345|Rep:
           Putative uncharacterized protein precursor - Shewanella
           pealeana ATCC 700345
          Length = 170

 Score = 35.5 bits (78), Expect = 0.77
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = -3

Query: 156 NNSNPEPKICELTPHFFGFILVCPFSFIFLGFCRIVYIWKTSS 28
           N SNP+  + + T H F  I +  FS I +  C ++Y+  TSS
Sbjct: 119 NPSNPDTAVIKPTMHLFMIIALVVFSLILIPVCYLMYLQMTSS 161


>UniRef50_Q9U8C9 Cluster: Putative uncharacterized protein T11F1.6;
           n=1; Caenorhabditis elegans|Rep: Putative
           uncharacterized protein T11F1.6 - Caenorhabditis elegans
          Length = 431

 Score = 29.5 bits (63), Expect(2) = 3.6
 Identities = 9/15 (60%), Positives = 14/15 (93%)
 Frame = +1

Query: 220 ENLHPNYCIEGVSFA 264
           +N+H NYC++GVSF+
Sbjct: 323 KNIHANYCLDGVSFS 337



 Score = 22.6 bits (46), Expect(2) = 3.6
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = +1

Query: 208 VITHENLHPNYCI 246
           ++  ENLHP++C+
Sbjct: 295 IMNLENLHPDFCL 307


>UniRef50_A5K441 Cluster: Putative uncharacterized protein; n=2;
            Plasmodium|Rep: Putative uncharacterized protein -
            Plasmodium vivax
          Length = 5540

 Score = 33.1 bits (72), Expect = 4.1
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = +3

Query: 423  TTGAECNHALNNAELNLFFVDCNKKKNYINETLI 524
            +TG +CN+     +++ F  +CN+ KN+ NE L+
Sbjct: 4394 STGYQCNNCQKGYDMSHFKSNCNRCKNFFNEILL 4427


>UniRef50_Q70BI6 Cluster: Putative uncharacterized protein; n=1;
           Enterobacteria phage BF23|Rep: Putative uncharacterized
           protein - Bacteriophage BF23
          Length = 157

 Score = 32.7 bits (71), Expect = 5.4
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = -3

Query: 516 FHLYNFSFYYNQRRTNSVLHYLVRDY-ILLLWWSDPFL 406
           + LY+F F  ++RRT   LH L++DY +   W+  P L
Sbjct: 108 YKLYHFRFSSDKRRTEKALHNLLKDYKVSGEWFEVPLL 145


>UniRef50_UPI0000498FA4 Cluster: conserved hypothetical protein; n=2;
            Entamoeba histolytica HM-1:IMSS|Rep: conserved
            hypothetical protein - Entamoeba histolytica HM-1:IMSS
          Length = 2591

 Score = 31.9 bits (69), Expect = 9.5
 Identities = 26/99 (26%), Positives = 38/99 (38%), Gaps = 1/99 (1%)
 Frame = -3

Query: 315  GATILYISAVKSLSVLTGKGHTLYAIIRM*IFMSDDFHDIT-SMGCRSSLLGILNNSNPE 139
            G  +L I  +  L+    + HTL  II    F     HD T S      L+ I+N  + +
Sbjct: 1022 GPQLLEIKEINKLNDQLQQRHTLMFIILRQYFQLILTHDKTISKMALQELINIMNKYDLD 1081

Query: 138  PKICELTPHFFGFILVCPFSFIFLGFCRIVYIWKTSSCL 22
             +    T     F ++ PF    L     +  WK   CL
Sbjct: 1082 KQFSTQTERDKFFNMIFPFVLFILDDSEKINEWKAKDCL 1120


>UniRef50_A2FFF6 Cluster: Putative uncharacterized protein; n=1;
            Trichomonas vaginalis G3|Rep: Putative uncharacterized
            protein - Trichomonas vaginalis G3
          Length = 2234

 Score = 31.9 bits (69), Expect = 9.5
 Identities = 28/117 (23%), Positives = 53/117 (45%), Gaps = 7/117 (5%)
 Frame = -3

Query: 372  NLK*FRRPL----LVLGCIVSL---CGATILYISAVKSLSVLTGKGHTLYAIIRM*IFMS 214
            N K F++PL    + L C  S+   C A  L++ +VKS +++T   H     I+   +  
Sbjct: 1515 NFKKFKQPLSPTEIELICTKSIRGECAALALHLISVKSNALVTSAIHLFETAIKNTKYSP 1574

Query: 213  DDFHDITSMGCRSSLLGILNNSNPEPKICELTPHFFGFILVCPFSFIFLGFCRIVYI 43
            D +  +  +   S+    L NSN    + ++ P    ++   P+S + L    + Y+
Sbjct: 1575 DSYFPLGPVATYSAFFKELQNSN---LVDDVVPRLSDYLPSSPYSCVPLLSLLVEYL 1628


>UniRef50_Q9UHD0 Cluster: Interleukin-19 precursor; n=14;
           Theria|Rep: Interleukin-19 precursor - Homo sapiens
           (Human)
          Length = 177

 Score = 31.9 bits (69), Expect = 9.5
 Identities = 15/32 (46%), Positives = 22/32 (68%)
 Frame = +1

Query: 340 HQEWSAKSLQIISSLSNDTIYFEKWVRPPQEQ 435
           HQE + K L+ ISS++N  +Y +K +R  QEQ
Sbjct: 93  HQEPNPKILRKISSIANSFLYMQKTLRQCQEQ 124


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 483,075,160
Number of Sequences: 1657284
Number of extensions: 8938336
Number of successful extensions: 21571
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 21067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21569
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33873797511
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)