BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_D19
(654 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060751-1|AAL28299.1| 242|Drosophila melanogaster GH20208p pro... 29 4.2
AE014134-1569|AAF52715.1| 242|Drosophila melanogaster CG9483-PA... 29 4.2
>AY060751-1|AAL28299.1| 242|Drosophila melanogaster GH20208p
protein.
Length = 242
Score = 29.5 bits (63), Expect = 4.2
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +1
Query: 253 PRFLVDFIFFFCCIFNVACVLHIIYFIFVIFLTIKYCYY 369
P F+V C+ +A ++ II+FI V+F+ + Y+
Sbjct: 140 PMFIVPGDLLLSCLVAIANIMMIIFFINVLFINYQGIYF 178
>AE014134-1569|AAF52715.1| 242|Drosophila melanogaster CG9483-PA
protein.
Length = 242
Score = 29.5 bits (63), Expect = 4.2
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +1
Query: 253 PRFLVDFIFFFCCIFNVACVLHIIYFIFVIFLTIKYCYY 369
P F+V C+ +A ++ II+FI V+F+ + Y+
Sbjct: 140 PMFIVPGDLLLSCLVAIANIMMIIFFINVLFINYQGIYF 178
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,456,802
Number of Sequences: 53049
Number of extensions: 395864
Number of successful extensions: 745
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 744
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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