Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_D10
         (746 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   3.0  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   3.0  
U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor...    22   5.3  
AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective...    22   5.3  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   7.0  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 8/31 (25%), Positives = 18/31 (58%)
 Frame = +3

Query: 546 NVNISKFEKKPYIIEKLLKLDFEKNMKSHIV 638
           +VN+  + +   ++ K+L   +E N+K  +V
Sbjct: 371 SVNVQLYGQLDLLVRKVLGFGYESNVKYQVV 401


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 8/31 (25%), Positives = 18/31 (58%)
 Frame = +3

Query: 546 NVNISKFEKKPYIIEKLLKLDFEKNMKSHIV 638
           +VN+  + +   ++ K+L   +E N+K  +V
Sbjct: 371 SVNVQLYGQLDLLVRKVLGFGYESNVKYQVV 401


>U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor
           protein.
          Length = 129

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 496 KLNVFDKNGVTSD 458
           K  V+DKNG+T D
Sbjct: 61  KQRVYDKNGMTGD 73


>AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective
           protein-1 protein.
          Length = 128

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +3

Query: 330 KIQNAIPARSMCGYLQVEPGESEIC 404
           K +  I   S CG +Q   G  E+C
Sbjct: 45  KCKYGIAMSSACGIVQCAKGPDELC 69


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 426 WVFHN*YCKFHFHQ 385
           W FH    +F+FHQ
Sbjct: 180 WTFHEGRKQFYFHQ 193


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,884
Number of Sequences: 438
Number of extensions: 3632
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23388480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)