Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_D19
(654 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_3479| Best HMM Match : PAH (HMM E-Value=4.7) 32 0.35
SB_28794| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.47
SB_38459| Best HMM Match : DUF948 (HMM E-Value=0.63) 31 0.82
SB_11187| Best HMM Match : F5_F8_type_C (HMM E-Value=3.7e-10) 31 0.82
SB_12991| Best HMM Match : TP2 (HMM E-Value=1.4) 31 1.1
SB_37888| Best HMM Match : Glycos_transf_4 (HMM E-Value=4.1) 29 3.3
SB_5256| Best HMM Match : EGF_2 (HMM E-Value=5.1) 29 3.3
SB_43520| Best HMM Match : RNase_PH (HMM E-Value=0.00011) 29 4.4
SB_59039| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_18244| Best HMM Match : Fukutin-related (HMM E-Value=3.7) 28 7.6
SB_54952| Best HMM Match : 7tm_1 (HMM E-Value=7.2e-16) 28 7.6
>SB_3479| Best HMM Match : PAH (HMM E-Value=4.7)
Length = 222
Score = 32.3 bits (70), Expect = 0.35
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -3
Query: 580 HYTLQYRH*STQTTYNVFDERYYIIIVNYYCVAVHYYFFCQYIYS 446
+Y + R+ Y RYY + V YY V V YY CQ + S
Sbjct: 114 YYKVCVRYYKVCVRYYKVCVRYYKVCVRYYKVCVRYYKVCQVLQS 158
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -3
Query: 580 HYTLQYRH*STQTTYNVFDERYYIIIVNYYCVAVHYYFFCQYIY 449
+Y + R+ Y RYY + V YY V V YY C Y
Sbjct: 30 YYKVCVRYYKVCVRYYKVCVRYYKVCVRYYKVCVRYYKVCVMYY 73
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = -3
Query: 583 IHYTLQYRH*STQTTYNVFDERYYIIIVNYYCVAVHYYFFCQYIY 449
++Y + R+ Y RYY + V YY V V YY C Y
Sbjct: 85 MYYKVCVRYYKVCVRYYKVCVRYYKVCVRYYKVCVRYYKVCVRYY 129
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -3
Query: 580 HYTLQYRH*STQTTYNVFDERYYIIIVNYYCVAVHYYFFCQYIY 449
+Y + R+ Y RYY + V YY V V YY C Y
Sbjct: 2 YYKVCVRYYKVCVRYYKVCVRYYKVCVRYYKVCVRYYKVCVRYY 45
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -3
Query: 580 HYTLQYRH*STQTTYNVFDERYYIIIVNYYCVAVHYYFFCQYIY 449
+Y + R+ Y RYY + V YY V V YY C Y
Sbjct: 9 YYKVCVRYYKVCVRYYKVCVRYYKVCVRYYKVCVRYYKVCVRYY 52
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -3
Query: 580 HYTLQYRH*STQTTYNVFDERYYIIIVNYYCVAVHYYFFCQYIY 449
+Y + R+ Y RYY + V YY V V YY C Y
Sbjct: 16 YYKVCVRYYKVCVRYYKVCVRYYKVCVRYYKVCVRYYKVCVRYY 59
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -3
Query: 580 HYTLQYRH*STQTTYNVFDERYYIIIVNYYCVAVHYYFFCQYIY 449
+Y + R+ Y RYY + V YY V V YY C Y
Sbjct: 23 YYKVCVRYYKVCVRYYKVCVRYYKVCVRYYKVCVRYYKVCVRYY 66
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -3
Query: 580 HYTLQYRH*STQTTYNVFDERYYIIIVNYYCVAVHYYFFCQYIY 449
+Y + R+ Y RYY + V YY V V YY C Y
Sbjct: 93 YYKVCVRYYKVCVRYYKVCVRYYKVCVRYYKVCVRYYKVCVRYY 136
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -3
Query: 580 HYTLQYRH*STQTTYNVFDERYYIIIVNYYCVAVHYYFFCQYIY 449
+Y + R+ Y RYY + V YY V V YY C Y
Sbjct: 100 YYKVCVRYYKVCVRYYKVCVRYYKVCVRYYKVCVRYYKVCVRYY 143
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -3
Query: 580 HYTLQYRH*STQTTYNVFDERYYIIIVNYYCVAVHYYFFCQYIY 449
+Y + R+ Y RYY + V YY V V YY C Y
Sbjct: 107 YYKVCVRYYKVCVRYYKVCVRYYKVCVRYYKVCVRYYKVCVRYY 150
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -3
Query: 580 HYTLQYRH*STQTTYNVFDERYYIIIVNYYCVAVHYYFFCQYIY 449
+Y + R+ Y RYY + V YY V V YY C Y
Sbjct: 37 YYKVCVRYYKVCVRYYKVCVRYYKVCVRYYKVCVMYYKVCVKYY 80
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -3
Query: 580 HYTLQYRH*STQTTYNVFDERYYIIIVNYYCVAVHYYFFCQYIY 449
+Y + R+ Y RYY + V YY V V YY C Y
Sbjct: 44 YYKVCVRYYKVCVRYYKVCVRYYKVCVMYYKVCVKYYKVCVMYY 87
>SB_28794| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 167
Score = 31.9 bits (69), Expect = 0.47
Identities = 13/52 (25%), Positives = 22/52 (42%)
Frame = -3
Query: 586 YIHYTLQYRH*STQTTYNVFDERYYIIIVNYYCVAVHYYFFCQYIYSFTYFF 431
Y +Y Y + Y + YY YY +YY++ Y Y + Y++
Sbjct: 110 YYYYYYYYYYYYYYYYYYYYYHHYYYYYYYYYYYYYYYYYYYYYYYYYYYYY 161
Score = 31.9 bits (69), Expect = 0.47
Identities = 13/52 (25%), Positives = 22/52 (42%)
Frame = -3
Query: 586 YIHYTLQYRH*STQTTYNVFDERYYIIIVNYYCVAVHYYFFCQYIYSFTYFF 431
Y +Y Y + Y + YY YY +YY++ Y Y + Y++
Sbjct: 111 YYYYYYYYYYYYYYYYYYYYHHYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY 162
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/52 (25%), Positives = 23/52 (44%)
Frame = -3
Query: 586 YIHYTLQYRH*STQTTYNVFDERYYIIIVNYYCVAVHYYFFCQYIYSFTYFF 431
Y +Y Y + Y + YY +YY +YY++ Y Y + Y++
Sbjct: 103 YYYYYYYYYYYYYYYYYYYYYYYYYYYYHHYYYYYYYYYYYYYYYYYYYYYY 154
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/66 (21%), Positives = 26/66 (39%)
Frame = -3
Query: 565 YRH*STQTTYNVFDERYYIIIVNYYCVAVHYYFFCQYIYSFTYFFL*FTNKFLNIKLGHH 386
YR Y + YY YY +YY++ Y Y + Y++ + + ++
Sbjct: 97 YRQRHAYYYYYYYYYYYYYYYYYYYYYYYYYYYYHHYYYYYYYYYYYYYYYYYYYYYYYY 156
Query: 385 YSIWIY 368
Y + Y
Sbjct: 157 YYYYYY 162
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/52 (25%), Positives = 21/52 (40%)
Frame = -3
Query: 586 YIHYTLQYRH*STQTTYNVFDERYYIIIVNYYCVAVHYYFFCQYIYSFTYFF 431
Y +Y Y + Y YY YY +YY++ Y Y + Y++
Sbjct: 112 YYYYYYYYYYYYYYYYYYYHHYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY 163
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/51 (25%), Positives = 22/51 (43%)
Frame = -3
Query: 586 YIHYTLQYRH*STQTTYNVFDERYYIIIVNYYCVAVHYYFFCQYIYSFTYF 434
Y +Y Y + Y+ + YY YY +YY++ Y Y + Y+
Sbjct: 114 YYYYYYYYYYYYYYYYYHHYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY 164
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/52 (23%), Positives = 22/52 (42%)
Frame = -3
Query: 586 YIHYTLQYRH*STQTTYNVFDERYYIIIVNYYCVAVHYYFFCQYIYSFTYFF 431
Y +Y Y + Y + +Y YY +YY++ Y Y + Y++
Sbjct: 109 YYYYYYYYYYYYYYYYYYYYYYHHYYYYYYYYYYYYYYYYYYYYYYYYYYYY 160
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/52 (25%), Positives = 22/52 (42%)
Frame = -3
Query: 586 YIHYTLQYRH*STQTTYNVFDERYYIIIVNYYCVAVHYYFFCQYIYSFTYFF 431
Y +Y Y + Y + YY YY +YY++ Y Y + Y++
Sbjct: 104 YYYYYYYYYYYYYYYYYYYYYYYYYYYHHYYYYYYYYYYYYYYYYYYYYYYY 155
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/52 (25%), Positives = 22/52 (42%)
Frame = -3
Query: 586 YIHYTLQYRH*STQTTYNVFDERYYIIIVNYYCVAVHYYFFCQYIYSFTYFF 431
Y +Y Y + Y + YY YY +YY++ Y Y + Y++
Sbjct: 105 YYYYYYYYYYYYYYYYYYYYYYYYYYHHYYYYYYYYYYYYYYYYYYYYYYYY 156
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/52 (25%), Positives = 22/52 (42%)
Frame = -3
Query: 586 YIHYTLQYRH*STQTTYNVFDERYYIIIVNYYCVAVHYYFFCQYIYSFTYFF 431
Y +Y Y + Y + YY YY +YY++ Y Y + Y++
Sbjct: 106 YYYYYYYYYYYYYYYYYYYYYYYYYHHYYYYYYYYYYYYYYYYYYYYYYYYY 157
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/74 (21%), Positives = 30/74 (40%)
Frame = -3
Query: 580 HYTLQYRH*STQTTYNVFDERYYIIIVNYYCVAVHYYFFCQYIYSFTYFFL*FTNKFLNI 401
H + RH + Y + YY YY +YY+ Y Y + Y++ + +
Sbjct: 94 HTVYRQRH-AYYYYYYYYYYYYYYYYYYYYYYYYYYYYHHYYYYYYYYYYYYYYYYYYYY 152
Query: 400 KLGHHYSIWIYNNS 359
++Y + Y +S
Sbjct: 153 YYYYYYYYYYYYHS 166
>SB_38459| Best HMM Match : DUF948 (HMM E-Value=0.63)
Length = 276
Score = 31.1 bits (67), Expect = 0.82
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = -3
Query: 580 HYTLQYRH*STQTTYNVFDERYYIIIVNYYCVAVHYYFFC--QYIYSFTYF 434
+Y + +R+ Y RYY + V YY V + YY C Y F Y+
Sbjct: 44 YYKVCFRYYKVCVRYYKVCVRYYKVCVRYYKVCIRYYKVCFRYYKVCFRYY 94
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = -3
Query: 580 HYTLQYRH*STQTTYNVFDERYYIIIVNYYCVAVHYYFFC--QYIYSFTYF 434
+Y + +R+ Y RYY + V YY V V YY C Y F Y+
Sbjct: 37 YYKVCFRYYKVCFRYYKVCVRYYKVCVRYYKVCVRYYKVCIRYYKVCFRYY 87
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -3
Query: 580 HYTLQYRH*STQTTYNVFDERYYIIIVNYYCVAVHYYFFCQYIY 449
+Y + +R+ Y RYY + V YY V V YY C Y
Sbjct: 86 YYKVCFRYYKVCVRYYKVCVRYYKVCVMYYKVCVRYYKVCVMYY 129
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -3
Query: 520 RYYIIIVNYYCVAVHYYFFC--QYIYSFTYF 434
RYY + V YY V V YY C Y F Y+
Sbjct: 15 RYYKVCVRYYKVCVRYYKVCIRYYKVCFRYY 45
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -3
Query: 580 HYTLQYRH*STQTTYNVFDERYYIIIVNYYCVAVHYYFFCQYIY 449
+Y + +R+ Y RYY + V YY V V YY C Y
Sbjct: 79 YYKVCFRYYKVCFRYYKVCVRYYKVCVRYYKVCVMYYKVCVRYY 122
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -3
Query: 520 RYYIIIVNYYCVAVHYYFFC--QYIYSFTYF 434
RYY + V YY V + YY C Y F Y+
Sbjct: 22 RYYKVCVRYYKVCIRYYKVCFRYYKVCFRYY 52
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -3
Query: 580 HYTLQYRH*STQTTYNVFDERYYIIIVNYYCVAVHYYFFCQYIY 449
+Y + R+ Y RYY + V YY V V YY C Y
Sbjct: 100 YYKVCVRYYKVCVMYYKVCVRYYKVCVMYYKVCVKYYKVCFRYY 143
>SB_11187| Best HMM Match : F5_F8_type_C (HMM E-Value=3.7e-10)
Length = 1163
Score = 31.1 bits (67), Expect = 0.82
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = -3
Query: 499 NYYCVAVHYYFFCQYIYSFTYFFL*FTNKFLNIKLGHHY 383
+++ + H+YFF I ++ YFF+ T+ ++ HHY
Sbjct: 1090 DFFSIITHHYFFS--IITYHYFFVIITHHYIFSIFTHHY 1126
Score = 31.1 bits (67), Expect = 0.82
Identities = 14/62 (22%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = -3
Query: 538 YNVFDERYYIIIVNY---YCVAVHYYFFCQYIYSFTYFFL*FTNKFLNIKLGHHYSIWIY 368
+++ Y+ I+ Y + + H+Y F I++ YFF T+ + + + +HY I+
Sbjct: 1092 FSIITHHYFFSIITYHYFFVIITHHYIFS--IFTHHYFFSIITHHYSFVIITYHYIFSIF 1149
Query: 367 NN 362
+
Sbjct: 1150 TH 1151
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/55 (23%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = -3
Query: 538 YNVFDERYYIIIVN---YYCVAVHYYFFCQYIYSFTYFFL*FTNKFLNIKLGHHY 383
+++ Y+ I+ ++ + H++FF I + YFF T+ + + + HHY
Sbjct: 993 FSIITHHYFFSIITHHFFFSIITHHFFFS--IITHHYFFSIITHHYFFVIITHHY 1045
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = -3
Query: 517 YYIIIVNYY--CVAVHYYFFCQYIYSFTYFFL*FTNKFLNIKLGHHY 383
+++II ++Y + H++FF I + YFF T+ + + + HHY
Sbjct: 1037 FFVIITHHYFFSIITHHFFFS--IITDHYFFSIITHHYFFVIITHHY 1081
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -3
Query: 499 NYYCVAVHYYFFCQYIYSFTYFFL*FTNKFLNIKLGHHY 383
+++ + H+YFF I + YFF T+ + + + HHY
Sbjct: 919 DFFSIITHHYFFS--IITDHYFFSIITHHYFFVIITHHY 955
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = -3
Query: 517 YYIIIVNYYCVAV--HYYFFCQYIYSFTYFFL*FTNKFLNIKLGHHY 383
+++II ++Y ++ H+YFF I + +FF T+ F + HH+
Sbjct: 947 FFVIITHHYIFSIITHHYFFS--IITHHFFFSIITHHFFFSIITHHF 991
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -3
Query: 517 YYIIIVNYYCVAVHYYFFCQYIYSFTYFFL*FTNKFLNIKLGHHYSIWI 371
++ II ++Y ++ Y + I + Y F FT+ + + HHYS I
Sbjct: 1091 FFSIITHHYFFSIITYHYFFVIITHHYIFSIFTHHYFFSIITHHYSFVI 1139
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = -3
Query: 517 YYIIIVNYYC--VAVHYYFFCQYIYSFTYFFL*FTNKFLNIKLGHHYSIWIYNN 362
+++II ++Y + H+ FF I + YFF T + + + HHY I+ +
Sbjct: 1073 FFVIITHHYIFPIITHHDFFS--IITHHYFFSIITYHYFFVIITHHYIFSIFTH 1124
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 10/62 (16%)
Frame = -3
Query: 538 YNVFDERYYIIIVN---YYCVAVHYYFFC----QYIYSFT---YFFL*FTNKFLNIKLGH 389
+++ Y+ I+ ++ + H+YFF YI+S YFF T+ F + H
Sbjct: 921 FSIITHHYFFSIITDHYFFSIITHHYFFVIITHHYIFSIITHHYFFSIITHHFFFSIITH 980
Query: 388 HY 383
H+
Sbjct: 981 HF 982
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/55 (23%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = -3
Query: 538 YNVFDERYYIIIVN---YYCVAVHYYFFCQYIYSFTYFFL*FTNKFLNIKLGHHY 383
+++ ++ I+ ++ + H+YFF I + +FF T+ F + HHY
Sbjct: 975 FSIITHHFFFSIITHHFFFSIITHHYFFS--IITHHFFFSIITHHFFFSIITHHY 1027
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/55 (21%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = -3
Query: 538 YNVFDERYYIIIVN---YYCVAVHYYFFCQYIYSFTYFFL*FTNKFLNIKLGHHY 383
+++ ++ I+ ++ + H+YFF I + YFF+ T+ + + HH+
Sbjct: 1002 FSIITHHFFFSIITHHFFFSIITHHYFFS--IITHHYFFVIITHHYFFSIITHHF 1054
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = -3
Query: 538 YNVFDERYYI-IIVNYY--CVAVHYYFFCQYIYSFTYFFL*FTNKFLNIKLGHHY 383
+++ Y+ II ++Y + H+YFF I + +FF T+ + + HHY
Sbjct: 1020 FSIITHHYFFSIITHHYFFVIITHHYFFS--IITHHFFFSIITDHYFFSIITHHY 1072
>SB_12991| Best HMM Match : TP2 (HMM E-Value=1.4)
Length = 296
Score = 30.7 bits (66), Expect = 1.1
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -3
Query: 517 YYIIIVNYYCVAVHYYFFCQYIYSFTYFF 431
YY YY HYY++ Y Y + Y++
Sbjct: 266 YYYYYYYYYYYYYHYYYYYYYYYYYYYYY 294
Score = 28.7 bits (61), Expect = 4.4
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = -3
Query: 517 YYIIIVNYYCVAVHYYFFCQYIYSFTYFF 431
YY YY +YY++ Y Y + Y++
Sbjct: 260 YYYYYYYYYYYYYYYYYYYHYYYYYYYYY 288
Score = 27.9 bits (59), Expect = 7.6
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = -3
Query: 517 YYIIIVNYYCVAVHYYFFCQYIYSFTYFF 431
YY YY +YY++ Y Y + Y++
Sbjct: 261 YYYYYYYYYYYYYYYYYYHYYYYYYYYYY 289
>SB_37888| Best HMM Match : Glycos_transf_4 (HMM E-Value=4.1)
Length = 355
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = -3
Query: 541 TYNVFDERYYIIIVNYYCVAVHYYFFCQYIYSFTYFFL*FTNKFLNIKLGHHYSIWIYN 365
TYN+ +Y++ YCVA+ Y C+Y S + F I +IW YN
Sbjct: 265 TYNIARLCHYLLHKLCYCVALQYRSHCRYYTSCATVWHYNIAAFAIIYYTSCATIWHYN 323
>SB_5256| Best HMM Match : EGF_2 (HMM E-Value=5.1)
Length = 122
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = -3
Query: 586 YIHYTLQYRH*STQTTYNVFDERYYIIIVNYYCVAVHYYFFCQYIYSFTY-FFL*FTNKF 410
Y +Y Y + Y + YY+ + NYY +YY Y Y ++L N +
Sbjct: 23 YNYYLDVYNYYLDVYNYYLDVYNYYLDVYNYYLDVYNYYLDVYNYYLDVYNYYLDVYNYY 82
Query: 409 LNIKLGHHYSIWIYN 365
L++ ++Y + +YN
Sbjct: 83 LDV---YNYYLDVYN 94
Score = 28.7 bits (61), Expect = 4.4
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = -3
Query: 586 YIHYTLQYRH*STQTTYNVFDERYYIIIVNYYCVAVHYYFFCQYIYSFTY-FFL*FTNKF 410
Y +Y Y + Y + YY+ + NYY +YY Y Y ++L N +
Sbjct: 9 YNYYLDVYNYYLDIYNYYLDVYNYYLDVYNYYLDVYNYYLDVYNYYLDVYNYYLDVYNYY 68
Query: 409 LNIKLGHHYSIWIYN 365
L++ ++Y + +YN
Sbjct: 69 LDV---YNYYLDVYN 80
>SB_43520| Best HMM Match : RNase_PH (HMM E-Value=0.00011)
Length = 972
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/40 (32%), Positives = 17/40 (42%)
Frame = -3
Query: 553 STQTTYNVFDERYYIIIVNYYCVAVHYYFFCQYIYSFTYF 434
+T TT V Y YYC YY+ Y Y + Y+
Sbjct: 459 TTTTTAPVLRYCYCYCYCYYYCYCYCYYYCYYYCYCYCYY 498
>SB_59039| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 48
Score = 28.3 bits (60), Expect = 5.8
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = -3
Query: 517 YYIIIVNYYCVAVHYYFFCQYIYSFTYFF 431
YY YY +YY++ Y Y + Y++
Sbjct: 18 YYYYYYYYYYYYYYYYYYYYYYYYYYYYY 46
Score = 28.3 bits (60), Expect = 5.8
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = -3
Query: 517 YYIIIVNYYCVAVHYYFFCQYIYSFTYFF 431
YY YY +YY++ Y Y + Y++
Sbjct: 19 YYYYYYYYYYYYYYYYYYYYYYYYYYYYY 47
Score = 28.3 bits (60), Expect = 5.8
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = -3
Query: 517 YYIIIVNYYCVAVHYYFFCQYIYSFTYFF 431
YY YY +YY++ Y Y + Y++
Sbjct: 20 YYYYYYYYYYYYYYYYYYYYYYYYYYYYY 48
Score = 27.9 bits (59), Expect = 7.6
Identities = 9/34 (26%), Positives = 16/34 (47%)
Frame = -3
Query: 532 VFDERYYIIIVNYYCVAVHYYFFCQYIYSFTYFF 431
+F Y YY +YY++ Y Y + Y++
Sbjct: 11 IFPHNYAYYYYYYYYYYYYYYYYYYYYYYYYYYY 44
>SB_18244| Best HMM Match : Fukutin-related (HMM E-Value=3.7)
Length = 540
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = -3
Query: 592 SRYIHYTLQYRH*STQTTYNVFDERYYIIIVNYYCVAVHYY-FFCQYIYSFTYFFL*FTN 416
+RY Y +Y T Y+V+ RY++ + Y+ Y+ + +Y T + + T
Sbjct: 219 TRYHVYMTRYH--VYMTRYHVYMTRYHVYMTRYHVYMTRYHVYMTRYHVYMTRYHVYMTR 276
Query: 415 KFLNI 401
LN+
Sbjct: 277 YHLNL 281
>SB_54952| Best HMM Match : 7tm_1 (HMM E-Value=7.2e-16)
Length = 357
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = -3
Query: 502 VNYYCVAVHYYFFCQYIYSFTYFFL*FTNKFLNIKLGHHYS 380
++Y +V FFC Y+++F Y L F++ + Y+
Sbjct: 244 LSYMAASVILVFFCPYLFTFVYTSL-IVGNFIDTTIADEYT 283
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,968,007
Number of Sequences: 59808
Number of extensions: 289047
Number of successful extensions: 945
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 748
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1669334250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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