Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_D19
         (654 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P36099 Cluster: Putative uncharacterized protein YKL030...    37   0.49 
UniRef50_A0NB73 Cluster: ENSANGP00000030065; n=1; Anopheles gamb...    36   1.1  
UniRef50_Q4Z134 Cluster: Putative uncharacterized protein; n=1; ...    35   1.5  
UniRef50_A2DJ82 Cluster: Putative uncharacterized protein; n=1; ...    35   2.0  
UniRef50_UPI000023E6D2 Cluster: hypothetical protein FG03265.1; ...    34   2.6  
UniRef50_Q9G831 Cluster: NADH-ubiquinone oxidoreductase chain 2;...    34   3.4  
UniRef50_Q54CZ0 Cluster: Transcription initiation factor TFIID s...    33   4.5  
UniRef50_Q4XX57 Cluster: Putative uncharacterized protein; n=1; ...    33   6.0  
UniRef50_Q4XE98 Cluster: Putative uncharacterized protein; n=1; ...    33   6.0  
UniRef50_A7RXG3 Cluster: Predicted protein; n=1; Nematostella ve...    33   6.0  
UniRef50_A4VDL0 Cluster: Putative uncharacterized protein; n=1; ...    33   6.0  
UniRef50_A0BXF1 Cluster: Chromosome undetermined scaffold_134, w...    33   6.0  
UniRef50_Q5UQN8 Cluster: Putative TLC domain-containing protein ...    33   6.0  
UniRef50_A1VT05 Cluster: Putative uncharacterized protein; n=1; ...    33   7.9  
UniRef50_Q4DYP2 Cluster: Putative uncharacterized protein; n=2; ...    33   7.9  
UniRef50_Q0V2F0 Cluster: Predicted protein; n=1; Phaeosphaeria n...    33   7.9  

>UniRef50_P36099 Cluster: Putative uncharacterized protein YKL030W;
           n=1; Saccharomyces cerevisiae|Rep: Putative
           uncharacterized protein YKL030W - Saccharomyces
           cerevisiae (Baker's yeast)
          Length = 201

 Score = 36.7 bits (81), Expect = 0.49
 Identities = 18/50 (36%), Positives = 25/50 (50%)
 Frame = -3

Query: 517 YYIIIVNYYCVAVHYYFFCQYIYSFTYFFL*FTNKFLNIKLGHHYSIWIY 368
           YY IIV       +YY++  Y  S   FFL    K + I +  +YSIW +
Sbjct: 13  YYCIIVLLLYYYYYYYYYYYYGMSSIIFFLKIKKKIVQIYIFIYYSIWFF 62


>UniRef50_A0NB73 Cluster: ENSANGP00000030065; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000030065 - Anopheles gambiae
           str. PEST
          Length = 164

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 3/38 (7%)
 Frame = +1

Query: 271 FIFF--FCCIFNVACVLHIIYFIF-VIFLTIKYCYYKS 375
           F+FF  FC IF+ +C+LH ++  F +I+   + CY+ S
Sbjct: 34  FLFFVWFCFIFSCSCLLHSLFVCFIIIYFFTQSCYFSS 71


>UniRef50_Q4Z134 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 947

 Score = 35.1 bits (77), Expect = 1.5
 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
 Frame = -3

Query: 511 IIIVNYYCVAVHYYFFCQYIYSFTYFFL*FTNKFLNIKLG---HHYSIWIY 368
           II+ NYY      YFFC  IY F   F+ +T   ++IK+    ++Y + IY
Sbjct: 60  IILENYYIYIKLTYFFCVIIYLFLSSFVLYTLILISIKINLNKYNYPLHIY 110


>UniRef50_A2DJ82 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 220

 Score = 34.7 bits (76), Expect = 2.0
 Identities = 18/65 (27%), Positives = 31/65 (47%)
 Frame = -3

Query: 640 IIIHNLFTGPVYI*VDSRYIHYTLQYRH*STQTTYNVFDERYYIIIVNYYCVAVHYYFFC 461
           + +H  FT       D +YI Y L  +    Q T+N   + + II+  + CV    + + 
Sbjct: 89  LFVHEPFTQLREYLEDRKYIKYVLNVKE--AQKTFNTIRDHFKIIVNPFKCVLDESHMWS 146

Query: 460 QYIYS 446
           +YIY+
Sbjct: 147 EYIYN 151


>UniRef50_UPI000023E6D2 Cluster: hypothetical protein FG03265.1;
           n=2; Gibberella zeae PH-1|Rep: hypothetical protein
           FG03265.1 - Gibberella zeae PH-1
          Length = 368

 Score = 34.3 bits (75), Expect = 2.6
 Identities = 23/74 (31%), Positives = 32/74 (43%)
 Frame = +1

Query: 178 LWYEIAVMKR*TSKVSFLV*KGLSGPRFLVDFIFFFCCIFNVACVLHIIYFIFVIFLTIK 357
           LW EIA     T  + ++   GL GP   V F   FC +F V  ++ II     I    +
Sbjct: 48  LWGEIAANLVITV-IGWVFLDGLIGPTVPVLFFILFCWVFEVQLLMQIIVNRISIIAEHR 106

Query: 358 YCYYKSKWNNDDLI 399
              +K KW    +I
Sbjct: 107 STVFKLKWGTATII 120


>UniRef50_Q9G831 Cluster: NADH-ubiquinone oxidoreductase chain 2;
           n=16; Ditrysia|Rep: NADH-ubiquinone oxidoreductase chain
           2 - Bombyx mori (Silk moth)
          Length = 340

 Score = 33.9 bits (74), Expect = 3.4
 Identities = 13/42 (30%), Positives = 25/42 (59%)
 Frame = +1

Query: 262 LVDFIFFFCCIFNVACVLHIIYFIFVIFLTIKYCYYKSKWNN 387
           L++  +F   IF +  ++ I Y+I +I+ +  + Y+K KW N
Sbjct: 270 LINKFYFLTFIFMMTSLIIIYYYIRIIYSSFMFNYFKMKWVN 311


>UniRef50_Q54CZ0 Cluster: Transcription initiation factor TFIID
           subunit; n=3; Eukaryota|Rep: Transcription initiation
           factor TFIID subunit - Dictyostelium discoideum AX4
          Length = 3004

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = +1

Query: 223 SFLV*KGLSGPRFLVDFIFFFCCIFNVACVLHIIYFIFVIF 345
           SFL+   + G  FLVDF FF+   F     ++ I+FIF  F
Sbjct: 856 SFLIYLFIFGFWFLVDFYFFYFFFFYFFFFIYFIFFIFFFF 896


>UniRef50_Q4XX57 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 154

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = -3

Query: 514 YIIIVNY-YCVAVHYYFFCQYIYSFTYFFL*FTNKF 410
           YII   Y Y V   Y+ + QYI++F YFFL  T+ F
Sbjct: 106 YIIYCKYLYMVLSIYFHYFQYIHNFIYFFLSETSWF 141


>UniRef50_Q4XE98 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 65

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +1

Query: 259 FLVDFIFFFCCIFNVACVLHIIYFIFVIFLTIKY 360
           FLV  I+F C   +V  V  IIY +F+ + T +Y
Sbjct: 13  FLVSVIYFVCICSHVCFVPFIIYILFIYYKTFEY 46


>UniRef50_A7RXG3 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 492

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 24/94 (25%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
 Frame = -3

Query: 643 NIIIHNLFTGPVYI*VDSRYIHYTLQYRH*STQTTYNVF-----DERYYIIIVNYYCVAV 479
           +II H+ F    ++ +   YI   + + +  +  T++ F        ++ II ++Y +++
Sbjct: 214 SIITHHYF----FVIITHHYIFSIITHHYFFSIITHHYFFSIITHHYFFSIITHHYFLSI 269

Query: 478 --HYYFFCQYIYSFTYFFL*FTNKFLNIKLGHHY 383
             H+YFF   I +  YFF  FT+ +    + HHY
Sbjct: 270 ITHHYFFS--IITHHYFFSIFTHHYFFSIITHHY 301



 Score = 33.1 bits (72), Expect = 6.0
 Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
 Frame = -3

Query: 538 YNVFDERYYIIIVN---YYCVAVHYYFFCQYIYSFTYFFL*FTNKFLNIKLGHHY 383
           +++F   Y+  I+    ++ +  H++FF   I +  YFF   T+ +  + + HHY
Sbjct: 285 FSIFTHHYFFSIITHHYFFSIITHHFFFS--IITHHYFFSIITHHYFFVIITHHY 337


>UniRef50_A4VDL0 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 235

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 19/60 (31%), Positives = 32/60 (53%)
 Frame = -3

Query: 535 NVFDERYYIIIVNYYCVAVHYYFFCQYIYSFTYFFL*FTNKFLNIKLGHHYSIWIYNNST 356
           N+F ++YY+II+         + F  Y+  F  F L F  + L+IKL ++Y  W  + S+
Sbjct: 68  NLFKQKYYLIILLKQIQRSISFIF--YVIFFHIFTLKFIEQSLSIKLINNYQYWNTDQSS 125


>UniRef50_A0BXF1 Cluster: Chromosome undetermined scaffold_134,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_134,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 435

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 5/39 (12%)
 Frame = +1

Query: 277 FFFCCI-----FNVACVLHIIYFIFVIFLTIKYCYYKSK 378
           +FFCC      F++ C + I+Y I  I L I+ CY K K
Sbjct: 393 YFFCCCGPIIAFSIICSIFILYAILFIPLFIRNCYRKIK 431


>UniRef50_Q5UQN8 Cluster: Putative TLC domain-containing protein
           L438; n=1; Acanthamoeba polyphaga mimivirus|Rep:
           Putative TLC domain-containing protein L438 - Mimivirus
          Length = 200

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 17/62 (27%), Positives = 36/62 (58%)
 Frame = -3

Query: 538 YNVFDERYYIIIVNYYCVAVHYYFFCQYIYSFTYFFL*FTNKFLNIKLGHHYSIWIYNNS 359
           +NV+   ++I IV+ Y   + YY+  +Y++++  F L  +  FLNI + +  +  +YN  
Sbjct: 69  HNVYFVHHFIGIVSIYFSYMKYYYLIKYLFAYLTFEL--STPFLNIAIKYR-NQGVYNKC 125

Query: 358 TL 353
           ++
Sbjct: 126 SI 127


>UniRef50_A1VT05 Cluster: Putative uncharacterized protein; n=1;
           Polaromonas naphthalenivorans CJ2|Rep: Putative
           uncharacterized protein - Polaromonas naphthalenivorans
           (strain CJ2)
          Length = 420

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 12/33 (36%), Positives = 23/33 (69%)
 Frame = +1

Query: 256 RFLVDFIFFFCCIFNVACVLHIIYFIFVIFLTI 354
           +F++ F+FFFC   ++  VL++  F FVI +++
Sbjct: 39  QFVILFLFFFCLFVDLGGVLYLRNFAFVILMSV 71


>UniRef50_Q4DYP2 Cluster: Putative uncharacterized protein; n=2;
           Trypanosoma cruzi|Rep: Putative uncharacterized protein
           - Trypanosoma cruzi
          Length = 422

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
 Frame = +1

Query: 259 FLVDFIFFFCCIFNVACVLHII---YFIFVIFLTIKYCYYKSKW 381
           +LV F+ F  C    A  ++I+   + +F  FL +  C+Y S W
Sbjct: 16  YLVSFLLFINCRIRSAVQVNILLSFFILFFFFLLLHLCFYHSMW 59


>UniRef50_Q0V2F0 Cluster: Predicted protein; n=1; Phaeosphaeria
           nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
           (Septoria nodorum)
          Length = 206

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 17/88 (19%), Positives = 35/88 (39%)
 Frame = -3

Query: 625 LFTGPVYI*VDSRYIHYTLQYRH*STQTTYNVFDERYYIIIVNYYCVAVHYYFFCQYIYS 446
           ++  P     D  Y +Y   Y +      Y  +   YY     YY    +YY++  Y Y 
Sbjct: 26  MYADPKDAYADYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY 85

Query: 445 FTYFFL*FTNKFLNIKLGHHYSIWIYNN 362
           + Y++  +   +      ++Y  + Y++
Sbjct: 86  YYYYYYYYYYYYYYYYYYYYYYYYYYDD 113


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 509,639,247
Number of Sequences: 1657284
Number of extensions: 9143613
Number of successful extensions: 23375
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 20896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22872
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)