Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_D20
(530 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY040367-1|AAK91776.1| 215|Homo sapiens interleukin 19 protein. 32 1.4
AL513315-2|CAH71814.1| 215|Homo sapiens interleukin 19 protein. 32 1.4
AF453946-1|AAN40906.1| 177|Homo sapiens interleukin 19 protein. 32 1.4
AF390905-1|AAK64498.1| 177|Homo sapiens interleukin 19 protein. 32 1.4
AF276915-1|AAG16755.1| 177|Homo sapiens interleukin-19 protein. 32 1.4
AF192498-1|AAF06663.1| 177|Homo sapiens melanoma differentiatio... 32 1.4
BC035071-1|AAH35071.2| 883|Homo sapiens GABBR2 protein protein. 31 1.9
AL591502-3|CAI12581.1| 941|Homo sapiens gamma-aminobutyric acid... 31 1.9
AL445495-1|CAD13322.2| 941|Homo sapiens gamma-aminobutyric acid... 31 1.9
AL356282-1|CAH72233.1| 941|Homo sapiens gamma-aminobutyric acid... 31 1.9
AL353782-5|CAH71298.1| 941|Homo sapiens gamma-aminobutyric acid... 31 1.9
AJ012188-1|CAA09942.1| 941|Homo sapiens GABAB receptor, subunit... 31 1.9
AF099033-1|AAD45867.1| 941|Homo sapiens gamma-aminobutyric acid... 31 1.9
AF095784-1|AAD30389.1| 941|Homo sapiens GABA-B receptor R2 prot... 31 1.9
AF074483-1|AAD03336.1| 941|Homo sapiens GABA-B receptor 2 protein. 31 1.9
AF069755-1|AAC99345.1| 941|Homo sapiens orphan G protein-couple... 31 1.9
AF056085-1|AAC63228.1| 941|Homo sapiens GABA-B receptor protein. 31 1.9
>AY040367-1|AAK91776.1| 215|Homo sapiens interleukin 19 protein.
Length = 215
Score = 31.9 bits (69), Expect = 1.4
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +1
Query: 340 HQEWSAKSLQIISSLSNDTIYFEKWVRPPQEQ 435
HQE + K L+ ISS++N +Y +K +R QEQ
Sbjct: 131 HQEPNPKILRKISSIANSFLYMQKTLRQCQEQ 162
>AL513315-2|CAH71814.1| 215|Homo sapiens interleukin 19 protein.
Length = 215
Score = 31.9 bits (69), Expect = 1.4
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +1
Query: 340 HQEWSAKSLQIISSLSNDTIYFEKWVRPPQEQ 435
HQE + K L+ ISS++N +Y +K +R QEQ
Sbjct: 131 HQEPNPKILRKISSIANSFLYMQKTLRQCQEQ 162
>AF453946-1|AAN40906.1| 177|Homo sapiens interleukin 19 protein.
Length = 177
Score = 31.9 bits (69), Expect = 1.4
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +1
Query: 340 HQEWSAKSLQIISSLSNDTIYFEKWVRPPQEQ 435
HQE + K L+ ISS++N +Y +K +R QEQ
Sbjct: 93 HQEPNPKILRKISSIANSFLYMQKTLRQCQEQ 124
>AF390905-1|AAK64498.1| 177|Homo sapiens interleukin 19 protein.
Length = 177
Score = 31.9 bits (69), Expect = 1.4
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +1
Query: 340 HQEWSAKSLQIISSLSNDTIYFEKWVRPPQEQ 435
HQE + K L+ ISS++N +Y +K +R QEQ
Sbjct: 93 HQEPNPKILRKISSIANSFLYMQKTLRQCQEQ 124
>AF276915-1|AAG16755.1| 177|Homo sapiens interleukin-19 protein.
Length = 177
Score = 31.9 bits (69), Expect = 1.4
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +1
Query: 340 HQEWSAKSLQIISSLSNDTIYFEKWVRPPQEQ 435
HQE + K L+ ISS++N +Y +K +R QEQ
Sbjct: 93 HQEPNPKILRKISSIANSFLYMQKTLRQCQEQ 124
>AF192498-1|AAF06663.1| 177|Homo sapiens melanoma differentiation
associated protein-like protein protein.
Length = 177
Score = 31.9 bits (69), Expect = 1.4
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +1
Query: 340 HQEWSAKSLQIISSLSNDTIYFEKWVRPPQEQ 435
HQE + K L+ ISS++N +Y +K +R QEQ
Sbjct: 93 HQEPNPKILRKISSIANSFLYMQKTLRQCQEQ 124
>BC035071-1|AAH35071.2| 883|Homo sapiens GABBR2 protein protein.
Length = 883
Score = 31.5 bits (68), Expect = 1.9
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1
Query: 518 CFIYIIFLFITINEEQIQFCII*CVITFCS 429
C I F+T ++ +QFCI+ VI FCS
Sbjct: 645 CIIGAAVSFLTRDQPNVQFCIVALVIIFCS 674
>AL591502-3|CAI12581.1| 941|Homo sapiens gamma-aminobutyric acid
(GABA) B receptor, 2 protein.
Length = 941
Score = 31.5 bits (68), Expect = 1.9
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1
Query: 518 CFIYIIFLFITINEEQIQFCII*CVITFCS 429
C I F+T ++ +QFCI+ VI FCS
Sbjct: 703 CIIGAAVSFLTRDQPNVQFCIVALVIIFCS 732
>AL445495-1|CAD13322.2| 941|Homo sapiens gamma-aminobutyric acid
(GABA) B receptor, 2 protein.
Length = 941
Score = 31.5 bits (68), Expect = 1.9
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1
Query: 518 CFIYIIFLFITINEEQIQFCII*CVITFCS 429
C I F+T ++ +QFCI+ VI FCS
Sbjct: 703 CIIGAAVSFLTRDQPNVQFCIVALVIIFCS 732
>AL356282-1|CAH72233.1| 941|Homo sapiens gamma-aminobutyric acid
(GABA) B receptor, 2 protein.
Length = 941
Score = 31.5 bits (68), Expect = 1.9
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1
Query: 518 CFIYIIFLFITINEEQIQFCII*CVITFCS 429
C I F+T ++ +QFCI+ VI FCS
Sbjct: 703 CIIGAAVSFLTRDQPNVQFCIVALVIIFCS 732
>AL353782-5|CAH71298.1| 941|Homo sapiens gamma-aminobutyric acid
(GABA) B receptor, 2 protein.
Length = 941
Score = 31.5 bits (68), Expect = 1.9
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1
Query: 518 CFIYIIFLFITINEEQIQFCII*CVITFCS 429
C I F+T ++ +QFCI+ VI FCS
Sbjct: 703 CIIGAAVSFLTRDQPNVQFCIVALVIIFCS 732
>AJ012188-1|CAA09942.1| 941|Homo sapiens GABAB receptor, subunit 2
protein.
Length = 941
Score = 31.5 bits (68), Expect = 1.9
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1
Query: 518 CFIYIIFLFITINEEQIQFCII*CVITFCS 429
C I F+T ++ +QFCI+ VI FCS
Sbjct: 703 CIIGAAVSFLTRDQPNVQFCIVALVIIFCS 732
>AF099033-1|AAD45867.1| 941|Homo sapiens gamma-aminobutyric acid
type B receptor 2 protein.
Length = 941
Score = 31.5 bits (68), Expect = 1.9
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1
Query: 518 CFIYIIFLFITINEEQIQFCII*CVITFCS 429
C I F+T ++ +QFCI+ VI FCS
Sbjct: 703 CIIGAAVSFLTRDQPNVQFCIVALVIIFCS 732
>AF095784-1|AAD30389.1| 941|Homo sapiens GABA-B receptor R2
protein.
Length = 941
Score = 31.5 bits (68), Expect = 1.9
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1
Query: 518 CFIYIIFLFITINEEQIQFCII*CVITFCS 429
C I F+T ++ +QFCI+ VI FCS
Sbjct: 703 CIIGAAVSFLTRDQPNVQFCIVALVIIFCS 732
>AF074483-1|AAD03336.1| 941|Homo sapiens GABA-B receptor 2 protein.
Length = 941
Score = 31.5 bits (68), Expect = 1.9
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1
Query: 518 CFIYIIFLFITINEEQIQFCII*CVITFCS 429
C I F+T ++ +QFCI+ VI FCS
Sbjct: 703 CIIGAAVSFLTRDQPNVQFCIVALVIIFCS 732
>AF069755-1|AAC99345.1| 941|Homo sapiens orphan G protein-coupled
receptor HG20 protein.
Length = 941
Score = 31.5 bits (68), Expect = 1.9
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1
Query: 518 CFIYIIFLFITINEEQIQFCII*CVITFCS 429
C I F+T ++ +QFCI+ VI FCS
Sbjct: 703 CIIGAAVSFLTRDQPNVQFCIVALVIIFCS 732
>AF056085-1|AAC63228.1| 941|Homo sapiens GABA-B receptor protein.
Length = 941
Score = 31.5 bits (68), Expect = 1.9
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1
Query: 518 CFIYIIFLFITINEEQIQFCII*CVITFCS 429
C I F+T ++ +QFCI+ VI FCS
Sbjct: 703 CIIGAAVSFLTRDQPNVQFCIVALVIIFCS 732
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,117,277
Number of Sequences: 237096
Number of extensions: 1397868
Number of successful extensions: 2566
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2566
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5160237082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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