Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_D16
         (477 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   2.5  
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    21   7.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.7  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 157 CTSCGCCVDTHITVDNI 107
           C  CG  +DT + VD+I
Sbjct: 637 CEKCGNKIDTSLFVDHI 653


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 56  PKHTLVAKHED 88
           P+HT V  HED
Sbjct: 109 PEHTYVKAHED 119


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 158 VHFLWLLC*HPHYC 117
           VH L+LLC +  +C
Sbjct: 158 VHLLFLLCIYHFFC 171



 Score = 20.6 bits (41), Expect = 7.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 158 VHFLWLLC*HPHYC 117
           +H L+LLC +  YC
Sbjct: 277 MHLLFLLCIYYFYC 290


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,805
Number of Sequences: 336
Number of extensions: 1692
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11141978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)