BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fcaL-P01_F_D14 (432 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AL110490-2|CAB54440.1| 91|Caenorhabditis elegans Hypothetical ... 140 5e-34 U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr... 28 2.5 Z66524-1|CAA91420.2| 500|Caenorhabditis elegans Hypothetical pr... 27 7.7 AF039048-9|AAB94233.1| 362|Caenorhabditis elegans Hypothetical ... 27 7.7 AF039048-8|AAT68896.1| 367|Caenorhabditis elegans Hypothetical ... 27 7.7 AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cycl... 27 7.7 AC006614-2|AAF39763.1| 254|Caenorhabditis elegans Drosophila od... 27 7.7 >AL110490-2|CAB54440.1| 91|Caenorhabditis elegans Hypothetical protein Y48B6A.2 protein. Length = 91 Score = 140 bits (338), Expect = 5e-34 Identities = 60/90 (66%), Positives = 73/90 (81%) Frame = +1 Query: 49 MAKRPKKVGITGKXGTRYGASLRKMVKKXEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 228 MAKR KKVGI GK GTRYGASLRKM KK EV QH++YTCSFCGK+AMKR GIW+C +C Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMAKKLEVAQHSRYTCSFCGKEAMKRKATGIWNCAKC 60 Query: 229 KRTVAGGAWVFSTTAASSCRSAVRRLREVK 318 + VAGGA+V+ T A++ RS +RRLR++K Sbjct: 61 HKVVAGGAYVYGTVTAATVRSTIRRLRDLK 90 >U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical protein C16A3.7 protein. Length = 1119 Score = 28.3 bits (60), Expect = 2.5 Identities = 11/28 (39%), Positives = 15/28 (53%) Frame = +1 Query: 145 QHAKYTCSFCGKDAMKRSCVGIWSCKRC 228 ++ KY C+ C R G+WSCK C Sbjct: 229 ENNKYECAICYTRITTRQ--GVWSCKTC 254 >Z66524-1|CAA91420.2| 500|Caenorhabditis elegans Hypothetical protein T13H5.4 protein. Length = 500 Score = 26.6 bits (56), Expect = 7.7 Identities = 16/54 (29%), Positives = 23/54 (42%) Frame = +3 Query: 15 SVNFCLGSVXQNGQTSQKGWNYWQXWHTLRCLST*NGQKXGSNPTRKVYLLILW 176 S C + + QK +N W+ H +RCL N +N T+ L LW Sbjct: 406 SCEICGNQTYKGPKAFQKHFNEWRHSHGMRCLGIPNTSHF-ANITKIKDALDLW 458 >AF039048-9|AAB94233.1| 362|Caenorhabditis elegans Hypothetical protein F16B4.2a protein. Length = 362 Score = 26.6 bits (56), Expect = 7.7 Identities = 9/27 (33%), Positives = 15/27 (55%) Frame = +1 Query: 190 KRSCVGIWSCKRCKRTVAGGAWVFSTT 270 K C+ W+C C +T+ +W F +T Sbjct: 333 KEKCILDWTCSTCDKTIE--SWYFRST 357 >AF039048-8|AAT68896.1| 367|Caenorhabditis elegans Hypothetical protein F16B4.2b protein. Length = 367 Score = 26.6 bits (56), Expect = 7.7 Identities = 9/27 (33%), Positives = 15/27 (55%) Frame = +1 Query: 190 KRSCVGIWSCKRCKRTVAGGAWVFSTT 270 K C+ W+C C +T+ +W F +T Sbjct: 338 KEKCILDWTCSTCDKTIE--SWYFRST 362 >AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cyclase protein 2 protein. Length = 1080 Score = 26.6 bits (56), Expect = 7.7 Identities = 10/28 (35%), Positives = 13/28 (46%) Frame = -3 Query: 118 YVERHRNVCXICQ*FQPFWDVWPFWXTD 35 Y +H NVC + F D W W T+ Sbjct: 841 YARQHENVCVMFASIPNFKDFWSEWDTN 868 >AC006614-2|AAF39763.1| 254|Caenorhabditis elegans Drosophila odd-skipped-like protein2 protein. Length = 254 Score = 26.6 bits (56), Expect = 7.7 Identities = 13/43 (30%), Positives = 18/43 (41%) Frame = +1 Query: 52 AKRPKKVGITGKXGTRYGASLRKMVKKXEVTQHAKYTCSFCGK 180 A RPKK I + S ++ + T Y+C CGK Sbjct: 117 AARPKKEFICKYCDRHFTKSYNLLIHERTHTDERPYSCDVCGK 159 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 7,856,710 Number of Sequences: 27780 Number of extensions: 154910 Number of successful extensions: 458 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 444 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 458 length of database: 12,740,198 effective HSP length: 75 effective length of database: 10,656,698 effective search space used: 724655464 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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