Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_D20
(530 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 3.4
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 22 4.5
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 22 4.5
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 22 4.5
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 22 4.5
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 22 4.5
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 4.5
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 21 5.9
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 21 5.9
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 21 5.9
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 21 5.9
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 21 5.9
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 21 5.9
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 21 5.9
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 21 7.9
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 3.4
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +1
Query: 355 AKSLQIISSLSNDTIY 402
+K +IISSLSN TI+
Sbjct: 309 SKESKIISSLSNKTIH 324
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 4.5
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +1
Query: 355 AKSLQIISSLSNDTIY 402
+K +IISSLSN TI+
Sbjct: 76 SKEPKIISSLSNKTIH 91
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 4.5
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +1
Query: 355 AKSLQIISSLSNDTIY 402
+K +IISSLSN TI+
Sbjct: 76 SKEPKIISSLSNKTIH 91
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 21.8 bits (44), Expect = 4.5
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +1
Query: 355 AKSLQIISSLSNDTIY 402
+K +IISSLSN TI+
Sbjct: 76 SKEPKIISSLSNKTIH 91
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 4.5
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +1
Query: 355 AKSLQIISSLSNDTIY 402
+K +IISSLSN TI+
Sbjct: 76 SKEPKIISSLSNKTIH 91
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.8 bits (44), Expect = 4.5
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +1
Query: 355 AKSLQIISSLSNDTIY 402
+K +IISSLSN TI+
Sbjct: 298 SKEPKIISSLSNKTIH 313
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.8 bits (44), Expect = 4.5
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +1
Query: 355 AKSLQIISSLSNDTIY 402
+K +IISSLSN TI+
Sbjct: 309 SKEPKIISSLSNKTIH 324
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 5.9
Identities = 9/12 (75%), Positives = 12/12 (100%)
Frame = +1
Query: 367 QIISSLSNDTIY 402
+IISSLSN+TI+
Sbjct: 79 KIISSLSNNTIH 90
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 5.9
Identities = 9/12 (75%), Positives = 12/12 (100%)
Frame = +1
Query: 367 QIISSLSNDTIY 402
+IISSLSN+TI+
Sbjct: 79 KIISSLSNNTIH 90
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 5.9
Identities = 9/12 (75%), Positives = 12/12 (100%)
Frame = +1
Query: 367 QIISSLSNDTIY 402
+IISSLSN+TI+
Sbjct: 80 KIISSLSNNTIH 91
Score = 21.4 bits (43), Expect = 5.9
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = -3
Query: 522 SVFHLYNFSFYYNQRRTNSVLHYLVRDYI 436
+ H N+ + YN N L+Y + +YI
Sbjct: 88 NTIHNNNYKYNYNNNNYNKKLYYNI-NYI 115
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 5.9
Identities = 9/12 (75%), Positives = 12/12 (100%)
Frame = +1
Query: 367 QIISSLSNDTIY 402
+IISSLSN+TI+
Sbjct: 80 KIISSLSNNTIH 91
Score = 21.4 bits (43), Expect = 5.9
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = -3
Query: 522 SVFHLYNFSFYYNQRRTNSVLHYLVRDYI 436
+ H N+ + YN N L+Y + +YI
Sbjct: 88 NTIHNNNYKYNYNNNNYNKKLYYNI-NYI 115
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 5.9
Identities = 9/12 (75%), Positives = 12/12 (100%)
Frame = +1
Query: 367 QIISSLSNDTIY 402
+IISSLSN+TI+
Sbjct: 80 KIISSLSNNTIH 91
Score = 21.4 bits (43), Expect = 5.9
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = -3
Query: 522 SVFHLYNFSFYYNQRRTNSVLHYLVRDYI 436
+ H N+ + YN N L+Y + +YI
Sbjct: 88 NTIHNNNYKYNYNNNNYNKKLYYNI-NYI 115
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 5.9
Identities = 9/12 (75%), Positives = 12/12 (100%)
Frame = +1
Query: 367 QIISSLSNDTIY 402
+IISSLSN+TI+
Sbjct: 80 KIISSLSNNTIH 91
Score = 21.4 bits (43), Expect = 5.9
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = -3
Query: 522 SVFHLYNFSFYYNQRRTNSVLHYLVRDYI 436
+ H N+ + YN N L+Y + +YI
Sbjct: 88 NTIHNNNYKYNYNNNNYNKKLYYNI-NYI 115
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.4 bits (43), Expect = 5.9
Identities = 9/12 (75%), Positives = 12/12 (100%)
Frame = +1
Query: 367 QIISSLSNDTIY 402
+IISSLSN+TI+
Sbjct: 313 KIISSLSNNTIH 324
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 21.0 bits (42), Expect = 7.9
Identities = 7/22 (31%), Positives = 13/22 (59%)
Frame = +2
Query: 50 TILQKPKKMKEKGQTKIKPKKW 115
++ KP M+ + QT++ KW
Sbjct: 405 SVTSKPSTMERQTQTEVWIPKW 426
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,687
Number of Sequences: 438
Number of extensions: 2932
Number of successful extensions: 28
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14968302
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -