Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_D16
         (477 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132948-37|CAD31830.2|  410|Caenorhabditis elegans Hypothetical...    28   3.0  
U97006-3|AAC47966.1|  470|Caenorhabditis elegans Hypothetical pr...    27   5.3  
Z82082-5|CAE53733.1|   72|Caenorhabditis elegans Hypothetical pr...    27   9.2  
AF125461-6|AAK18992.1|   98|Caenorhabditis elegans Insulin relat...    27   9.2  

>AL132948-37|CAD31830.2|  410|Caenorhabditis elegans Hypothetical
           protein Y39B6A.38 protein.
          Length = 410

 Score = 28.3 bits (60), Expect = 3.0
 Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
 Frame = +3

Query: 135 TQQPQEVHTYCGRHLART---MADLCWEE-GVDKRSDAQF 242
           T++ QE +T C RHL +T    ADLC    G D+R  A F
Sbjct: 47  TEKQQEYYTKCFRHLIKTTQGAADLCGALCGADQRIVAFF 86


>U97006-3|AAC47966.1|  470|Caenorhabditis elegans Hypothetical
           protein C13F10.6 protein.
          Length = 470

 Score = 27.5 bits (58), Expect = 5.3
 Identities = 12/25 (48%), Positives = 19/25 (76%)
 Frame = +3

Query: 294 VDECCLRPCSVDVLLSYC*TTTLPN 368
           +++C L P S+D+L+S C +TTL N
Sbjct: 353 LNDCKLTPSSIDLLISRC-STTLRN 376


>Z82082-5|CAE53733.1|   72|Caenorhabditis elegans Hypothetical
           protein ZC334.8 protein.
          Length = 72

 Score = 26.6 bits (56), Expect = 9.2
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = +3

Query: 87  ILLAIALMLSTVMWVSTQQPQEVHTYCGRHLARTMADLC 203
           +L  I ++   ++ +S  +P E    CGR+L R + +LC
Sbjct: 1   MLFKIIILFFLLLQLSEAKP-EAQRRCGRYLIRFLGELC 38


>AF125461-6|AAK18992.1|   98|Caenorhabditis elegans Insulin related
           protein 32 protein.
          Length = 98

 Score = 26.6 bits (56), Expect = 9.2
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 165 CGRHLARTMADLCWEEGVDKRSD 233
           CGR L++T+ +LC E    K  D
Sbjct: 52  CGRRLSKTVTNLCVEMNPQKEED 74


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,330,684
Number of Sequences: 27780
Number of extensions: 169948
Number of successful extensions: 435
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 435
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 871571276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)