Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_D20
         (530 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1347 + 32803664-32803796,32803891-32804093,32804202-328043...    29   1.8  
03_01_0458 - 3521938-3522024,3522133-3522213,3522673-3522806,352...    28   5.4  
03_01_0270 - 2085461-2086205,2086260-2086339,2086598-2086690,208...    27   7.1  

>04_04_1347 +
           32803664-32803796,32803891-32804093,32804202-32804383,
           32804514-32804798,32804901-32804959,32805052-32805088,
           32805186-32805257,32805336-32806005
          Length = 546

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 9/30 (30%), Positives = 19/30 (63%)
 Frame = -3

Query: 342 VLGCIVSLCGATILYISAVKSLSVLTGKGH 253
           + GCI+  CG  + + S +K++  + G+G+
Sbjct: 173 IAGCIILHCGQELFHSSTIKTVDYIVGQGN 202


>03_01_0458 - 3521938-3522024,3522133-3522213,3522673-3522806,
            3523189-3523270,3523420-3523692,3523953-3524162,
            3524252-3524337,3525197-3525289,3526003-3526227,
            3526320-3526930,3529328-3529395,3529491-3529679,
            3529773-3529901,3530013-3532484
          Length = 1579

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +3

Query: 261  CQSERIKTSRLKYTG*WHHTN 323
            CQS R+++ RLKYT  +H+ N
Sbjct: 1424 CQSCRLESRRLKYTSFFHNIN 1444


>03_01_0270 -
           2085461-2086205,2086260-2086339,2086598-2086690,
           2086774-2086881,2087012-2087101,2087234-2087275,
           2087516-2087587,2090848-2090985,2091074-2092624
          Length = 972

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +2

Query: 80  EKGQTKIKPKKWGVNSQIFGSGFELFRIPKSEDL 181
           E G TKI+PK++G N     +G E   + +S D+
Sbjct: 761 EDGSTKIEPKEYGGNVSCTETGVECSVLNQSTDV 794


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,682,068
Number of Sequences: 37544
Number of extensions: 232182
Number of successful extensions: 493
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 483
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 493
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1178343540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)