Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_D07
(669 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC038997-1|AAH38997.1| 210|Homo sapiens C6orf189 protein protein. 77 8e-14
AL354716-1|CAI16921.1| 162|Homo sapiens protein ( Human DNA seq... 77 8e-14
BC015060-1|AAH15060.1| 154|Homo sapiens chromosome 3 open readi... 75 3e-13
BC010896-1|AAH10896.1| 154|Homo sapiens chromosome 3 open readi... 75 3e-13
AF201944-1|AAF86880.1| 154|Homo sapiens HGTD-P protein. 75 3e-13
AF107495-1|AAG39275.1| 154|Homo sapiens FWP001 protein. 75 3e-13
AF191020-1|AAF09484.1| 148|Homo sapiens E2IG5 protein. 74 5e-13
AF250321-1|AAG44569.1| 190|Homo sapiens DC16 protein. 32 1.6
>BC038997-1|AAH38997.1| 210|Homo sapiens C6orf189 protein protein.
Length = 210
Score = 76.6 bits (180), Expect = 8e-14
Identities = 35/93 (37%), Positives = 60/93 (64%)
Frame = +3
Query: 186 RPTEFQKTILVWTKKYKNKSEVPPFVSAEIIERSKSEARIKISNVLMLLTALASFGAILS 365
RP++F K IL+WT ++K+ E+PP + E+I+ ++++AR+K +++ LT +A F I+S
Sbjct: 116 RPSQFDKKILLWTGRFKSMEEIPPRIPPEMIDTARNKARVKACYIMIGLTIIACFAVIVS 175
Query: 366 GKAAAKRGESVHQMNLDWHKKYQEEHKEKSSAK 464
K A +R ES+ NL K++EE + AK
Sbjct: 176 AKRAVERHESLTSWNLAKKAKWREEAALAAQAK 208
>AL354716-1|CAI16921.1| 162|Homo sapiens protein ( Human DNA
sequence from clone RP11-86F4 on chromosome 6 Contains
the3' end of the KPNA5 gene for karyopherin alpha 5
(importin alpha 6),).
Length = 162
Score = 76.6 bits (180), Expect = 8e-14
Identities = 35/93 (37%), Positives = 60/93 (64%)
Frame = +3
Query: 186 RPTEFQKTILVWTKKYKNKSEVPPFVSAEIIERSKSEARIKISNVLMLLTALASFGAILS 365
RP++F K IL+WT ++K+ E+PP + E+I+ ++++AR+K +++ LT +A F I+S
Sbjct: 68 RPSQFDKKILLWTGRFKSMEEIPPRIPPEMIDTARNKARVKACYIMIGLTIIACFAVIVS 127
Query: 366 GKAAAKRGESVHQMNLDWHKKYQEEHKEKSSAK 464
K A +R ES+ NL K++EE + AK
Sbjct: 128 AKRAVERHESLTSWNLAKKAKWREEAALAAQAK 160
>BC015060-1|AAH15060.1| 154|Homo sapiens chromosome 3 open reading
frame 28 protein.
Length = 154
Score = 74.5 bits (175), Expect = 3e-13
Identities = 31/93 (33%), Positives = 62/93 (66%)
Frame = +3
Query: 186 RPTEFQKTILVWTKKYKNKSEVPPFVSAEIIERSKSEARIKISNVLMLLTALASFGAILS 365
+PT++QK IL+W+ ++K + E+P VS E+++ +K++ R+KIS +++ LT + ++
Sbjct: 62 KPTDWQKKILIWSGRFKKEDEIPETVSLEMLDAAKNKMRVKISYLMIALTVVGCIFMVIE 121
Query: 366 GKAAAKRGESVHQMNLDWHKKYQEEHKEKSSAK 464
GK AA+R E++ +NL+ + +EE K+ +
Sbjct: 122 GKKAAQRHETLTSLNLEKKARLKEEAAMKAKTE 154
>BC010896-1|AAH10896.1| 154|Homo sapiens chromosome 3 open reading
frame 28 protein.
Length = 154
Score = 74.5 bits (175), Expect = 3e-13
Identities = 31/93 (33%), Positives = 62/93 (66%)
Frame = +3
Query: 186 RPTEFQKTILVWTKKYKNKSEVPPFVSAEIIERSKSEARIKISNVLMLLTALASFGAILS 365
+PT++QK IL+W+ ++K + E+P VS E+++ +K++ R+KIS +++ LT + ++
Sbjct: 62 KPTDWQKKILIWSGRFKKEDEIPETVSLEMLDAAKNKMRVKISYLMIALTVVGCIFMVIE 121
Query: 366 GKAAAKRGESVHQMNLDWHKKYQEEHKEKSSAK 464
GK AA+R E++ +NL+ + +EE K+ +
Sbjct: 122 GKKAAQRHETLTSLNLEKKARLKEEAAMKAKTE 154
>AF201944-1|AAF86880.1| 154|Homo sapiens HGTD-P protein.
Length = 154
Score = 74.5 bits (175), Expect = 3e-13
Identities = 31/93 (33%), Positives = 62/93 (66%)
Frame = +3
Query: 186 RPTEFQKTILVWTKKYKNKSEVPPFVSAEIIERSKSEARIKISNVLMLLTALASFGAILS 365
+PT++QK IL+W+ ++K + E+P VS E+++ +K++ R+KIS +++ LT + ++
Sbjct: 62 KPTDWQKKILIWSGRFKKEDEIPETVSLEMLDAAKNKMRVKISYLMIALTVVGCIFMVIE 121
Query: 366 GKAAAKRGESVHQMNLDWHKKYQEEHKEKSSAK 464
GK AA+R E++ +NL+ + +EE K+ +
Sbjct: 122 GKKAAQRHETLTSLNLEKKARLKEEAAMKAKTE 154
>AF107495-1|AAG39275.1| 154|Homo sapiens FWP001 protein.
Length = 154
Score = 74.5 bits (175), Expect = 3e-13
Identities = 31/93 (33%), Positives = 62/93 (66%)
Frame = +3
Query: 186 RPTEFQKTILVWTKKYKNKSEVPPFVSAEIIERSKSEARIKISNVLMLLTALASFGAILS 365
+PT++QK IL+W+ ++K + E+P VS E+++ +K++ R+KIS +++ LT + ++
Sbjct: 62 KPTDWQKKILIWSGRFKKEDEIPETVSLEMLDAAKNKMRVKISYLMIALTVVGCIFMVIE 121
Query: 366 GKAAAKRGESVHQMNLDWHKKYQEEHKEKSSAK 464
GK AA+R E++ +NL+ + +EE K+ +
Sbjct: 122 GKKAAQRHETLTSLNLEKKARLKEEAAMKAKTE 154
>AF191020-1|AAF09484.1| 148|Homo sapiens E2IG5 protein.
Length = 148
Score = 73.7 bits (173), Expect = 5e-13
Identities = 30/85 (35%), Positives = 59/85 (69%)
Frame = +3
Query: 186 RPTEFQKTILVWTKKYKNKSEVPPFVSAEIIERSKSEARIKISNVLMLLTALASFGAILS 365
+PT++QK IL+W+ ++K + E+P VS E+++ +K++ R+KIS +++ LT + ++
Sbjct: 62 KPTDWQKKILIWSGRFKKEDEIPETVSLEMLDAAKNKMRVKISYLMIALTVVGCIFMVIE 121
Query: 366 GKAAAKRGESVHQMNLDWHKKYQEE 440
GK AA+R E++ +NL+ + +EE
Sbjct: 122 GKKAAQRHETLTSLNLEKKARLKEE 146
>AF250321-1|AAG44569.1| 190|Homo sapiens DC16 protein.
Length = 190
Score = 32.3 bits (70), Expect = 1.6
Identities = 12/39 (30%), Positives = 27/39 (69%)
Frame = +3
Query: 225 KKYKNKSEVPPFVSAEIIERSKSEARIKISNVLMLLTAL 341
+ + + E+P VS E+++ +K++ R+KIS +++ LT +
Sbjct: 75 RSLQKEDEIPETVSLEMLDAAKNKMRVKISYLMIALTVV 113
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,112,779
Number of Sequences: 237096
Number of extensions: 1057162
Number of successful extensions: 2008
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2005
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7591280850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -