Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_D07
         (669 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    24   0.98 
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    24   0.98 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   1.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   1.3  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   5.2  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = +2

Query: 38  LWFKLLSTLHHVQN 79
           LWFKLL  L  VQN
Sbjct: 92  LWFKLLKNLKMVQN 105


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = +2

Query: 38  LWFKLLSTLHHVQN 79
           LWFKLL  L  VQN
Sbjct: 92  LWFKLLKNLKMVQN 105


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +3

Query: 594  IIFGFLMLNVLYMYAMF 644
            ++F FLMLN LY+  +F
Sbjct: 1225 MVFTFLMLNSLYVIVIF 1241



 Score = 21.8 bits (44), Expect = 5.2
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +2

Query: 308 NFKCAYASYCFGKFWSNIVWES 373
           N    Y  Y FGKF   ++ +S
Sbjct: 371 NISATYICYAFGKFSCKVMIQS 392


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +3

Query: 594  IIFGFLMLNVLYMYAMF 644
            ++F FLMLN LY+  +F
Sbjct: 1225 MVFTFLMLNSLYVIVIF 1241



 Score = 21.8 bits (44), Expect = 5.2
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +2

Query: 308 NFKCAYASYCFGKFWSNIVWES 373
           N    Y  Y FGKF   ++ +S
Sbjct: 371 NISATYICYAFGKFSCKVMIQS 392


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +2

Query: 308 NFKCAYASYCFGKFWSNIVWES 373
           N    Y  Y FGKF   ++ +S
Sbjct: 138 NISATYICYAFGKFSCKVMIQS 159


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,249
Number of Sequences: 336
Number of extensions: 2132
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)