Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_D13
(615 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56255| Best HMM Match : Arf (HMM E-Value=0) 188 2e-48
SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.) 181 5e-46
SB_11310| Best HMM Match : Arf (HMM E-Value=0) 174 4e-44
SB_53421| Best HMM Match : Arf (HMM E-Value=0) 174 4e-44
SB_37042| Best HMM Match : Arf (HMM E-Value=0) 155 4e-38
SB_57342| Best HMM Match : Arf (HMM E-Value=0) 131 4e-31
SB_18358| Best HMM Match : Arf (HMM E-Value=0) 123 1e-28
SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.) 112 2e-25
SB_32972| Best HMM Match : Arf (HMM E-Value=2.66247e-44) 106 2e-23
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 103 2e-22
SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31) 97 1e-20
SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 2e-14
SB_2235| Best HMM Match : Arf (HMM E-Value=3.1e-13) 76 2e-14
SB_214| Best HMM Match : Arf (HMM E-Value=0) 68 7e-12
SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 9e-12
SB_16166| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 5e-11
SB_7588| Best HMM Match : DcpS (HMM E-Value=0) 64 9e-11
SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05) 46 2e-05
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 44 7e-05
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 43 2e-04
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 41 7e-04
SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 40 0.002
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 38 0.006
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 38 0.006
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 38 0.009
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.011
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 37 0.011
SB_1913| Best HMM Match : Arf (HMM E-Value=0.015) 37 0.015
SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.026
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 36 0.034
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 35 0.060
SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10) 35 0.060
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 34 0.080
SB_977| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_19713| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.42
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.56
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.56
SB_18911| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.56
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 31 0.56
SB_30236| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.98
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 30 1.3
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 30 1.3
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 30 1.3
SB_27093| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_7052| Best HMM Match : LRR_1 (HMM E-Value=2e-12) 30 1.3
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 30 1.7
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 29 2.3
SB_19075| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_36818| Best HMM Match : RVT_1 (HMM E-Value=8e-35) 29 4.0
SB_31784| Best HMM Match : RVT_1 (HMM E-Value=2e-35) 29 4.0
SB_28319| Best HMM Match : zf-C2H2 (HMM E-Value=0.012) 29 4.0
SB_10620| Best HMM Match : zf-C2H2 (HMM E-Value=0.012) 29 4.0
SB_50300| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_33829| Best HMM Match : Pkinase (HMM E-Value=0) 29 4.0
SB_42285| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30) 28 5.2
SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_8302| Best HMM Match : G-alpha (HMM E-Value=0) 28 5.2
SB_58217| Best HMM Match : Ras (HMM E-Value=0.00048) 28 6.9
SB_50666| Best HMM Match : ig (HMM E-Value=2.8e-20) 27 9.1
SB_17366| Best HMM Match : Filament (HMM E-Value=0.14) 27 9.1
SB_41185| Best HMM Match : RVT_1 (HMM E-Value=1.7e-10) 27 9.1
SB_19819| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
>SB_56255| Best HMM Match : Arf (HMM E-Value=0)
Length = 181
Score = 188 bits (459), Expect = 2e-48
Identities = 88/166 (53%), Positives = 125/166 (75%), Gaps = 1/166 (0%)
Frame = +1
Query: 118 GLLISKIWS-LFGNEEHKLVLVGLDNAGKTTILYQLLLGEAVHTRPTIGSNVEEVVWKNL 294
G + +K+++ LFG +E ++++VGLD AGKTTILY+L LGE V T PTIG NVE V +KN+
Sbjct: 2 GGMFAKLFAGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNI 61
Query: 295 RFVMWDLGGQQSLRSAWNTYYTNSEFVIMVIDSTDRQRLGISREELHRMLVHEELSKACL 474
F +WD+GGQ +R W Y+ N++ +I V+DS DR+R+G +REEL+RML +EL A L
Sbjct: 62 SFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVGEAREELNRMLNEDELRDAVL 121
Query: 475 LVFANKQDVKGSMTAAEISEQLXLTSIKQHPWHIQACCALTGEGLH 612
LVFANKQD+ +M AAEI+++L L S++ W+IQA CA +G+GL+
Sbjct: 122 LVFANKQDLPNAMNAAEITDKLGLHSLRNRQWYIQATCATSGDGLY 167
>SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 181 bits (440), Expect = 5e-46
Identities = 84/166 (50%), Positives = 121/166 (72%), Gaps = 1/166 (0%)
Frame = +1
Query: 118 GLLISKIWS-LFGNEEHKLVLVGLDNAGKTTILYQLLLGEAVHTRPTIGSNVEEVVWKNL 294
GL IS +++ LFG ++ ++++VGLD AGKTTILY+L LGE V T PTIG NVE V +KN+
Sbjct: 2 GLTISSLFTRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVESVEYKNI 61
Query: 295 RFVMWDLGGQQSLRSAWNTYYTNSEFVIMVIDSTDRQRLGISREELHRMLVHEELSKACL 474
F +WD+GGQ +R W Y+ N++ +I V+DS DR+R+ S+EEL++ML +EL A +
Sbjct: 62 SFTVWDVGGQDKIRPLWRHYFQNTQGLIYVVDSNDRERVNESKEELNKMLQEDELKDAVV 121
Query: 475 LVFANKQDVKGSMTAAEISEQLXLTSIKQHPWHIQACCALTGEGLH 612
LV ANKQD+ +++ +EI+E+L L SI+ W+IQA CA G GL+
Sbjct: 122 LVMANKQDLPNALSVSEITEKLGLQSIRDRQWYIQAACATQGTGLY 167
>SB_11310| Best HMM Match : Arf (HMM E-Value=0)
Length = 255
Score = 174 bits (424), Expect = 4e-44
Identities = 80/163 (49%), Positives = 115/163 (70%)
Frame = +1
Query: 124 LISKIWSLFGNEEHKLVLVGLDNAGKTTILYQLLLGEAVHTRPTIGSNVEEVVWKNLRFV 303
++S L G +E +L++VGLD AGKTTILY L L E V+T PTIG NVE V +KN++F
Sbjct: 78 VLSLFRRLLGKDELRLLMVGLDAAGKTTILYHLKLDEPVNTIPTIGFNVEVVEYKNIKFT 137
Query: 304 MWDLGGQQSLRSAWNTYYTNSEFVIMVIDSTDRQRLGISREELHRMLVHEELSKACLLVF 483
+WD+GGQ +R W Y+ ++ +I V+DS DR R+ ++EEL ++L EEL +A LLV
Sbjct: 138 VWDIGGQDKIRLLWRLYFQETQGLIFVVDSNDRDRIQEAKEELFKLLKEEELKRAALLVL 197
Query: 484 ANKQDVKGSMTAAEISEQLXLTSIKQHPWHIQACCALTGEGLH 612
ANKQD+ SM+ E+SE+L L +++ W+IQA CAL G+G++
Sbjct: 198 ANKQDLPDSMSTTELSEKLSLHTLRSRNWYIQATCALKGQGVY 240
>SB_53421| Best HMM Match : Arf (HMM E-Value=0)
Length = 625
Score = 174 bits (424), Expect = 4e-44
Identities = 77/145 (53%), Positives = 103/145 (71%)
Frame = +1
Query: 175 LVGLDNAGKTTILYQLLLGEAVHTRPTIGSNVEEVVWKNLRFVMWDLGGQQSLRSAWNTY 354
++GLDNAGKTTILY+L L E V T PT+G NVE V +KN+ F +WD+GGQ +R+ W Y
Sbjct: 1 MIGLDNAGKTTILYRLKLEEVVSTVPTLGFNVETVTYKNISFTVWDIGGQDKIRALWRVY 60
Query: 355 YTNSEFVIMVIDSTDRQRLGISREELHRMLVHEELSKACLLVFANKQDVKGSMTAAEISE 534
Y + +I V+DS DR+R +R ELH++L EEL + LLV ANKQD+ +MTA+EI E
Sbjct: 61 YQGCQGIIFVVDSADRERAEEARNELHKLLAEEELQQVILLVIANKQDMANAMTASEIRE 120
Query: 535 QLXLTSIKQHPWHIQACCALTGEGL 609
+L L I+ PW +Q+ CA+ GEGL
Sbjct: 121 KLKLNEIRGRPWFVQSACAVKGEGL 145
>SB_37042| Best HMM Match : Arf (HMM E-Value=0)
Length = 188
Score = 155 bits (375), Expect = 4e-38
Identities = 75/169 (44%), Positives = 113/169 (66%), Gaps = 4/169 (2%)
Frame = +1
Query: 118 GLLISKIWSLF---GNEEHKLVLVGLDNAGKTTILYQLLLGEAVHTRPTIGSNVEEVV-W 285
GLL+SK+ +LF GN + ++V++GLD AGKTTILY+L L E V T PTIG NVE +
Sbjct: 2 GLLLSKVITLFSEFGNRQVRIVMLGLDAAGKTTILYKLKLKETVSTIPTIGFNVETLQPT 61
Query: 286 KNLRFVMWDLGGQQSLRSAWNTYYTNSEFVIMVIDSTDRQRLGISREELHRMLVHEELSK 465
KN+ +WD+GGQ +R W Y+ +E ++ V+DS+D R+ ++EELH +L +E
Sbjct: 62 KNVTLTIWDVGGQDKIRPLWRHYFQGTEGLLFVVDSSDVLRMPEAKEELHGVLDSDEFRD 121
Query: 466 ACLLVFANKQDVKGSMTAAEISEQLXLTSIKQHPWHIQACCALTGEGLH 612
++V ANKQD+ ++ A E+++ L L K++PWH+Q CA G+GL+
Sbjct: 122 VPVVVVANKQDLPNALKAGEMAKHLGLLQHKRNPWHVQEACATNGDGLY 170
>SB_57342| Best HMM Match : Arf (HMM E-Value=0)
Length = 457
Score = 131 bits (317), Expect = 4e-31
Identities = 62/139 (44%), Positives = 92/139 (66%), Gaps = 1/139 (0%)
Frame = +1
Query: 199 KTTILYQLLLGEAVHTRPTIGSNVEEVV-WKNLRFVMWDLGGQQSLRSAWNTYYTNSEFV 375
KTTILY+L L E V+T PT+ NVE + KN+ F +WD+GGQ +R W Y+ +E +
Sbjct: 122 KTTILYKLKLKETVNTVPTVAFNVETISPCKNITFSVWDIGGQDKIRRLWRHYFQGAEGI 181
Query: 376 IMVIDSTDRQRLGISREELHRMLVHEELSKACLLVFANKQDVKGSMTAAEISEQLXLTSI 555
I V+DS D++R+ REEL R+L H EL+ ++V ANKQD+ G++ +++E+L L
Sbjct: 182 IFVVDSADKERIFEVREELTRVLQHSELNGVPVVVVANKQDLLGAIGPDKMAEELSLYKH 241
Query: 556 KQHPWHIQACCALTGEGLH 612
++PW IQ CA G+GL+
Sbjct: 242 TKNPWRIQGTCATAGDGLY 260
>SB_18358| Best HMM Match : Arf (HMM E-Value=0)
Length = 214
Score = 123 bits (296), Expect = 1e-28
Identities = 62/149 (41%), Positives = 93/149 (62%), Gaps = 2/149 (1%)
Frame = +1
Query: 169 LVLVGLDNAGKTTILYQLLLGEAVHTRPTIGSNVEEV-VWKNLRFVMWDLGGQQSLRSAW 345
+V++GLD +GKT+ILY+ E V+T PT NVE + +K +RF +WD+GG++ R W
Sbjct: 24 VVMLGLDKSGKTSILYRNKFREYVNTVPTTAFNVETIRPFKGIRFKVWDIGGREQNRPLW 83
Query: 346 NTYYTNSEFVIMVIDSTDRQRLGISREELHRMLVHEELSKACLLVFANKQDVKGSMTAAE 525
Y ++ VI V+DST +L +R+EL +L +L+ A +L+FANKQD ++ E
Sbjct: 84 KAYARQTDAVIYVVDSTSAGKLEEARDELFNLLNSAQLNGAPILIFANKQDCPNAIPPRE 143
Query: 526 ISEQLXLTSIK-QHPWHIQACCALTGEGL 609
I+ L L + +H W +Q C AL GEGL
Sbjct: 144 ITHMLSLHDLNARHLWFVQPCSALLGEGL 172
>SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1325
Score = 112 bits (270), Expect = 2e-25
Identities = 62/153 (40%), Positives = 87/153 (56%), Gaps = 1/153 (0%)
Frame = +1
Query: 154 NEEHKLVLVGLDNAGKTTILYQLLLGEAVHTRPTIGSNVEEVVWK-NLRFVMWDLGGQQS 330
+ E +++L+GLDN+GKTTIL L + +H PT G N++ V K R +WD+GGQ+
Sbjct: 15 DREMRILLLGLDNSGKTTILKSLASEDVLHITPTQGFNIKSVQSKGGFRLNVWDIGGQRK 74
Query: 331 LRSAWNTYYTNSEFVIMVIDSTDRQRLGISREELHRMLVHEELSKACLLVFANKQDVKGS 510
+R W Y+ N++ + EL +L E+L LLVFANKQD+ +
Sbjct: 75 IRPYWKNYFENTDIL-----------------ELDELLEEEKLIGVPLLVFANKQDLMNA 117
Query: 511 MTAAEISEQLXLTSIKQHPWHIQACCALTGEGL 609
T AEIS L L +I+ W IQ C ALTGEG+
Sbjct: 118 ATPAEISSNLGLNTIRSRGWQIQGCSALTGEGV 150
>SB_32972| Best HMM Match : Arf (HMM E-Value=2.66247e-44)
Length = 257
Score = 106 bits (254), Expect = 2e-23
Identities = 48/97 (49%), Positives = 69/97 (71%)
Frame = +1
Query: 319 GQQSLRSAWNTYYTNSEFVIMVIDSTDRQRLGISREELHRMLVHEELSKACLLVFANKQD 498
GQ S+R W YY N++ VI V+DS D+ R+GIS++EL ML +EL KA L+VFANKQD
Sbjct: 155 GQTSIRPYWRCYYANTDAVIYVVDSVDKDRIGISKQELLAMLEEDELKKAILIVFANKQD 214
Query: 499 VKGSMTAAEISEQLXLTSIKQHPWHIQACCALTGEGL 609
++G+M+++E+S L L+++K W I A+ GEGL
Sbjct: 215 MEGAMSSSEVSNALGLSALKSRTWAIFKTSAVKGEGL 251
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 103 bits (246), Expect = 2e-22
Identities = 53/150 (35%), Positives = 83/150 (55%), Gaps = 1/150 (0%)
Frame = +1
Query: 142 SLFGNEEHKLVLVGLDNAGKTTILYQLLLGEAVHTR-PTIGSNVEEVVWKNLRFVMWDLG 318
SLF EE +L LVGL +GKTT + + G+ PT+G N+ +V N+ +WD+G
Sbjct: 14 SLFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVSKGNVTIKVWDIG 73
Query: 319 GQQSLRSAWNTYYTNSEFVIMVIDSTDRQRLGISREELHRMLVHEELSKACLLVFANKQD 498
GQ RS W Y ++ ++D+ D +L S+ ELH +L +L+ +LV NK+D
Sbjct: 74 GQPRFRSMWERYCRGVNCIVYMVDAADHDKLEASKNELHNLLEKPQLAGIPILVLGNKKD 133
Query: 499 VKGSMTAAEISEQLXLTSIKQHPWHIQACC 588
+ S+ E+ E+L LTS++ + CC
Sbjct: 134 LPNSLDEKELVERLNLTSVQDR----EICC 159
>SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31)
Length = 650
Score = 97.1 bits (231), Expect = 1e-20
Identities = 43/82 (52%), Positives = 57/82 (69%)
Frame = +1
Query: 250 PTIGSNVEEVVWKNLRFVMWDLGGQQSLRSAWNTYYTNSEFVIMVIDSTDRQRLGISREE 429
P G NVE V +KN+ F +WD+GGQ +R W Y+ N++ +I V+DS DR+R G ++EE
Sbjct: 496 PVQGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERAGEAKEE 555
Query: 430 LHRMLVHEELSKACLLVFANKQ 495
L RML +EL A LLVFANKQ
Sbjct: 556 LSRMLAEDELRDAVLLVFANKQ 577
>SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 76.6 bits (180), Expect = 2e-14
Identities = 42/148 (28%), Positives = 77/148 (52%), Gaps = 3/148 (2%)
Frame = +1
Query: 160 EHKLVLVGLDNAGKTTILYQLLLGEAVH---TRPTIGSNVEEVVWKNLRFVMWDLGGQQS 330
E +++++GLD +GK+ L L G++ T T G NV + L +W++GG +
Sbjct: 166 EKRILVLGLDGSGKSVFLSALSQGDSSKRPSTTKTEGFNVVCLTTDGLNLNIWEIGGDEK 225
Query: 331 LRSAWNTYYTNSEFVIMVIDSTDRQRLGISREELHRMLVHEELSKACLLVFANKQDVKGS 510
R+ W + +++ ++ V+DS+D R SR+ L +L + L+ +L+ A+KQD+ G+
Sbjct: 226 YRAYWPNFIADTQLLVYVVDSSDPDRFNESRDNLKSLLSNSLLNGVPVLLVASKQDLPGA 285
Query: 511 MTAAEISEQLXLTSIKQHPWHIQACCAL 594
+EI L + H C A+
Sbjct: 286 RQLSEIVSVLGINEDWVSDDHKSGCVAI 313
>SB_2235| Best HMM Match : Arf (HMM E-Value=3.1e-13)
Length = 334
Score = 76.2 bits (179), Expect = 2e-14
Identities = 42/109 (38%), Positives = 67/109 (61%), Gaps = 1/109 (0%)
Frame = +1
Query: 286 KNLRFVMWDLGGQQSLRSAWNTYYTNSEF-VIMVIDSTDRQRLGISREELHRMLVHEELS 462
KN+ F +WD+GGQ +LR Y+T+ + +I V+DSTD QRL + +L +L + +
Sbjct: 16 KNVHFAVWDIGGQPNLRKH---YFTDDKSGLIYVVDSTDIQRL--NEAQLLGILQEKVMV 70
Query: 463 KACLLVFANKQDVKGSMTAAEISEQLXLTSIKQHPWHIQACCALTGEGL 609
++V ANKQD+ + A +I+E L L +K++P H+Q A G+GL
Sbjct: 71 DVPVVVVANKQDLPNVLKAGDIAEHLGLLKLKRNPLHVQEAFASNGDGL 119
>SB_214| Best HMM Match : Arf (HMM E-Value=0)
Length = 148
Score = 67.7 bits (158), Expect = 7e-12
Identities = 32/99 (32%), Positives = 52/99 (52%)
Frame = +1
Query: 250 PTIGSNVEEVVWKNLRFVMWDLGGQQSLRSAWNTYYTNSEFVIMVIDSTDRQRLGISREE 429
PT+ EE+ +RF +DLGG + R W Y+ ++ +ID D +RL S++E
Sbjct: 6 PTLHPTSEELSMGGMRFTTFDLGGHRQARRIWKDYFPAVNGIVFIIDCADFERLAESKKE 65
Query: 430 LHRMLVHEELSKACLLVFANKQDVKGSMTAAEISEQLXL 546
L +L E+LS +L+ NK D+ G++ I + L
Sbjct: 66 LDSLLADEQLSSCPVLILGNKIDIPGAVGEDYIRQNFGL 104
>SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 67.3 bits (157), Expect = 9e-12
Identities = 47/136 (34%), Positives = 74/136 (54%), Gaps = 9/136 (6%)
Frame = +1
Query: 124 LISKIWS-LFGNEEHKLVLVGLDNAGKTTILYQLL--LGEAVHTRP------TIGSNVEE 276
L+S +W LF +E+ ++++GLDNAGKTT+L Q+ + + P T+G N+ +
Sbjct: 8 LLSGLWKYLFQKDEYFILILGLDNAGKTTLLEQIKRKFCKTYNGIPFEKITTTVGLNIGK 67
Query: 277 VVWKNLRFVMWDLGGQQSLRSAWNTYYTNSEFVIMVIDSTDRQRLGISREELHRMLVHEE 456
+ +++ + WDLGGQQ LR+ W+ S ++M R + EE L H+
Sbjct: 68 ITISHVKLMFWDLGGQQELRTLWDKVEVMSVKILMT-------RF-LPVEE---ALTHKA 116
Query: 457 LSKACLLVFANKQDVK 504
L LLV ANKQD +
Sbjct: 117 LEGVPLLVLANKQDAQ 132
>SB_16166| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 64.9 bits (151), Expect = 5e-11
Identities = 29/42 (69%), Positives = 33/42 (78%)
Frame = +1
Query: 454 ELSKACLLVFANKQDVKGSMTAAEISEQLXLTSIKQHPWHIQ 579
EL +A LL+ ANKQD+KGSM+ AEISEQL L IK H WHIQ
Sbjct: 47 ELKQAALLILANKQDIKGSMSVAEISEQLNLACIKDHGWHIQ 88
>SB_7588| Best HMM Match : DcpS (HMM E-Value=0)
Length = 446
Score = 64.1 bits (149), Expect = 9e-11
Identities = 26/64 (40%), Positives = 41/64 (64%)
Frame = +1
Query: 310 DLGGQQSLRSAWNTYYTNSEFVIMVIDSTDRQRLGISREELHRMLVHEELSKACLLVFAN 489
D+GGQ +R W Y+ S+ +I V+D DR R+ +R+EL R++ E+ +L+FAN
Sbjct: 143 DVGGQDKIRPLWRHYFAGSQGLIFVVDCADRDRIDEARKELQRIINDREMKDVIILIFAN 202
Query: 490 KQDV 501
KQD+
Sbjct: 203 KQDL 206
>SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 56.0 bits (129), Expect = 2e-08
Identities = 23/50 (46%), Positives = 36/50 (72%)
Frame = +1
Query: 304 MWDLGGQQSLRSAWNTYYTNSEFVIMVIDSTDRQRLGISREELHRMLVHE 453
+WD+GGQ+SLRS W Y+ +++ +I V+DS D++RL + EL +LV E
Sbjct: 6 IWDVGGQRSLRSYWRNYFESTDGLIWVVDSADQRRLADCKMELQGLLVEE 55
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 49.6 bits (113), Expect = 2e-06
Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 6/121 (4%)
Frame = +1
Query: 166 KLVLVGLDNAGKTTILYQLLLGEAVHTRPT-----IGSNVEEVVWKNLRFVMWDLGGQQS 330
K+++VG GKT+++ + G + +G+ V ++ ++ WD GQ+
Sbjct: 13 KVLVVGDPGVGKTSLIRRFTKGYFCDNSSSTVGVDVGTRVLDIHGDRVKLQCWDTAGQEK 72
Query: 331 LRSAWNTYYTNSEFVIMVIDSTDRQRLGISREELHRMLVHEELSKACLLVF-ANKQDVKG 507
R +YY N++ VI+V D T+R + L M V + +K L V NK D+KG
Sbjct: 73 FRGITQSYYRNADAVILVFDITNRGTFASIPQWL--MNVQKYTNKNILKVLVGNKTDLKG 130
Query: 508 S 510
+
Sbjct: 131 A 131
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 48.8 bits (111), Expect = 3e-06
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 8/120 (6%)
Frame = +1
Query: 166 KLVLVGLDNAGKTTILYQLLLGEAVHTR-PTIGSNVE----EVVWKNLRFVMWDLGGQQS 330
K++LVG N GKT ++ Q G + PTIG + +V + ++ +WD GQ+
Sbjct: 9 KIILVGDANVGKTCLVRQFTKGYFPPNQGPTIGVDFTIKTVDVDGEKVKLQIWDTAGQER 68
Query: 331 LRSAWNTYYTNSEFVIMVIDSTDRQRLGISREELHRML--VHEELSKACLL-VFANKQDV 501
RS +YY N++ VI+ D T+++ S E L + L + SK L+ + NK D+
Sbjct: 69 FRSITQSYYHNADGVIVTYDITNKK----SFESLPQWLDDTNRYTSKDVLIAIVGNKSDL 124
>SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05)
Length = 259
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +1
Query: 259 GSNVEEVVWKNLRFVMWDLGGQQSLRSAWNTYYTNSE 369
G NVE V ++L+F +WD+GG Q LR W YY N++
Sbjct: 222 GFNVETVEHRSLKFTIWDVGGLQKLRPLWRHYYLNTQ 258
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 44.4 bits (100), Expect = 7e-05
Identities = 31/119 (26%), Positives = 58/119 (48%), Gaps = 5/119 (4%)
Frame = +1
Query: 163 HKLVLVGLDNAGKTTILYQLLLGEA-VHTRPTIGSNVE----EVVWKNLRFVMWDLGGQQ 327
+K+VL+G GK+++L + E + ++ TIG +V K ++ +WD GQ+
Sbjct: 13 YKIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGKIIKAQVWDTAGQE 72
Query: 328 SLRSAWNTYYTNSEFVIMVIDSTDRQRLGISREELHRMLVHEELSKACLLVFANKQDVK 504
R+ + YY + ++V D T ++ L + H + + +LV NK D+K
Sbjct: 73 RYRAITSAYYRGAVGAVLVYDLTKQKTFQDVERWLLEVREHADPTIVVMLV-GNKCDLK 130
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/87 (26%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Frame = +1
Query: 160 EHKLVLVGLDNAGKTTILYQLLLGEAV-HTRPTIGSNVEEVVWK-----NLRFVMWDLGG 321
+ +++L+G GK+++L Q G+ ++ PT+G + V + ++ +WD G
Sbjct: 13 QFRIILIGDSTVGKSSLLRQFTEGQFFENSDPTVGVDFHVRVLELKGDVRIKLQIWDTAG 72
Query: 322 QQSLRSAWNTYYTNSEFVIMVIDSTDR 402
Q+ RS +YY N+ +++ D T+R
Sbjct: 73 QERFRSITYSYYRNTVGCLIIYDITNR 99
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 42.7 bits (96), Expect = 2e-04
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Frame = +1
Query: 166 KLVLVGLDNAGKTTILYQLLLGE-AVHTRPTIGSNV-EEVVWKNLRFV---MWDLGGQQS 330
K++++G N GKT + Y+L G+ T TIG + E+ + N FV +WD GQ+
Sbjct: 48 KIIIIGDSNVGKTCLAYRLCTGKFPERTETTIGVDFWEKSLELNGEFVKLQLWDTAGQER 107
Query: 331 LRSAWNT-YYTNSEFVIMVIDST 396
R + YY N V+ + D T
Sbjct: 108 FRKSMVCHYYRNVNAVVFMYDIT 130
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 41.9 bits (94), Expect = 4e-04
Identities = 31/117 (26%), Positives = 58/117 (49%), Gaps = 5/117 (4%)
Frame = +1
Query: 163 HKLVLVGLDNAGKTTILYQLLLGEAVHT-RPTIGSN--VEEVVWKN--LRFVMWDLGGQQ 327
HK+V +G GK+++ + + +PTIG + + V+ + +R +WD GQ+
Sbjct: 164 HKIVFLGDQGVGKSSLAGRFIYDIFEEKYQPTIGIDFMTKTVLLDDFEVRLQIWDTAGQE 223
Query: 328 SLRSAWNTYYTNSEFVIMVIDSTDRQRLGISREELHRMLVHEELSKACLLVFANKQD 498
R ++Y +SE ++V D T+ S + +M+ E KA +++ NK D
Sbjct: 224 RFRCLIHSYIRDSEAALIVFDITNYTSFE-SVGDWVKMVRDERGEKAVIIIVGNKMD 279
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 41.1 bits (92), Expect = 7e-04
Identities = 41/154 (26%), Positives = 66/154 (42%), Gaps = 6/154 (3%)
Frame = +1
Query: 166 KLVLVGLDNAGKTTILYQLLLGEAVH-TRPTIG----SNVEEVVWKNLRFVMWDLGGQQS 330
K+VL+G GKT++ Y+L R TIG S ++ K + +WD G +
Sbjct: 13 KVVLLGEAGVGKTSLFYRLKENHFTPGRRNTIGIDSCSKFVKIGEKQVTLSVWDTAGVER 72
Query: 331 LRSAWNTYYTNSEFVIMVIDSTDRQRLGISREELHRMLVHEELSKACLLVFANKQDVKGS 510
R+ YY + I++ + D L +H E A ++ ANK D+
Sbjct: 73 FRTVTKNYYRGAHACILMFNVDDPGSLQYLLHWIHD--TDEFCPDALKVLVANKIDLDEQ 130
Query: 511 MTAAEISEQLXLTSIKQHPWHIQ-ACCALTGEGL 609
+T + +L +S H H+ A TGEG+
Sbjct: 131 VTTESV--ELFASS---HECHLTFRISAKTGEGI 159
>SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2229
Score = 39.9 bits (89), Expect = 0.002
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Frame = +1
Query: 124 LISKIWSLFGNEEHKLVLVGLDNAGKTTILYQLLLGEAVH-TRPTIGSNVEE------VV 282
L +K+ S G KL+LVG + GKTT++++L+L T G ++EE +
Sbjct: 539 LRAKLRSARGYYSMKLMLVGREAQGKTTLMHRLMLDNTYFINSATNGISMEEFRLKKDFL 598
Query: 283 WKNLRFVMWDLGGQQSLRSAWNTYYTNSEFVIMV 384
+ F +WD GGQ+ + + + I+V
Sbjct: 599 HREFIFKIWDFGGQEDYYATHQCFISTLSLYILV 632
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 39.5 bits (88), Expect = 0.002
Identities = 39/146 (26%), Positives = 70/146 (47%), Gaps = 15/146 (10%)
Frame = +1
Query: 166 KLVLVGLDNAGKTTILYQLLLGEAVHTR-PTIGSNVE----EVVWKNLRFVMWDLGGQQS 330
KL+L+G GK+++L + +T TIG + + V K ++ +WD GQ+
Sbjct: 10 KLLLIGDSGVGKSSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKTIKLQIWDTAGQER 69
Query: 331 LRSAWNTYYTNSEFVIMVIDSTDRQRLGISREELHRMLVHEELSK-AC----LLVFANKQ 495
R+ YY ++ ++++ D + S LH EE+S+ AC ++ NK
Sbjct: 70 FRTLTTAYYRSAHGIVLIYDVNE------SETFLHLSQWLEEVSEYACEGVNTILVGNKC 123
Query: 496 DV-----KGSMTAAEISEQLXLTSIK 558
D+ G TA E +E+L ++ I+
Sbjct: 124 DLIDCRQVGYNTAKEFAEKLDISFIE 149
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 39.1 bits (87), Expect = 0.003
Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 5/120 (4%)
Frame = +1
Query: 166 KLVLVGLDNAGKTTILYQLLLGEA-VHTRPTIGSNVE----EVVWKNLRFVMWDLGGQQS 330
K+++VG GK+++L + TIG + + V + +WD GQ+
Sbjct: 10 KILIVGESGVGKSSLLLRFTDDTFDPDIGATIGVDFKVKTLTVEGNKAKLAIWDTAGQER 69
Query: 331 LRSAWNTYYTNSEFVIMVIDSTDRQRLGISREELHRMLVHEELSKACLLVFANKQDVKGS 510
R+ +YY ++ VI+V D+ R+ E L+ + ++ ++ NK D S
Sbjct: 70 FRTLTPSYYRGAQGVILVYDTNSRETFDKLEEWLNEVEMYSTKKDIVKMLVGNKIDKHSS 129
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 37.9 bits (84), Expect = 0.006
Identities = 31/125 (24%), Positives = 56/125 (44%), Gaps = 9/125 (7%)
Frame = +1
Query: 178 VGLDNAGKTTILYQLLLGEAVHTR-PTIGSNVEEVVWKN----LRFVMWDLGGQQSLRSA 342
VG GKTT + + L GE T+G V +++ ++F +WD GQ+
Sbjct: 38 VGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLIFFTSRGPIKFNVWDTAGQEKFGGL 97
Query: 343 WNTYYTNSEFVIMVIDSTDRQRLGISREELHRMLVHEELSKAC----LLVFANKQDVKGS 510
+ YY + I++ D T R ++ + + H +L + C +++ NK D+K
Sbjct: 98 RDGYYIQGQCAIIMFDVTSR----VTYKNVPNW--HRDLERVCENIPIVLCGNKVDIKDR 151
Query: 511 MTAAE 525
A+
Sbjct: 152 KVKAK 156
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 37.9 bits (84), Expect = 0.006
Identities = 24/86 (27%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Frame = +1
Query: 160 EHKLVLVGLDNAGKTTILYQLLLGEA-VHTRPTIGSN-VEEVVWKN---LRFVMWDLGGQ 324
+ KLVL+G GK++++ + + G+ + TIG+ + + V + ++F +WD GQ
Sbjct: 21 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQ 80
Query: 325 QSLRSAWNTYYTNSEFVIMVIDSTDR 402
+ S YY ++ I+V D T++
Sbjct: 81 ERYHSLAPMYYRGAQAAIVVYDITNQ 106
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 37.5 bits (83), Expect = 0.009
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +1
Query: 259 GSNVEEVVWKNLRFVMWDLGGQQSLRSAWNTYYTNSEFVIMVIDSTDRQ 405
GS + V K+++ +WD GQ+ RS +YY + ++V D + R+
Sbjct: 133 GSKIVNVGGKSVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDISSRE 181
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 37.1 bits (82), Expect = 0.011
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +1
Query: 274 EVVWKNLRFVMWDLGGQQSLRSAWNTYYTNSEFVIMVIDSTDRQ 405
E+ K ++ +WD GQ+ R+ ++YY + +I+V D TD++
Sbjct: 72 ELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQE 115
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 37.1 bits (82), Expect = 0.011
Identities = 37/163 (22%), Positives = 76/163 (46%), Gaps = 11/163 (6%)
Frame = +1
Query: 154 NEEHKLVLVGLDNAGKTTILYQLLLGEAVHTR-PTIGSNVEE--VVWKNLRFV-MWDLGG 321
++++KLV+VG GK+ + Q + V PTI + + V+ + + + + D G
Sbjct: 9 DKQYKLVVVGGGGVGKSALTIQFIQSHFVSDYDPTIEDSYRKQCVIDERVAHLDILDTAG 68
Query: 322 QQSLRSAWNTYYTNSEFVIMVIDSTDRQRLGISREELHRMLVHEELSKACLLVFANKQDV 501
Q+ + Y + E ++V TDR + +++L ++ ++ +++ NK D+
Sbjct: 69 QEEFSAMREQYMRSGEGFLLVFSVTDRSSFEEINKFYNQILRVKDRTEFPMIICGNKSDL 128
Query: 502 KGSMTAA-----EISEQL--XLTSIKQHPWHIQACCALTGEGL 609
+ T + E++ QL + + +QA AL G GL
Sbjct: 129 EYERTVSTAEGQELARQLREIIKLVPDRSPSLQAQEALLGLGL 171
>SB_1913| Best HMM Match : Arf (HMM E-Value=0.015)
Length = 777
Score = 36.7 bits (81), Expect = 0.015
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +1
Query: 472 LLVFANKQDVKGSMTAAEISEQLXLTSIKQHPWHI 576
+L FANK D++ ++++ + + L L +IK PWHI
Sbjct: 54 VLFFANKMDLRDALSSIKCTNLLGLEAIKDKPWHI 88
>SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 35.9 bits (79), Expect = 0.026
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 10/106 (9%)
Frame = +1
Query: 157 EEHKLVLVGLDNAGKTTILYQLLLGEAVHTRP-TIGSNVEEVVW---------KNLRFVM 306
E+ ++ +VG GKT++++ + E++ + TIG VE ++ K
Sbjct: 5 EKVRIAVVGDSGVGKTSLVHLICHEESISSAAWTIGCTVEVKLYDYKEGMPGGKTFFLEF 64
Query: 307 WDLGGQQSLRSAWNTYYTNSEFVIMVIDSTDRQRLGISREELHRML 444
WD+GG + ++ + +Y +I+V D T+R+ R+ L +L
Sbjct: 65 WDIGGSANHENSRSIFYNGINGLILVHDLTNRKSFTNLRKWLAEVL 110
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 35.5 bits (78), Expect = 0.034
Identities = 18/71 (25%), Positives = 32/71 (45%)
Frame = +1
Query: 286 KNLRFVMWDLGGQQSLRSAWNTYYTNSEFVIMVIDSTDRQRLGISREELHRMLVHEELSK 465
+ ++ +WD GQ+ R+ +TYY + VI+V D T + LH + +
Sbjct: 24 EKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSADTFVNVKRWLHE--IDQNCDD 81
Query: 466 ACLLVFANKQD 498
++ NK D
Sbjct: 82 VIRILVGNKDD 92
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 34.7 bits (76), Expect = 0.060
Identities = 29/124 (23%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
Frame = +1
Query: 166 KLVLVGLDNAGKTTILYQLLLGE---AVHTRPTIGSNVEEVV--WKNLRFVMWDLGGQQS 330
K+VL G GK++ + +L A+++ + ++ +V K +WD GQ+
Sbjct: 444 KIVLAGDAAVGKSSFILRLCRNRFHSALNSTLGVDFQMKTLVVDGKTYALQLWDTAGQER 503
Query: 331 LRSAWNTYYTNSEFVIMVIDSTDRQRLGISREELHRMLVHEELSKAC-LLVFANKQDVKG 507
RS +Y+ ++ V+++ D T R+ + + E SK +++ NK D++
Sbjct: 504 FRSIAKSYFRKADGVLLLYDVTCETSFLDVRDWVE--AIEESCSKPVPIMLCGNKIDIRQ 561
Query: 508 SMTA 519
S A
Sbjct: 562 SAAA 565
>SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10)
Length = 159
Score = 34.7 bits (76), Expect = 0.060
Identities = 29/123 (23%), Positives = 56/123 (45%), Gaps = 7/123 (5%)
Frame = +1
Query: 154 NEEHKLVLVGLDNAGKTTILYQLLLGEAVHTRPTIGSNVEE-------VVWKNLRFVMWD 312
+E +K+ L G GKT+I +L E ++ ++++ + K L+ +WD
Sbjct: 6 DEVYKIALCGKMGVGKTSIYTRLSTDEFPEEEQSL-HHIDQCFIPLVCICNKKLKIHLWD 64
Query: 313 LGGQQSLRSAWNTYYTNSEFVIMVIDSTDRQRLGISREELHRMLVHEELSKACLLVFANK 492
G + S +Y+NS+ V++V L +E V+ +K +++ ANK
Sbjct: 65 TLGMEEYESLTRNHYSNSKVVLVVYSLDLPDSLAQVKECTQSAQVNAPAAK--IVLVANK 122
Query: 493 QDV 501
D+
Sbjct: 123 MDL 125
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 34.3 bits (75), Expect = 0.080
Identities = 21/85 (24%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Frame = +1
Query: 166 KLVLVGLDNAGKTTILYQLLLGEAVHTR-PTIGSNVE-EVVWKN---LRFVMWDLGGQQS 330
KL+++G GKT+ L++ T+G + + + V++N ++ +WD GQ+
Sbjct: 23 KLLIIGNSAVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRNDKRVKLQIWDTAGQER 82
Query: 331 LRSAWNTYYTNSEFVIMVIDSTDRQ 405
R+ YY + I++ D T+ +
Sbjct: 83 YRTITTAYYRGAMGFILMYDITNEE 107
>SB_977| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 765
Score = 33.9 bits (74), Expect = 0.11
Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 1/98 (1%)
Frame = +1
Query: 154 NEEHKLVLVGLDNAGKTTILYQLLLGEAVHTR-PTIGSNVEEVVWKNLRFVMWDLGGQQS 330
N+ L LD G Y + + TR T G +K+L F M+D+GGQ+S
Sbjct: 149 NDSASYYLNALDRLGSPD--YVPTEQDVLRTRVKTTGIVETHFTFKDLHFKMFDVGGQRS 206
Query: 331 LRSAWNTYYTNSEFVIMVIDSTDRQRLGISREELHRML 444
R W + +I + + + EE++RM+
Sbjct: 207 ERKKWIHCFEGVTAIIFCVALSAYDLVLAEDEEMNRMM 244
>SB_19713| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 507
Score = 31.9 bits (69), Expect = 0.42
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 232 EAVHTRPTIGSNVE-EVVWKNLRFVMWDLGGQQSLRSAWNTYYTNSEFVIMVIDST 396
+ +H+R VE E + K++ F M D+GGQ+S R+ W + ++ ++ S+
Sbjct: 385 DMLHSRKATKGIVEHEFMIKSIPFKMVDVGGQRSQRAKWFQCFDEVTSILFLVSSS 440
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 31.5 bits (68), Expect = 0.56
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 6/84 (7%)
Frame = +1
Query: 166 KLVLVGLDNAGKTTILYQLLLGEAVHTR-PTIGSNVE---EVVWKNLRFVMWDLGGQQSL 333
KLV+VG GKT +L + PT+ N EV K + +WD GQ+
Sbjct: 5931 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 5990
Query: 334 RSAWNTYYTNSEFVIMV--IDSTD 399
Y +++ ++M IDS D
Sbjct: 5991 DRLRPLSYPDTDVILMCFSIDSPD 6014
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 31.5 bits (68), Expect = 0.56
Identities = 25/107 (23%), Positives = 50/107 (46%), Gaps = 9/107 (8%)
Frame = +1
Query: 247 RPTIGSN--VEEVVWKN---LRFVMWDLGGQQSLRSAWNTYYTNSEFVIMVIDSTDRQRL 411
+PTIG + ++ + W +R +W + GQ+ S YY ++ +++ D + L
Sbjct: 48 KPTIGVDFALKTIQWAQNTTIRLQIWLIAGQERFSSMTRVYYKGADACVVLFDLERQTTL 107
Query: 412 GIS---REEL-HRMLVHEELSKACLLVFANKQDVKGSMTAAEISEQL 540
+ +++L + +H C+LV NK D+ EI ++L
Sbjct: 108 DGAIKWKKDLDSKYKLHSRKPVPCILV-GNKSDLPDRPVDKEIIDKL 153
>SB_18911| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 146
Score = 31.5 bits (68), Expect = 0.56
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -3
Query: 373 RTHYLCSKYSMLISSFVVLLSPTSQTGDSSTQPLQHST 260
R HY C Y ++I VV+++ T T SS+ PL S+
Sbjct: 30 RRHYHCHHYIIIIIIIVVVITTTIITSSSSSSPLPLSS 67
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 31.5 bits (68), Expect = 0.56
Identities = 26/119 (21%), Positives = 53/119 (44%), Gaps = 4/119 (3%)
Frame = +1
Query: 157 EEHKLVLVGLDNAGKTTILYQLLLGEAVHT-RPTIGSNV-EEVVWKNLRFVM--WDLGGQ 324
+E+K+V++G GK+ + Q + G+ V PTI +E+ N ++ D G
Sbjct: 2 KEYKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIEDFYRKEIEVDNNPSILEILDTAGT 61
Query: 325 QSLRSAWNTYYTNSEFVIMVIDSTDRQRLGISREELHRMLVHEELSKACLLVFANKQDV 501
+ S + Y N + ++V +RQ + ++L + +++ NK D+
Sbjct: 62 EQFASMRDLYIKNGQGFLLVYSLINRQTFADLKPMRAQILRVKGSENVPIVLVGNKSDI 120
>SB_30236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 353
Score = 30.7 bits (66), Expect = 0.98
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 10/78 (12%)
Frame = +1
Query: 298 FVMWDLGGQQSLRSAWNTYYTN----------SEFVIMVIDSTDRQRLGISREELHRMLV 447
F M D+GGQ+S R W + N SE+ ++++S R+ S+ ++
Sbjct: 195 FRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDSENRMEESKALFRTIIT 254
Query: 448 HEELSKACLLVFANKQDV 501
+ + +++F NK+D+
Sbjct: 255 YPWFQNSSIILFLNKKDL 272
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/72 (23%), Positives = 33/72 (45%)
Frame = +1
Query: 286 KNLRFVMWDLGGQQSLRSAWNTYYTNSEFVIMVIDSTDRQRLGISREELHRMLVHEELSK 465
K ++ +WD GQ+ + YY + +++V D T+ + + L ++ H
Sbjct: 3 KKIKLQIWDTAGQERFHTITTAYYRGAMGIMLVYDVTNEKSFSNISKWLKKIDDHANEDV 62
Query: 466 ACLLVFANKQDV 501
+LV NK D+
Sbjct: 63 KRMLV-GNKCDM 73
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 30.3 bits (65), Expect = 1.3
Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 17/112 (15%)
Frame = +1
Query: 166 KLVLVGLDNAGKTTILYQLLLGEAVHTR--PTIGSNVEE--VVW-------------KNL 294
K + +G GKT++LYQ + R PTIG + E VV + +
Sbjct: 108 KFLALGDSGVGKTSLLYQYT-DSHFNPRFVPTIGIDFREKRVVHHPLNPDGERSTRGQRI 166
Query: 295 RFVMWDLGGQQSLRSAWNTYYTNSEFVIMVIDSTDRQRLGISREELHRMLVH 450
+WD GQ+ RS ++ ++ ++V D T Q R L ++ H
Sbjct: 167 HLQLWDTAGQERFRSLTTAFFRDAMGFLLVFDLTHEQSFVNIRNWLSQLQTH 218
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 286 KNLRFVMWDLGGQQSLRSAWNTYYTNSEFVIMVIDST 396
K +F +WD GQ+ +S YY ++ I+V D T
Sbjct: 7 KAYKFNIWDTAGQERFKSLAPLYYRDAAAAILVYDIT 43
>SB_27093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 683
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/38 (39%), Positives = 27/38 (71%)
Frame = +1
Query: 121 LLISKIWSLFGNEEHKLVLVGLDNAGKTTILYQLLLGE 234
++ SK+ + N E ++ +VG + +GKTT+L ++LLGE
Sbjct: 352 VIFSKV-DISANNESRIAVVGDNGSGKTTLL-KILLGE 387
>SB_7052| Best HMM Match : LRR_1 (HMM E-Value=2e-12)
Length = 1328
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +1
Query: 100 RSSYKXGLLISKIWSLFGNEEHKLVLVGLDNAGKTTILYQLLLGEA 237
+S L SK+ + KLV VG+ GKTT+L QLL +A
Sbjct: 1092 KSKELIAFLHSKLMNSVPYYRMKLVTVGMGGRGKTTLLNQLLKSKA 1137
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/82 (23%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Frame = +1
Query: 166 KLVLVGLDNAGKTTILYQLLLGEAVHT-RPTIGSNVE----EVVWKNLRFVMWDLGGQQS 330
K+V +G GK++ L++ + + TIG + + V + + +WD GQ+
Sbjct: 898 KVVFIGDSGVGKSSFLHRFCHDQWKPSFTATIGVDFQIKTMNVNGQCIAIQLWDTAGQER 957
Query: 331 LRSAWNTYYTNSEFVIMVIDST 396
RS Y+ ++ +++ D T
Sbjct: 958 FRSITKQYFRKADGILIFYDVT 979
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +1
Query: 286 KNLRFVMWDLGGQQSLRSAWNTYYTNSEFVIMVIDST 396
++++ +WD GQ+ R+ +YY + VI+ D T
Sbjct: 93 QDVKLQIWDTAGQERFRTITQSYYRSCNGVIIAYDIT 129
>SB_19075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6500
Score = 29.5 bits (63), Expect = 2.3
Identities = 27/113 (23%), Positives = 49/113 (43%), Gaps = 6/113 (5%)
Frame = +1
Query: 124 LISKIWSLFGNEEHKLVLVGLDNAGKTTILYQLLLGEA------VHTRPTIGSNVEEVVW 285
L+++ S G + K VL KT +L+ L G + TI S ++
Sbjct: 5382 LVTEKPSALGEKIMKKVLKDTAKVAKTDMLFALSAGSGDPVSNLARMKNTIKSIIDRYGS 5441
Query: 286 KNLRFVMWDLGGQQSLRSAWNTYYTNSEFVIMVIDSTDRQRLGISREELHRML 444
++R+ + GG ++ + Y + + +DS +R++ G S LHR L
Sbjct: 5442 TSIRYGVIVFGGVPVIKMGFEKEYRSDSDIKRYLDSINREKQGSS---LHRSL 5491
>SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/77 (22%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = +1
Query: 304 MWDLGGQQSLRSAWNTYYTNSEFVIMVI---DSTDRQRLGISREELHRMLVHEELSKACL 474
+WD GQ+ +S +Y S+ ++V D+ L + ++E +
Sbjct: 264 IWDTAGQERFKSLRTPFYRGSDLCLLVYAVDDAKSFTNLSMWKKEFLYYADVRDQDNFPF 323
Query: 475 LVFANKQDVKGSMTAAE 525
++ NK DV+G + E
Sbjct: 324 ILLGNKVDVEGRAVSQE 340
>SB_36818| Best HMM Match : RVT_1 (HMM E-Value=8e-35)
Length = 629
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 375 YNGDRLDRSTAFRHKPGRAASHACP 449
+ GDR R TA RH+ RAAS + P
Sbjct: 578 FEGDRRSRLTAARHRRHRAASASVP 602
>SB_31784| Best HMM Match : RVT_1 (HMM E-Value=2e-35)
Length = 963
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 375 YNGDRLDRSTAFRHKPGRAASHACP 449
+ GDR R TA RH+ RAAS + P
Sbjct: 912 FEGDRRSRLTAARHRRHRAASASVP 936
>SB_28319| Best HMM Match : zf-C2H2 (HMM E-Value=0.012)
Length = 179
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 375 YNGDRLDRSTAFRHKPGRAASHACP 449
+ GDR R TA RH+ RAAS + P
Sbjct: 128 FEGDRRSRLTAARHRRHRAASASVP 152
>SB_10620| Best HMM Match : zf-C2H2 (HMM E-Value=0.012)
Length = 159
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 375 YNGDRLDRSTAFRHKPGRAASHACP 449
+ GDR R TA RH+ RAAS + P
Sbjct: 108 FEGDRRSRLTAARHRRHRAASASVP 132
>SB_50300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3669
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 375 YNGDRLDRSTAFRHKPGRAASHACP 449
+ GDR R TA RH+ RAAS + P
Sbjct: 3348 FEGDRRSRLTAARHRRHRAASASVP 3372
>SB_33829| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 290
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/64 (23%), Positives = 31/64 (48%)
Frame = +1
Query: 385 IDSTDRQRLGISREELHRMLVHEELSKACLLVFANKQDVKGSMTAAEISEQLXLTSIKQH 564
+ + D L + E++ R +V K + +D+ M A++ ++ L SI++H
Sbjct: 184 VPTFDDTNLKVLLEQVSRDVVFSRRKK----ISDEVKDLVRRMLVADVKTRIDLASIRRH 239
Query: 565 PWHI 576
PW +
Sbjct: 240 PWFV 243
>SB_42285| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1153
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +1
Query: 283 WKNLRFVMWDLGGQQSLRSAWNTYYTNSEFVIMVID 390
W NL +WD GG+Q L + T+ +M +
Sbjct: 405 WDNLTVELWDSGGRQCLFGLQPLFLTDQTLYVMTFN 440
>SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30)
Length = 517
Score = 28.3 bits (60), Expect = 5.2
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +1
Query: 307 WDLGGQQSLRSAWNTYYTNSEFVIMVIDSTDRQRLGISREELHRMLVHEE 456
W+ GQ+ R+ ++YY + V++V D T R+ S LH+ L+ E
Sbjct: 374 WE-AGQERFRTITSSYYRGAHGVMIVYDITKRE----SYNNLHKWLMEVE 418
>SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1117
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +1
Query: 214 YQLLLGEAVHTRPTIGSNVE-EVVWKNLRFVMWDLGGQQSLRSAW 345
Y+ + + TR VE + +K L F ++D+GGQ+S R W
Sbjct: 216 YEATEQDLLRTRVKTTGIVEVQFDYKRLHFKLFDVGGQRSERKKW 260
>SB_8302| Best HMM Match : G-alpha (HMM E-Value=0)
Length = 315
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +1
Query: 214 YQLLLGEAVHTRPTIGSNVE-EVVWKNLRFVMWDLGGQQSLRSAW 345
Y+ + + TR VE + +K L F ++D+GGQ+S R W
Sbjct: 168 YEATEQDLLRTRVKTTGIVEVQFDYKRLHFKLFDVGGQRSERKKW 212
>SB_58217| Best HMM Match : Ras (HMM E-Value=0.00048)
Length = 472
Score = 27.9 bits (59), Expect = 6.9
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +1
Query: 304 MWDLGGQQSLRSAWNTYYTNSEFVIMVIDSTDRQRLGISREELHRMLVHEELSKACLLVF 483
+WD G + S +Y+NS+ V++V L +E V+ +K +++
Sbjct: 3 LWDTLGMEEYESLTRNHYSNSKVVLVVYSLDLPDSLAQVKECTQSAQVNAPAAK--IVLV 60
Query: 484 ANKQDV 501
ANK D+
Sbjct: 61 ANKMDL 66
>SB_50666| Best HMM Match : ig (HMM E-Value=2.8e-20)
Length = 293
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 245 VCTASPRSSWYKIVVLPALSRPT 177
+CTA PR +W + P ++RPT
Sbjct: 93 MCTAEPRGTWGERHAPPMITRPT 115
>SB_17366| Best HMM Match : Filament (HMM E-Value=0.14)
Length = 306
Score = 27.5 bits (58), Expect = 9.1
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 400 RQRLGISREELHRMLVH--EELSKACLLVFANKQDVKGSMTAAEISEQL 540
RQ I +EEL+R L+H EEL + F+ K V S T + + +QL
Sbjct: 64 RQHFEIEKEELNRKLIHEKEELRYSLEAEFSQK-FVNESATQSGVIQQL 111
>SB_41185| Best HMM Match : RVT_1 (HMM E-Value=1.7e-10)
Length = 1118
Score = 27.5 bits (58), Expect = 9.1
Identities = 27/115 (23%), Positives = 43/115 (37%)
Frame = +1
Query: 196 GKTTILYQLLLGEAVHTRPTIGSNVEEVVWKNLRFVMWDLGGQQSLRSAWNTYYTNSEFV 375
GK +LY L +H T ++ +EV + D RS NT T+ +
Sbjct: 752 GKQQVLYDCLSRAPIHIPETPSNDSDEVQVNLVEKFRLDKDALSKFRSCTNTDETSQVVM 811
Query: 376 IMVIDSTDRQRLGISREELHRMLVHEELSKACLLVFANKQDVKGSMTAAEISEQL 540
V+ R I EELS L+F + + V AE+ +++
Sbjct: 812 NYVLTGWPSDRGQIDELAREYFNYREELSVEDGLLFKSDRIVVPRGMRAEVLDEI 866
>SB_19819| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 320
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 310 PTSQTGDSSTQPLQHSTLWWA 248
PT T +S+ P QH+TLW A
Sbjct: 233 PTYYTMESTCSPYQHTTLWRA 253
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,058,515
Number of Sequences: 59808
Number of extensions: 405356
Number of successful extensions: 1003
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 981
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1512078125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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