Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_D10
         (746 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70750-10|CAA94746.1|  439|Caenorhabditis elegans Hypothetical p...    58   7e-09
U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical pr...    38   0.010
Z68120-4|CAA92202.1|  328|Caenorhabditis elegans Hypothetical pr...    29   4.6  

>Z70750-10|CAA94746.1|  439|Caenorhabditis elegans Hypothetical
           protein C50F4.12 protein.
          Length = 439

 Score = 58.0 bits (134), Expect = 7e-09
 Identities = 33/128 (25%), Positives = 68/128 (53%), Gaps = 2/128 (1%)
 Frame = +3

Query: 369 YLQVEPGESEICSISYEKPTNVLQRTYKDLSDVTPFLSNTFNLAAYVNHSKTLQNLIDLN 548
           Y ++E  E E+      +P +       D S++ P  S++  +  +VNHS  L+ L+D+ 
Sbjct: 107 YRKIEYTEGELDHTDLTEPASPSNPHPFDPSELPPVHSHS--IVPFVNHSPLLRFLVDIG 164

Query: 549 VNISKFEKKPYIIEKLLKLDFEKNMKSHIVFLSDYVNMEQ--MGEFFTKNPMIFCEHLED 722
           V++++ E    + + LL+L  E +++  I  + + +  E   +G + T+NP    + + D
Sbjct: 165 VDLAEIENTTTVGKHLLRLQIE-DVRQKIELMQNEIGFENEAIGPYLTRNPFFLIQDVND 223

Query: 723 LKTXVNYL 746
           ++T +NYL
Sbjct: 224 MQTRLNYL 231


>U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical
           protein K10D2.1a protein.
          Length = 1223

 Score = 37.5 bits (83), Expect = 0.010
 Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
 Frame = +3

Query: 477 LSNTFNLAAYVNHSKTLQNLIDLNVNISKFEKKPYI--IEKLLKLDFEKNMKSHIVFLSD 650
           LS  +NL   ++H + L +L  LN+N ++ EK   +  +  L+ LD   N  + I  LS+
Sbjct: 15  LSLRWNLLKKIDHFQCLTSLTRLNLNDNQIEKLENLETLVNLVFLDVSYNRITKIEGLSE 74

Query: 651 YVNMEQMGEFFTKNPMIFCEHLEDLKTXVNYL 746
            +N+E++      N +I  E LE   T + YL
Sbjct: 75  LINLEEL--HLVHNKIITIEGLE-TNTAMKYL 103


>Z68120-4|CAA92202.1|  328|Caenorhabditis elegans Hypothetical
           protein T24C2.4 protein.
          Length = 328

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 17/64 (26%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
 Frame = +3

Query: 420 KPTNVLQRTYKDLSDVTPFLSNTFNLAA-YVNHSKTLQNLIDLNVNISKFEKKPYIIEKL 596
           + T +LQ  Y++L  +  +  NTFNL+  + N++ T ++  +L+  I   +K   +  + 
Sbjct: 107 RDTTILQLVYRNLVTLLKYKINTFNLSYWFFNNNPTFRD-TELSKLIETLKKVEIVKARK 165

Query: 597 LKLD 608
           L+L+
Sbjct: 166 LRLN 169


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,913,738
Number of Sequences: 27780
Number of extensions: 290894
Number of successful extensions: 716
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 715
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)