Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_D09
(712 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 292 2e-79
SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.) 291 3e-79
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 114 8e-26
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 105 4e-23
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 105 4e-23
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 90 1e-18
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 1e-17
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 1e-15
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 1e-15
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 76 2e-14
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 2e-14
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 75 8e-14
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 1e-13
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 72 5e-13
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 70 2e-12
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 61 1e-09
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 7e-09
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 54 1e-07
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 46 2e-05
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 46 3e-05
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 40 0.003
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 39 0.003
SB_27891| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.043
SB_17696| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.075
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_48450| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_13635| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_17508| Best HMM Match : Herpes_gE (HMM E-Value=8.5) 28 8.6
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 292 bits (716), Expect = 2e-79
Identities = 135/176 (76%), Positives = 150/176 (85%)
Frame = +1
Query: 184 KKEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKS 363
KK+VKG+YVSIHSSGFRDFLLKPE+LRAIVDCGFEHPSEVQHECIPQA+LGMDI+CQAKS
Sbjct: 34 KKDVKGTYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDIICQAKS 93
Query: 364 GMGKTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGG 543
GMGKTAVFVLATLQQLEP + V VLVMCHTRELAFQI KEYERF KYMS ++++VFFGG
Sbjct: 94 GMGKTAVFVLATLQQLEPVDGQVSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGG 153
Query: 544 MPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLXM 711
+ I+KD++ LKT CPHIVVGTPGRILA FILDECDKMLE L +
Sbjct: 154 INIKKDQQTLKTNCPHIVVGTPGRILALTREKTLNLKHAKHFILDECDKMLEQLDL 209
>SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 291 bits (715), Expect = 3e-79
Identities = 135/174 (77%), Positives = 149/174 (85%)
Frame = +1
Query: 184 KKEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKS 363
KK+VKG+YVSIHSSGFRDFLLKPE+LRAIVDCGFEHPSEVQHECIPQA+LGMDI+CQAKS
Sbjct: 34 KKDVKGTYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDIICQAKS 93
Query: 364 GMGKTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGG 543
GMGKTAVFVLATLQQLEP + V VLVMCHTRELAFQI KEYERF KYMS ++++VFFGG
Sbjct: 94 GMGKTAVFVLATLQQLEPVDGQVSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGG 153
Query: 544 MPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESL 705
+ I+KD++ LKT CPHIVVGTPGRILA FILDECDKMLE L
Sbjct: 154 INIKKDQQTLKTNCPHIVVGTPGRILALTREKTLNLKHAKHFILDECDKMLEQL 207
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 114 bits (274), Expect = 8e-26
Identities = 56/157 (35%), Positives = 87/157 (55%)
Frame = +1
Query: 229 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 408
F LL P +LR + + GFE PS +Q + IP G+D++ QAKSG GKT VF + L+
Sbjct: 15 FHSLLLSPTLLRGLNEAGFEKPSPIQLKAIPLGRCGLDLIAQAKSGTGKTCVFSVIALEN 74
Query: 409 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 588
+ + + ++++ TRE+A Q+ + G+ VF GG+ +++D++ LK+
Sbjct: 75 VITESNCIQIIILTPTREIAVQVKDVICAIGCHYDGLACKVFIGGISLEEDKKALKSC-- 132
Query: 589 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLE 699
HI VGTPGR+ FILDE DK+L+
Sbjct: 133 HIAVGTPGRVKYLIEQKYLKTESVRMFILDEADKLLD 169
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 105 bits (252), Expect = 4e-23
Identities = 57/162 (35%), Positives = 90/162 (55%), Gaps = 6/162 (3%)
Frame = +1
Query: 229 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 408
F D+ LK E+L I + GF+ PS +Q E IP A+ G DIL +AK+G GKTA +++ L++
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLLER 108
Query: 409 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKD------EEV 570
+ +++ + LV+ TRELA Q S+ K+M G +V V GG ++ D +++
Sbjct: 109 TDTTKNCIQALVLVPTRELALQTSQICIELGKHM-GAQVMVTTGGTSLKDDILRLYNKDI 167
Query: 571 LKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKML 696
H++V TPGR+L ++DE DK+L
Sbjct: 168 FVHVVVHVIVATPGRVLDLMKKKLADMSKCQMLVMDEADKLL 209
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 105 bits (252), Expect = 4e-23
Identities = 57/162 (35%), Positives = 90/162 (55%), Gaps = 6/162 (3%)
Frame = +1
Query: 229 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 408
F D+ LK E+L I + GF+ PS +Q E IP A+ G DIL +AK+G GKTA +++ L++
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLLER 108
Query: 409 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKD------EEV 570
+ +++ + LV+ TRELA Q S+ K+M G +V V GG ++ D +++
Sbjct: 109 TDTTKNCIQALVLVPTRELALQTSQICIELGKHM-GAQVMVTTGGTSLKDDILRLYNKDI 167
Query: 571 LKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKML 696
H++V TPGR+L ++DE DK+L
Sbjct: 168 FVHVVVHVIVATPGRVLDLMKKKLADMSKCQMLVMDEADKLL 209
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 90.2 bits (214), Expect = 1e-18
Identities = 49/144 (34%), Positives = 79/144 (54%), Gaps = 1/144 (0%)
Frame = +1
Query: 271 VDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSESHVYVLVMC 450
V G + P+E+Q C+P + G D + AK+G GKTA F L LQ+L ++ +V+
Sbjct: 23 VAMGIKKPTEIQLNCVPPILQGRDCIGCAKTGSGKTAAFALPILQKLCDDPYGIFAVVLT 82
Query: 451 HTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILAXX 630
TRELAFQI+ +++ + + G++ +V GG+ + K L PH+V+ TPGR+
Sbjct: 83 PTRELAFQIADQFKVLGRPI-GLKEAVIVGGLDMMKQALSLANK-PHVVIATPGRLADHI 140
Query: 631 XXXXXXXXXXXXF-ILDECDKMLE 699
F +LDE D++L+
Sbjct: 141 KSTDTLNLKKIQFLVLDEADRLLD 164
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 87.4 bits (207), Expect = 1e-17
Identities = 53/139 (38%), Positives = 68/139 (48%)
Frame = +1
Query: 280 GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSESHVYVLVMCHTR 459
GFE PS +Q I + G D++ QA+SG GKTA F ++ LQ ++ LV+ TR
Sbjct: 16 GFEKPSAIQQRAIKPILKGRDVIAQAQSGTGKTATFSISVLQAIDTQLREPQALVLSPTR 75
Query: 460 ELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILAXXXXX 639
ELA QI K YMS V+ GG I +D L HIV GTPGR+
Sbjct: 76 ELANQIQKVVLALGDYMS-VQCHACIGGTNIGEDIRKLDYG-QHIVSGTPGRVFDMIRRR 133
Query: 640 XXXXXXXXXFILDECDKML 696
+LDE D+ML
Sbjct: 134 NLRTRSIKMLVLDEADEML 152
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 80.6 bits (190), Expect = 1e-15
Identities = 55/181 (30%), Positives = 84/181 (46%), Gaps = 5/181 (2%)
Frame = +1
Query: 172 EVAPKKEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILC 351
E P K V G + F + +++ I G+ P+ VQ +P + G D++
Sbjct: 463 ENIPSK-VSGENQPPKITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLMA 521
Query: 352 QAKSGMGKTAVFVLATL-----QQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSG 516
A++G GKTA ++L L Q L L + TRELA QI E +FS + +
Sbjct: 522 CAQTGSGKTAAYMLPVLTSLIKQGLNAPPRSPLALCVAPTRELAKQIYIEARKFSDH-TP 580
Query: 517 VRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKML 696
++V V +GG+ + L+ C H +VGTPGR+ ILDE D+ML
Sbjct: 581 IKVCVCYGGVSVPYQASQLERGC-HFLVGTPGRLQDFVSREKIYLGSIQHLILDEADRML 639
Query: 697 E 699
+
Sbjct: 640 D 640
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 80.6 bits (190), Expect = 1e-15
Identities = 67/204 (32%), Positives = 95/204 (46%), Gaps = 20/204 (9%)
Frame = +1
Query: 67 VNKLIKLKXIMXXXXXXXXXXXXXXXXQQTADGSTEVAPKKEVKGSYVSIHSSGFRDFLL 246
VNK K K ++ G E ++VKGS + + + +
Sbjct: 80 VNKKKKKKKKKVAKKKDNDTVTQQETQEKEKGGDAEGLSNQKVKGSLIDMPE--WEGLGV 137
Query: 247 KPEILRAIVDCGFEHPSEVQHECIPQAVL-GMDILCQAKSGMGKTAVFVLATLQQLE--- 414
P+ILRA+ D GF P+ +Q IP A+L DI+ A++G GKT F + +Q +E
Sbjct: 138 APDILRALGDQGFSKPTPIQSLSIPPALLYHRDIIGAAETGSGKTLAFGIPIIQHIEAYK 197
Query: 415 -------PS------ESHVY---VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGM 546
PS ES Y L+M TRELA Q+ + +KY S V+V+ GGM
Sbjct: 198 KRKAEQSPSDKESDLESQGYPLLALIMAPTRELALQVKDHLVKAAKYTS-VKVAAIVGGM 256
Query: 547 PIQKDEEVLKTACPHIVVGTPGRI 618
K + +LK P IVV TPGR+
Sbjct: 257 AAPKQQRLLKQR-PEIVVATPGRL 279
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 76.2 bits (179), Expect = 2e-14
Identities = 44/162 (27%), Positives = 79/162 (48%), Gaps = 3/162 (1%)
Frame = +1
Query: 220 SSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLG--MDILCQAKSGMGKTAVFVL 393
+ F + L + R + D GF PS++Q +P + ++++ Q++SG GKTA FVL
Sbjct: 102 AKSFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLADPPVNMIAQSQSGTGKTAAFVL 161
Query: 394 ATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVL 573
L +++ ++ + V+ + T ELA Q K E K+ ++++ G + ++
Sbjct: 162 TMLSRVDATKPYPQVICLSPTYELARQTGKVAEAMGKHCPHIKINYAVRGNQFPRGQK-- 219
Query: 574 KTACPHIVVGTPGRILA-XXXXXXXXXXXXXXFILDECDKML 696
HI++GTPG +L F+LDE D M+
Sbjct: 220 --CTDHIIIGTPGTLLDWIRKSKCFEPRKVSVFVLDEADIMI 259
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 76.2 bits (179), Expect = 2e-14
Identities = 61/184 (33%), Positives = 82/184 (44%), Gaps = 28/184 (15%)
Frame = +1
Query: 229 FRDFLLKPEILRAIVDCGFEHPSEVQ--------------HECIPQAVL--------GMD 342
F D LK +LR I GFE PS +Q H C Q L D
Sbjct: 65 FDDMNLKEALLRGIYAYGFEKPSAIQQRAIRPCCQEFSPSHVCYNQLNLTKNHYVLSARD 124
Query: 343 ILCQAKSGMGKTAVFVLATLQQLEPSESH------VYVLVMCHTRELAFQISKEYERFSK 504
++ QA+SG GKTA F ++ LQ+++ + LV+ TRELA QI K
Sbjct: 125 VIAQAQSGTGKTATFAISILQEIDTNYKDKNGCDCCQALVLAPTRELAQQIQKVVLALGD 184
Query: 505 YMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDEC 684
YM V+ GG +++D L+ H+VVGTPGR+ F+LDE
Sbjct: 185 YMH-VKCHACIGGTNVREDRMKLEEGV-HVVVGTPGRVFDMINRGVLNTRDIKLFVLDEA 242
Query: 685 DKML 696
D+ML
Sbjct: 243 DEML 246
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 74.5 bits (175), Expect = 8e-14
Identities = 50/170 (29%), Positives = 78/170 (45%), Gaps = 6/170 (3%)
Frame = +1
Query: 208 VSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVF 387
V+ F F + + + + D G + +Q G D++ QA++G GKT F
Sbjct: 68 VAQREGDFSKFRISQKTIDNLEDRGITYLFPIQASTFNYIYDGEDVIGQARTGTGKTLSF 127
Query: 388 VLATLQQLEPSESHVY------VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMP 549
L +++L+ + VLVM TRELA Q+ E+E S + V +GGMP
Sbjct: 128 ALPLVEKLQDGKLSQKRGRAPKVLVMAPTRELAKQVGNEFENLK---SNLEVYCIYGGMP 184
Query: 550 IQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLE 699
+ E + + ++VGTPGRIL +LDE D+ML+
Sbjct: 185 YEPQENAINSGLD-VLVGTPGRILDFMRQGTLDLSKLKHVVLDEVDRMLD 233
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 73.7 bits (173), Expect = 1e-13
Identities = 52/175 (29%), Positives = 85/175 (48%), Gaps = 5/175 (2%)
Frame = +1
Query: 190 EVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGM 369
+V G+ + F F +++ +I + P+++Q + +P A+ G DI+ AK+G
Sbjct: 506 KVSGAMPARPCISFAHFGFDEQMMASIRKLEYTQPTQIQCQALPIALSGRDIIGIAKTGS 565
Query: 370 GKTAVFVL-ATLQQLEPSESHV----YVLVMCHTRELAFQISKEYERFSKYMSGVRVSVF 534
GKTA F+ A + ++ E V VL+ TREL QI E RF K + V+VF
Sbjct: 566 GKTAAFLWPALVHIMDQPELQVGDGPIVLICAPTRELCQQIYTEARRFGKAYNIHVVAVF 625
Query: 535 FGGMPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLE 699
GG ++ + + + A IVV TPGR++ + DE D+M +
Sbjct: 626 GGGNKYEQSKALQEGA--EIVVATPGRLIDHVKAKATNLHRVTYLVFDEADRMFD 678
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 71.7 bits (168), Expect = 5e-13
Identities = 38/120 (31%), Positives = 66/120 (55%), Gaps = 1/120 (0%)
Frame = +1
Query: 340 DILCQAKSGMGKTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGV 519
D++ A++G GKT F L LQ L + ++ L++ TRELAFQIS++ E + GV
Sbjct: 3 DVIGLAETGSGKTGAFALPILQALLDNPQRLFALILTPTRELAFQISEQCEALGSGI-GV 61
Query: 520 RVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXF-ILDECDKML 696
+ +V GG+ + + ++ PHI++ TPGR++ + ++DE D++L
Sbjct: 62 KCAVIVGGIDMM-SQALMLAKKPHIIIATPGRLIDHLENTKGFSLRTLKYLVMDEADRIL 120
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 69.7 bits (163), Expect = 2e-12
Identities = 50/163 (30%), Positives = 83/163 (50%), Gaps = 6/163 (3%)
Frame = +1
Query: 229 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVF---VLAT 399
F DF + L ++ GF P+++Q + IP A+ G D+L AK+G GKT F ++ T
Sbjct: 52 FSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAKTGSGKTLAFLIPIIET 111
Query: 400 L-QQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEE-VL 573
L +Q S + LV+ TRELA+Q + + + + GG ++ +++ ++
Sbjct: 112 LWRQKWTSMDGLGALVISPTRELAYQTFEVLVKIGN-KHDLSAGLIIGGKDLKNEQKRIM 170
Query: 574 KTACPHIVVGTPGRILAXXXXX-XXXXXXXXXFILDECDKMLE 699
KT +IVV TPGR+L +LDE D++L+
Sbjct: 171 KT---NIVVCTPGRLLQHMDETPNFDCTSLQILVLDEADRILD 210
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 60.9 bits (141), Expect = 1e-09
Identities = 33/74 (44%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Frame = +1
Query: 262 RAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQL--EPSES-HV 432
RA+ + GF HP+ +Q IP A++G D+ A +G GKTA F+L L++L P++S +
Sbjct: 23 RAVNELGFLHPTPIQASTIPVALMGKDVCACAATGTGKTAAFMLPILERLLYRPTQSPAI 82
Query: 433 YVLVMCHTRELAFQ 474
VLV+ TRELA Q
Sbjct: 83 RVLVITPTRELAIQ 96
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 58.0 bits (134), Expect = 7e-09
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 5/152 (3%)
Frame = +1
Query: 259 LRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLE----PSES 426
L+ I D GF +E+QH+ I + G D+L AK+G GKT F++ ++ L + +
Sbjct: 584 LQGIKDMGFTTMTEIQHKSIAPLLKGRDLLGAAKTGSGKTLAFLVPVVELLYKLQFKTRN 643
Query: 427 HVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGT 606
V+++ TREL+ Q K+ + GG+ + + E L+ ++++ T
Sbjct: 644 GTGVIIISPTRELSLQTYGVARDLLKH-HNFTYGIIMGGVNRKAEAERLQKGV-NLLIAT 701
Query: 607 PGRILAXXXXXXXXXXXXXX-FILDECDKMLE 699
PGR+L ++DE D++LE
Sbjct: 702 PGRLLDHLQNTQGFLYKNLQCLVIDEADRILE 733
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 54.0 bits (124), Expect = 1e-07
Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 9/125 (7%)
Frame = +1
Query: 196 KGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGK 375
KG + +++ + IL + G++ P+ +Q + IP + DI+ A++G GK
Sbjct: 92 KGGRIPFPIRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNRDIIGVAETGSGK 151
Query: 376 TAVFV---------LATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVS 528
TA F L +++ ++ Y L++ TRELA QI +E +F + + G+R
Sbjct: 152 TAAFAIPLLVWIMGLPKIERDNDADQGPYALILAPTRELAQQIEEEILKFGRPL-GIRTV 210
Query: 529 VFFGG 543
GG
Sbjct: 211 SVIGG 215
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 46.4 bits (105), Expect = 2e-05
Identities = 36/162 (22%), Positives = 70/162 (43%), Gaps = 9/162 (5%)
Frame = +1
Query: 244 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSE 423
L+ ++L+A+ P+ +Q IP+ + ++C A++G GKT ++ + +L E
Sbjct: 385 LRDDVLKALDALNIHQPTVIQMVTIPKIIHRHHVICAAQTGSGKTLAYLAPLVHRLREDE 444
Query: 424 SHVYVL---------VMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLK 576
+L ++ RELA QI K + + + R GG + + L+
Sbjct: 445 ERHGILARLKRPRACIVVPARELATQILKTAKSLCHH-ARFRSVGLIGGRKQKWMRDDLE 503
Query: 577 TACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLES 702
+ ++V TPG +L ++DE D M ++
Sbjct: 504 SPV-DLLVATPGTLLKYRQKDRLFFSDLTHLVIDEADTMFDA 544
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 46.4 bits (105), Expect = 2e-05
Identities = 44/157 (28%), Positives = 66/157 (42%)
Frame = +1
Query: 229 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 408
F D L +L + G++ P+ VQ IP D++ A++G GKTA F++ L
Sbjct: 877 FEDVDLGEILLHNVGLAGYKKPTPVQKYAIPIVKGKRDLMACAQTGSGKTAAFLIPIL-- 934
Query: 409 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 588
S +Y+ + FS Y S R V +GG I L C
Sbjct: 935 -----SRIYM-----------EGPPAPPDFS-YRSLCRPCVVYGGADIGSQLRELDRNC- 976
Query: 589 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLE 699
H++V TPGR++ +LDE D+ML+
Sbjct: 977 HLLVATPGRLVDMMDRGRVGLDSIRFLVLDEADRMLD 1013
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 46.0 bits (104), Expect = 3e-05
Identities = 29/97 (29%), Positives = 46/97 (47%)
Frame = +1
Query: 409 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 588
L+P + + VLV+C TRELA Q+ + K+ +R + +GG P L+
Sbjct: 127 LQPGDGPI-VLVLCPTRELAQQVQEVAYSVGKHCK-LRSTCIYGGAPKGPQIRELERGV- 183
Query: 589 HIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLE 699
I + TPGR++ +LDE D+ML+
Sbjct: 184 EICIATPGRLIDMLESRKTNLRRCTYLVLDEADRMLD 220
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 39.5 bits (88), Expect = 0.003
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Frame = +1
Query: 229 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVF------V 390
F D L PE+ + F+ P+ +Q + + + G DI+ A++G GKT + +
Sbjct: 74 FHDLNLPPELSTYLAKKNFQVPTPIQMQSLSCVMSGRDIIGLAETGSGKTLAYSLPLCML 133
Query: 391 LATLQQLEPSESHVYVLVMCHTRELAFQI 477
L T P ++ V L++ TREL Q+
Sbjct: 134 LRTKAPSNPGDTPV-ALILTPTRELMQQV 161
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 39.1 bits (87), Expect = 0.003
Identities = 27/60 (45%), Positives = 31/60 (51%)
Frame = +1
Query: 439 LVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRI 618
LV+ TRELA QI K YMS V+ GG I +D L HIV GTPGR+
Sbjct: 7 LVLSPTRELANQIQKVVLALGDYMS-VQCHACIGGTNIGEDIRKLDYG-QHIVSGTPGRV 64
>SB_27891| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 609
Score = 35.5 bits (78), Expect = 0.043
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = +1
Query: 154 TADGSTEVAPKKEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHEC--IPQA 327
+A+ ST+ A S S+ + F L E+L + G H S VQ + A
Sbjct: 372 SAENSTQPARLASTPASIASLFNGYFSSLCLGSELLELV---GIPHLSSVQLRTQEVQNA 428
Query: 328 VLGMDILCQAKSGMGKTAVFVLATLQQLEPSESHVYVL 441
+L +D+ +A G + T QQ+ PS +H+Y L
Sbjct: 429 LLALDVN-EASGSDGIPCRLLKETAQQIAPSLTHLYNL 465
>SB_17696| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 119
Score = 34.7 bits (76), Expect = 0.075
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +1
Query: 148 QQTADGS-TEVAPKKEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQ 324
Q+ GS E ++V+GS + + S + + P+ILRA+ D GF P+ +Q IP
Sbjct: 48 QEKEKGSDAEGLSNQKVQGSLIDM--SEWEGLGVAPDILRALGDQGFSKPTPIQSLSIPP 105
Query: 325 AVL 333
A+L
Sbjct: 106 ALL 108
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = -3
Query: 389 TNTAVLPIPDLAWQSMSIPRTACGMHSC*TSEGCSKPQSTIARSISGLSKKSLKPELWM 213
T T + P LA ++ + P T + SE P+ST+A + + +L+PE M
Sbjct: 2435 TGTTIAPETTLALETTTAPETTLPPETTMASESTLAPESTLAPETTMVPGTTLEPETTM 2493
Score = 28.7 bits (61), Expect = 4.9
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Frame = -3
Query: 383 TAVLPIPDLAWQSMSIPRTACGMHSC*TSEGCSKPQSTIARSISGLSKKSLKPELWM--- 213
T P LA ++ + P T + E P+ST+A S+ +L+PE M
Sbjct: 1755 TTKAPETTLALETTTAPETTLPPEATMAPESTLAPESTLAPETIIASETTLEPETTMAPE 1814
Query: 212 DT*DPLTSFFGATSVDP 162
T P T+ T+++P
Sbjct: 1815 STVTPETTMVPVTTLEP 1831
>SB_48450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 457
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = -3
Query: 548 GIPP-KNTDTLTPDIYFEKRS--YSLLIWKANSLVWH-ITST*TWLSEGSSCC 402
GIP N TP I+ + +S Y +LIW A L+W I + L G CC
Sbjct: 109 GIPSLSNPKCYTPQIFEDVKSVWYWILIWIAGPLIWFTIIAVFALLVFGMYCC 161
>SB_13635| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 124
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Frame = +2
Query: 308 TNAFRKPSSVW--TYFAKPSPVWVRQPCL 388
T KPSS+W T +KPS +WV P L
Sbjct: 26 TTLTSKPSSLWVTTLTSKPSSLWVTSPDL 54
>SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 45
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 517 VRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRI 618
V+ GG +++D L+ H+VVGTPGR+
Sbjct: 3 VKCHACIGGTNVREDRMKLEEGV-HVVVGTPGRV 35
>SB_17508| Best HMM Match : Herpes_gE (HMM E-Value=8.5)
Length = 394
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Frame = +1
Query: 148 QQTADGST---EVAPKKEVKGSYVSIHSSGFRDFLLK 249
Q T DG T E+ K+E +G Y SSG FLL+
Sbjct: 67 QATIDGRTIVAEIKEKEEARGDYDDAISSGHSAFLLE 103
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,632,458
Number of Sequences: 59808
Number of extensions: 445537
Number of successful extensions: 1140
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1119
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1877743452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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