Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_D05
(659 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A5A7A5 Cluster: Farnesyl diphosphate synthase 2; n=1; B... 203 3e-51
UniRef50_Q1XAB1 Cluster: Farnesyl diphosphate synthase-like prot... 128 2e-28
UniRef50_A5A7A6 Cluster: Farnesyl diphosphate synthase 3; n=1; B... 122 1e-26
UniRef50_Q09152 Cluster: Farnesyl pyrophosphate synthetase 1, mi... 91 2e-17
UniRef50_P0C565 Cluster: Chrysanthemyl diphosphate synthase, chl... 91 3e-17
UniRef50_Q7KN61 Cluster: GM06581p; n=6; Endopterygota|Rep: GM065... 87 3e-16
UniRef50_P14324 Cluster: Farnesyl pyrophosphate synthetase (FPP ... 86 8e-16
UniRef50_Q01KM5 Cluster: OSIGBa0158D24.4 protein; n=4; Oryza sat... 84 3e-15
UniRef50_Q56CY8 Cluster: Farnesyl diphosphate synthase; n=16; Ne... 82 1e-14
UniRef50_P08836 Cluster: Farnesyl pyrophosphate synthetase (FPP ... 81 2e-14
UniRef50_A4RUB9 Cluster: Predicted protein; n=2; Ostreococcus|Re... 79 9e-14
UniRef50_Q54XP0 Cluster: Farnesyl diphosphate synthase; n=3; Dic... 78 2e-13
UniRef50_Q7FAL6 Cluster: OSJNBa0071I13.18 protein; n=6; Magnolio... 76 9e-13
UniRef50_Q4RID2 Cluster: Chromosome 8 SCAF15044, whole genome sh... 75 2e-12
UniRef50_P08524 Cluster: Farnesyl pyrophosphate synthetase (FPP ... 71 2e-11
UniRef50_A5DDW6 Cluster: Putative uncharacterized protein; n=1; ... 71 2e-11
UniRef50_Q58GE8 Cluster: Geranyl diphosphate synthase; n=1; Ips ... 69 1e-10
UniRef50_Q5DC19 Cluster: SJCHGC02430 protein; n=1; Schistosoma j... 69 1e-10
UniRef50_Q75ND9 Cluster: Farnesyl diphosphate synthase; n=5; Dik... 67 4e-10
UniRef50_UPI0000DB7C0D Cluster: PREDICTED: similar to Farnesyl p... 64 3e-09
UniRef50_Q4QBL1 Cluster: Farnesyl pyrophosphate synthase, putati... 63 7e-09
UniRef50_A5K4U6 Cluster: Farnesyl pyrophosphate synthase, putati... 62 9e-09
UniRef50_A2R6Y8 Cluster: Contig An16c0060, complete genome; n=1;... 61 2e-08
UniRef50_A7AX33 Cluster: Farnesyl pyrophosphate synthetase , put... 55 2e-06
UniRef50_A2E130 Cluster: Polyprenyl synthetase family protein; n... 53 5e-06
UniRef50_Q0CIT1 Cluster: Putative uncharacterized protein; n=1; ... 52 9e-06
UniRef50_Q5CLA5 Cluster: Farnesyl pyrophosphate synthase; n=3; C... 51 2e-05
UniRef50_O59703 Cluster: Farnesyl pyrophosphate synthetase; n=1;... 50 4e-05
UniRef50_O62336 Cluster: Putative uncharacterized protein; n=2; ... 49 9e-05
UniRef50_A2EN50 Cluster: Polyprenyl synthetase family protein; n... 48 2e-04
UniRef50_Q8SQS0 Cluster: FARNESYL PYROPHOSPHATE SYNTHETASE; n=1;... 48 2e-04
UniRef50_UPI00005A15CB Cluster: PREDICTED: similar to Farnesyl p... 44 0.002
UniRef50_Q197X6 Cluster: Farnesyl diphosphate synthase; n=2; Tox... 44 0.002
UniRef50_UPI00005A125B Cluster: PREDICTED: similar to Farnesyl p... 43 0.006
UniRef50_Q7R2I4 Cluster: GLP_623_14387_13164; n=1; Giardia lambl... 43 0.006
UniRef50_Q79ZL1 Cluster: Polyprenyl diphosphate synthase; n=4; S... 42 0.010
UniRef50_Q0JWJ4 Cluster: Putative geranylgeranyl diphosphate syn... 42 0.010
UniRef50_Q4UAU6 Cluster: Farnesyl pyrophosphate synthetase, puta... 42 0.010
UniRef50_A1R1M5 Cluster: Putative geranylgeranyl pyrophosphate s... 42 0.013
UniRef50_A2ZWU6 Cluster: Putative uncharacterized protein; n=2; ... 41 0.023
UniRef50_UPI000038E5D8 Cluster: hypothetical protein Faci_030012... 41 0.030
UniRef50_Q3SAB7 Cluster: Geranylgeranyl pyrophosphate synthase; ... 40 0.070
UniRef50_A2SRA1 Cluster: Polyprenyl synthetase; n=3; Methanomicr... 40 0.070
UniRef50_Q55EU7 Cluster: Putative uncharacterized protein; n=1; ... 39 0.12
UniRef50_P74906 Cluster: Geranylgeranyl diphosphate synthetase; ... 38 0.21
UniRef50_Q97C41 Cluster: Farnesyl pyrophosphate synthase; n=3; T... 38 0.21
UniRef50_A3CXK9 Cluster: Polyprenyl synthetase; n=1; Methanocull... 38 0.28
UniRef50_P54383 Cluster: Geranyltranstransferase; n=27; Bacteria... 38 0.28
UniRef50_A3TKC8 Cluster: Putative polyprenyl synthase / dimethyl... 37 0.37
UniRef50_Q58270 Cluster: Bifunctional short chain isoprenyl diph... 37 0.37
UniRef50_Q9RVU0 Cluster: Polyprenyl synthase; n=4; Deinococci|Re... 37 0.49
UniRef50_Q8NT37 Cluster: Geranylgeranyl pyrophosphate synthase; ... 37 0.49
UniRef50_A7BDF8 Cluster: Putative uncharacterized protein; n=1; ... 36 0.86
UniRef50_A2RHR5 Cluster: Prenyl transferase; n=3; Lactococcus la... 36 1.1
UniRef50_A7DRA7 Cluster: Polyprenyl synthetase; n=1; Candidatus ... 36 1.1
UniRef50_Q8G4G0 Cluster: Probably bifunctional short chain isopr... 35 1.5
UniRef50_A6LMQ9 Cluster: Polyprenyl synthetase; n=1; Thermosipho... 35 1.5
UniRef50_A0JV81 Cluster: Polyprenyl synthetase; n=2; Actinomycet... 35 1.5
UniRef50_Q9V077 Cluster: IdsA-like multifunctional short chain i... 35 1.5
UniRef50_Q9RIY0 Cluster: Putative geranylgeranyl pyrophosphate s... 35 2.0
UniRef50_Q5YXP1 Cluster: Polyprenyl synthase; n=1; Nocardia farc... 35 2.0
UniRef50_Q54193 Cluster: Geranylgeranyl pyrophosphate synthase; ... 35 2.0
UniRef50_Q9YB31 Cluster: Farnesylgeranyl diphosphate synthase; n... 35 2.0
UniRef50_A3DLU2 Cluster: Polyprenyl synthetase; n=1; Staphylothe... 35 2.0
UniRef50_UPI0000499D14 Cluster: hypothetical protein 73.t00020; ... 34 2.6
UniRef50_Q83N10 Cluster: Geranylgeranyl pyrophosphate synthase; ... 34 2.6
UniRef50_Q1V225 Cluster: Octaprenyl-diphosphate synthase; n=3; B... 34 2.6
UniRef50_Q0SF88 Cluster: Polyprenyl synthetase; n=17; Actinomyce... 34 2.6
UniRef50_Q9RUJ1 Cluster: Geranylgeranyl diphosphate synthase; n=... 34 3.5
UniRef50_Q5KSN3 Cluster: Geranylgeranyl diphosphate synthase; n=... 34 3.5
UniRef50_Q8IDD4 Cluster: Ser/Thr protein kinase; n=1; Plasmodium... 34 3.5
UniRef50_A0CE39 Cluster: Chromosome undetermined scaffold_17, wh... 34 3.5
UniRef50_A7IAG2 Cluster: Farnesyltranstransferase; n=1; Candidat... 34 3.5
UniRef50_A6LXN0 Cluster: Polyprenyl synthetase; n=1; Clostridium... 33 4.6
UniRef50_Q9VBE7 Cluster: CG14238-PA; n=5; Endopterygota|Rep: CG1... 33 4.6
UniRef50_Q0UDQ3 Cluster: Putative uncharacterized protein; n=1; ... 33 4.6
UniRef50_UPI0000DAE4B0 Cluster: hypothetical protein Rgryl_01000... 33 6.1
UniRef50_A1SLA1 Cluster: Polyprenyl synthetase; n=1; Nocardioide... 33 6.1
UniRef50_A1R5E5 Cluster: Putative polyprenyl synthetase; n=1; Ar... 33 6.1
UniRef50_Q6KZR8 Cluster: Farnesyl pyrophosphate synthetase/ gera... 33 6.1
UniRef50_Q6F8G0 Cluster: Octaprenyl-diphosphate synthase; n=6; P... 33 8.0
UniRef50_Q0C4D6 Cluster: Polyprenyl synthetase; n=4; Alphaproteo... 33 8.0
UniRef50_Q8ZXZ8 Cluster: Polyprenyl synthetase; n=6; Thermoprote... 33 8.0
>UniRef50_A5A7A5 Cluster: Farnesyl diphosphate synthase 2; n=1;
Bombyx mori|Rep: Farnesyl diphosphate synthase 2 -
Bombyx mori (Silk moth)
Length = 382
Score = 203 bits (495), Expect = 3e-51
Identities = 92/93 (98%), Positives = 93/93 (100%)
Frame = +3
Query: 381 VIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKL 560
VIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLK+
Sbjct: 54 VIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKM 113
Query: 561 ACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPC 659
ACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPC
Sbjct: 114 ACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPC 146
Score = 108 bits (259), Expect = 1e-22
Identities = 50/52 (96%), Positives = 50/52 (96%)
Frame = +2
Query: 221 MSVFNFLKITRKVTYKYWPQLIRYKNNSANMTTASKNLEIINEKKMFDDLLP 376
MSVFN LK TRKVTYKYWPQLIRYKNNSANMTTASKNLEIINEKKMFDDLLP
Sbjct: 1 MSVFNCLKFTRKVTYKYWPQLIRYKNNSANMTTASKNLEIINEKKMFDDLLP 52
>UniRef50_Q1XAB1 Cluster: Farnesyl diphosphate synthase-like
protein; n=2; Choristoneura fumiferana|Rep: Farnesyl
diphosphate synthase-like protein - Choristoneura
fumiferana (Spruce budworm)
Length = 397
Score = 128 bits (308), Expect = 2e-28
Identities = 51/93 (54%), Positives = 73/93 (78%)
Frame = +3
Query: 381 VIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKL 560
++ T+ S+L+EVP++ +WLKK+L YNL GGK RG+TT+ +Y+ +EKPE +TE T+ L
Sbjct: 69 ILNTITTNSELTEVPEVANWLKKVLEYNLAGGKKARGLTTLFAYEMLEKPENITEETIYL 128
Query: 561 ACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPC 659
A LGWCVE+ Q + ++LDDIMDGS+ RRG+PC
Sbjct: 129 AKTLGWCVEILQGFLVMLDDIMDGSTTRRGVPC 161
>UniRef50_A5A7A6 Cluster: Farnesyl diphosphate synthase 3; n=1;
Bombyx mori|Rep: Farnesyl diphosphate synthase 3 -
Bombyx mori (Silk moth)
Length = 385
Score = 122 bits (293), Expect = 1e-26
Identities = 52/93 (55%), Positives = 68/93 (73%)
Frame = +3
Query: 381 VIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKL 560
+I L K +++P++G W+KK+L YN+ GGK RGITTV++Y+ EKPE VTE ++L
Sbjct: 57 IIDNLTTNKKFTQLPELGSWVKKVLEYNVKGGKKIRGITTVLAYELFEKPENVTEEMVRL 116
Query: 561 ACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPC 659
A GWC EM QAY I+ DDIMDGSS RRG+PC
Sbjct: 117 ARVAGWCTEMLQAYLIMNDDIMDGSSTRRGVPC 149
>UniRef50_Q09152 Cluster: Farnesyl pyrophosphate synthetase 1,
mitochondrial precursor (FPP synthetase 1) (FPS 1)
(Farnesyl diphosphate synthetase 1) [Includes:
Dimethylallyltranstransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10)]; n=61;
Spermatophyta|Rep: Farnesyl pyrophosphate synthetase 1,
mitochondrial precursor (FPP synthetase 1) (FPS 1)
(Farnesyl diphosphate synthetase 1) [Includes:
Dimethylallyltranstransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10)] - Arabidopsis
thaliana (Mouse-ear cress)
Length = 384
Score = 91.1 bits (216), Expect = 2e-17
Identities = 38/74 (51%), Positives = 52/74 (70%)
Frame = +3
Query: 438 WLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYCIVLD 617
W+ +ML YN+ GGK RG++ V S+K +++ +TE + L+C LGWC+E QAY +VLD
Sbjct: 76 WVDRMLDYNVRGGKLNRGLSVVDSFKLLKQGNDLTEQEVFLSCALGWCIEWLQAYFLVLD 135
Query: 618 DIMDGSSVRRGMPC 659
DIMD S RRG PC
Sbjct: 136 DIMDNSVTRRGQPC 149
>UniRef50_P0C565 Cluster: Chrysanthemyl diphosphate synthase,
chloroplast precursor; n=2; Anthemideae|Rep:
Chrysanthemyl diphosphate synthase, chloroplast
precursor - Tanacetum cinerariifolium (Dalmatian daisy)
(Chrysanthemumcinerariifolium)
Length = 395
Score = 90.6 bits (215), Expect = 3e-17
Identities = 40/74 (54%), Positives = 52/74 (70%)
Frame = +3
Query: 438 WLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYCIVLD 617
W+++M+ YN+ GGK RG + V SY+ + K E++TE LAC LGWC E QA+ +VLD
Sbjct: 88 WVERMIDYNVPGGKMVRGYSVVDSYQLL-KGEELTEDEAFLACALGWCTEWLQAFILVLD 146
Query: 618 DIMDGSSVRRGMPC 659
DIMDGS RRG PC
Sbjct: 147 DIMDGSHTRRGQPC 160
>UniRef50_Q7KN61 Cluster: GM06581p; n=6; Endopterygota|Rep: GM06581p
- Drosophila melanogaster (Fruit fly)
Length = 419
Score = 87.4 bits (207), Expect = 3e-16
Identities = 36/74 (48%), Positives = 50/74 (67%)
Frame = +3
Query: 438 WLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYCIVLD 617
W ++L YN+ GK RGI TV++YK + + +T +KLA LGWCVEM Q++ I+ D
Sbjct: 113 WFAQVLQYNVPRGKKNRGILTVLTYKNLVPTQDLTPENIKLAQYLGWCVEMLQSFFIISD 172
Query: 618 DIMDGSSVRRGMPC 659
D+MD S+ RRG PC
Sbjct: 173 DVMDNSTTRRGQPC 186
>UniRef50_P14324 Cluster: Farnesyl pyrophosphate synthetase (FPP
synthetase) (FPS) (Farnesyl diphosphate synthetase)
[Includes: Dimethylallyltranstransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10)]; n=44;
Eukaryota|Rep: Farnesyl pyrophosphate synthetase (FPP
synthetase) (FPS) (Farnesyl diphosphate synthetase)
[Includes: Dimethylallyltranstransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10)] - Homo sapiens
(Human)
Length = 353
Score = 85.8 bits (203), Expect = 8e-16
Identities = 38/82 (46%), Positives = 56/82 (68%), Gaps = 3/82 (3%)
Frame = +3
Query: 423 PQIGDW---LKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMF 593
P+IGD LK++L YN +GGK+ RG+T V++++ + +P K +L+ A +GWCVE+
Sbjct: 36 PEIGDAIARLKEVLEYNAIGGKYNRGLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELL 95
Query: 594 QAYCIVLDDIMDGSSVRRGMPC 659
QA+ +V DDIMD S RRG C
Sbjct: 96 QAFFLVADDIMDSSLTRRGQIC 117
>UniRef50_Q01KM5 Cluster: OSIGBa0158D24.4 protein; n=4; Oryza
sativa|Rep: OSIGBa0158D24.4 protein - Oryza sativa
(Rice)
Length = 392
Score = 83.8 bits (198), Expect = 3e-15
Identities = 37/74 (50%), Positives = 49/74 (66%)
Frame = +3
Query: 438 WLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYCIVLD 617
WL +M+ YN+ GGK RG++ + SY +++ +VTE LAC LGWCVE FQA ++LD
Sbjct: 84 WLAQMIDYNVPGGKLNRGLSVIDSYLLLKQGSEVTEDDFFLACVLGWCVEWFQACALLLD 143
Query: 618 DIMDGSSVRRGMPC 659
DIMD S RR C
Sbjct: 144 DIMDDSHTRRDQIC 157
>UniRef50_Q56CY8 Cluster: Farnesyl diphosphate synthase; n=16;
Neoptera|Rep: Farnesyl diphosphate synthase - Anthonomus
grandis (Boll weevil)
Length = 438
Score = 81.8 bits (193), Expect = 1e-14
Identities = 36/93 (38%), Positives = 55/93 (59%)
Frame = +3
Query: 381 VIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKL 560
++ L + E+P + + ++L YN+ GK RG+ + +YK +E P+ +T +KL
Sbjct: 109 LVRELTELGRNPELPDVMRRVARVLQYNVPNGKKNRGLILISAYKMLEDPKNLTPENIKL 168
Query: 561 ACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPC 659
A LGWC+EM + +VLDDIMD S RRG C
Sbjct: 169 ASVLGWCLEMIHSCFLVLDDIMDNSETRRGSLC 201
>UniRef50_P08836 Cluster: Farnesyl pyrophosphate synthetase (FPP
synthetase) (FPS) (Farnesyl diphosphate synthetase)
[Includes: Dimethylallyltranstransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10)]; n=16;
Fungi/Metazoa group|Rep: Farnesyl pyrophosphate
synthetase (FPP synthetase) (FPS) (Farnesyl diphosphate
synthetase) [Includes: Dimethylallyltranstransferase (EC
2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] -
Gallus gallus (Chicken)
Length = 367
Score = 81.4 bits (192), Expect = 2e-14
Identities = 37/82 (45%), Positives = 53/82 (64%), Gaps = 3/82 (3%)
Frame = +3
Query: 423 PQIGDW---LKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMF 593
P++GD LK++L YN GGK RG+T V +Y+ + P + +L+ A +GWC+E+F
Sbjct: 50 PEVGDAVARLKEVLQYNAPGGKCNRGLTVVAAYRELSGPGQKDAESLRCALAVGWCIELF 109
Query: 594 QAYCIVLDDIMDGSSVRRGMPC 659
QA+ +V DDIMD S RRG C
Sbjct: 110 QAFFLVADDIMDQSLTRRGQLC 131
>UniRef50_A4RUB9 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 348
Score = 79.0 bits (186), Expect = 9e-14
Identities = 36/77 (46%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Frame = +3
Query: 435 DWLKKMLHYNLVGGKHTRGITTVISYKTIE--KPEKVTEHTLKLACKLGWCVEMFQAYCI 608
+W+K+M+ YN+ GK RG+ V + ++ K E V E LK A +GWC+E QAY +
Sbjct: 37 EWIKRMIDYNVPHGKLNRGLAVVDGVRALKAAKNETVDEEELKRAMVVGWCIEFLQAYFL 96
Query: 609 VLDDIMDGSSVRRGMPC 659
V DDIMD S RRG PC
Sbjct: 97 VADDIMDESVTRRGQPC 113
>UniRef50_Q54XP0 Cluster: Farnesyl diphosphate synthase; n=3;
Dictyostelium discoideum|Rep: Farnesyl diphosphate
synthase - Dictyostelium discoideum AX4
Length = 382
Score = 77.8 bits (183), Expect = 2e-13
Identities = 35/79 (44%), Positives = 51/79 (64%)
Frame = +3
Query: 423 PQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAY 602
PQ W++KM++ N+ GGK RG+T + S + + + +++ + LA LGWCVE QA+
Sbjct: 63 PQTIAWVEKMINVNVSGGKMNRGLTVLHSLQLLVEGRQLSRSEIFLANVLGWCVEWLQAF 122
Query: 603 CIVLDDIMDGSSVRRGMPC 659
+V DDIMD S RRG PC
Sbjct: 123 FLVADDIMDQSITRRGQPC 141
>UniRef50_Q7FAL6 Cluster: OSJNBa0071I13.18 protein; n=6;
Magnoliophyta|Rep: OSJNBa0071I13.18 protein - Oryza
sativa subsp. japonica (Rice)
Length = 407
Score = 75.8 bits (178), Expect = 9e-13
Identities = 34/74 (45%), Positives = 45/74 (60%)
Frame = +3
Query: 438 WLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYCIVLD 617
W+ KM+ YN+ GGK RG++ V SY + + +V + LAC LGWCVE QA +VLD
Sbjct: 99 WVAKMMDYNVPGGKLNRGLSVVDSYMLLRQGTEVDDEDFYLACVLGWCVEWLQASALVLD 158
Query: 618 DIMDGSSVRRGMPC 659
DI D + RR C
Sbjct: 159 DITDNAYTRRDNLC 172
>UniRef50_Q4RID2 Cluster: Chromosome 8 SCAF15044, whole genome
shotgun sequence; n=3; Tetraodontidae|Rep: Chromosome 8
SCAF15044, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 402
Score = 74.9 bits (176), Expect = 2e-12
Identities = 30/71 (42%), Positives = 48/71 (67%)
Frame = +3
Query: 447 KMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYCIVLDDIM 626
++L YN+ GGK RG++ + S + + P ++T+ ++ A +GWC+E+ QA+ +V DDIM
Sbjct: 68 QVLMYNVPGGKRNRGLSVIGSLRELLPPSELTQDLVQRALLVGWCIELLQAFFLVADDIM 127
Query: 627 DGSSVRRGMPC 659
D S RRG PC
Sbjct: 128 DASVTRRGQPC 138
>UniRef50_P08524 Cluster: Farnesyl pyrophosphate synthetase (FPP
synthetase) (FPS) (Farnesyl diphosphate synthetase)
[Includes: Dimethylallyltranstransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10)]; n=32; Fungi|Rep:
Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)
(Farnesyl diphosphate synthetase) [Includes:
Dimethylallyltranstransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10)] - Saccharomyces
cerevisiae (Baker's yeast)
Length = 352
Score = 71.3 bits (167), Expect = 2e-11
Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Frame = +3
Query: 435 DWLKKMLHYNLVGGKHTRGITTVISYKTIEKP--EKVTEHTLKLACKLGWCVEMFQAYCI 608
DW L+YN GGK RG++ V +Y + E++ + + LGWC+E+ QAY +
Sbjct: 38 DWYAHSLNYNTPGGKLNRGLSVVDTYAILSNKTVEQLGQEEYEKVAILGWCIELLQAYFL 97
Query: 609 VLDDIMDGSSVRRGMPC 659
V DD+MD S RRG PC
Sbjct: 98 VADDMMDKSITRRGQPC 114
>UniRef50_A5DDW6 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 388
Score = 70.9 bits (166), Expect = 2e-11
Identities = 40/88 (45%), Positives = 50/88 (56%), Gaps = 4/88 (4%)
Frame = +3
Query: 408 KLSEVPQIG-DWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTE---HTLKLACKLG 575
KL +P+ W YN+ GGK RG++ V +Y I K +KV E LK LG
Sbjct: 65 KLYSMPEEAIKWFSDSFSYNVPGGKLNRGLSVVDTY-AILKGKKVNELESDELKKVTILG 123
Query: 576 WCVEMFQAYCIVLDDIMDGSSVRRGMPC 659
WCVEM QA+ +V DDIMD + RRG PC
Sbjct: 124 WCVEMLQAFFLVADDIMDKAEKRRGHPC 151
>UniRef50_Q58GE8 Cluster: Geranyl diphosphate synthase; n=1; Ips
pini|Rep: Geranyl diphosphate synthase - Ips pini (Pine
engraver beetle)
Length = 416
Score = 68.9 bits (161), Expect = 1e-10
Identities = 33/92 (35%), Positives = 52/92 (56%)
Frame = +3
Query: 381 VIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKL 560
V+ ++ + E+ I L++ + Y + GK +G+ V +K + P+ +T +KL
Sbjct: 79 VMGQIEKVPQYEEIKPILVRLREAIDYTVPYGKRFKGVHIVSHFKLLADPKFITPENVKL 138
Query: 561 ACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMP 656
+ LGWC E+ QAY +LDDIMD S RRG P
Sbjct: 139 SGVLGWCAEIIQAYFCMLDDIMDDSDTRRGKP 170
>UniRef50_Q5DC19 Cluster: SJCHGC02430 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02430 protein - Schistosoma
japonicum (Blood fluke)
Length = 386
Score = 68.5 bits (160), Expect = 1e-10
Identities = 29/72 (40%), Positives = 42/72 (58%)
Frame = +3
Query: 444 KKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYCIVLDDI 623
+ ++ YNL GK RG+ V+SY + +L +GWCVE+ A +VLDDI
Sbjct: 44 QNVVSYNLSSGKRIRGVLVVLSYLVFRNKNDDPKRSLSFVYLIGWCVELLHAGFLVLDDI 103
Query: 624 MDGSSVRRGMPC 659
+D S++RRG PC
Sbjct: 104 IDNSTLRRGQPC 115
>UniRef50_Q75ND9 Cluster: Farnesyl diphosphate synthase; n=5;
Dikarya|Rep: Farnesyl diphosphate synthase - Lactarius
chrysorrheus (Yellowdrop milkcap) (Agaricus theiogalus)
Length = 381
Score = 66.9 bits (156), Expect = 4e-10
Identities = 34/75 (45%), Positives = 45/75 (60%)
Frame = +3
Query: 435 DWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYCIVL 614
++ ++ + YN+ GGK RG++ V S I K ++TE A LGW VE QAY +V
Sbjct: 57 EYYQRSMDYNVPGGKLNRGMSVVDSV-AILKGRELTESEYFQAAVLGWAVEWMQAYFLVS 115
Query: 615 DDIMDGSSVRRGMPC 659
DDIMD S RRG PC
Sbjct: 116 DDIMDASITRRGQPC 130
>UniRef50_UPI0000DB7C0D Cluster: PREDICTED: similar to Farnesyl
pyrophosphate synthase CG12389-PA, partial; n=7; Apis
mellifera|Rep: PREDICTED: similar to Farnesyl
pyrophosphate synthase CG12389-PA, partial - Apis
mellifera
Length = 545
Score = 64.1 bits (149), Expect = 3e-09
Identities = 28/85 (32%), Positives = 48/85 (56%)
Frame = +3
Query: 402 KSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWC 581
K E+ + W+ ++L YN+ G R ++ VI+ K + ++TE +LA L WC
Sbjct: 243 KDNNEELLDVNKWITEVLEYNVPKGGKRRSVSFVIACKLLTSQNQLTEENTRLAHILAWC 302
Query: 582 VEMFQAYCIVLDDIMDGSSVRRGMP 656
+E+ QA + DDI+D +++RR P
Sbjct: 303 IEIMQAVHTMADDILDHANMRRNQP 327
>UniRef50_Q4QBL1 Cluster: Farnesyl pyrophosphate synthase, putative;
n=11; Trypanosomatidae|Rep: Farnesyl pyrophosphate
synthase, putative - Leishmania major
Length = 362
Score = 62.9 bits (146), Expect = 7e-09
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Frame = +3
Query: 438 WLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVT----EHTLKLACKLGWCVEMFQAYC 605
+LK M+ +GGK+ RG+ V + + K ++ E L AC GW +EM QA+
Sbjct: 35 YLKSMMDTTCLGGKYNRGLCVVDVAEAMAKDTQMDAAAMERVLHDACVCGWMIEMLQAHF 94
Query: 606 IVLDDIMDGSSVRRGMPC 659
+V DDIMD S RRG PC
Sbjct: 95 LVEDDIMDHSKTRRGKPC 112
>UniRef50_A5K4U6 Cluster: Farnesyl pyrophosphate synthase, putative;
n=7; Plasmodium|Rep: Farnesyl pyrophosphate synthase,
putative - Plasmodium vivax
Length = 375
Score = 62.5 bits (145), Expect = 9e-09
Identities = 29/77 (37%), Positives = 43/77 (55%)
Frame = +3
Query: 429 IGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYCI 608
I + K + YN +GGK+ RGI ++ Y+ ++ + + K AC L WC+E+ QA +
Sbjct: 44 ISKYYKLLFDYNCLGGKNNRGILVILIYEYVKNRDINSSEWEKAAC-LAWCIEILQAAFL 102
Query: 609 VLDDIMDGSSVRRGMPC 659
V DDIMD RR C
Sbjct: 103 VADDIMDKGETRRNKYC 119
>UniRef50_A2R6Y8 Cluster: Contig An16c0060, complete genome; n=1;
Aspergillus niger|Rep: Contig An16c0060, complete genome
- Aspergillus niger
Length = 349
Score = 61.3 bits (142), Expect = 2e-08
Identities = 31/78 (39%), Positives = 44/78 (56%)
Frame = +3
Query: 426 QIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYC 605
++ ++++K + N GK RG++ + +I VTE C LGW VE+ QAY
Sbjct: 33 EVKNYVEKCFYENSTNGKMLRGLSVPQTGLSI-LGRPVTEQEYHDLCVLGWLVELLQAYL 91
Query: 606 IVLDDIMDGSSVRRGMPC 659
+ DDIMD SS RRG PC
Sbjct: 92 LTHDDIMDNSSTRRGKPC 109
>UniRef50_A7AX33 Cluster: Farnesyl pyrophosphate synthetase ,
putative; n=1; Babesia bovis|Rep: Farnesyl pyrophosphate
synthetase , putative - Babesia bovis
Length = 336
Score = 54.8 bits (126), Expect = 2e-06
Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Frame = +3
Query: 453 LHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLG--WCVEMFQAYCIVLDDIM 626
+ YNL GGK RG V + + I + ++E+ KLA LG WCVE+ Q +V DDIM
Sbjct: 52 IQYNLQGGKLIRGTLVVATTRCI-LGDNISEYQWKLALILGMGWCVELLQTAFLVADDIM 110
Query: 627 DGSSVRRGMPC 659
D S +RR C
Sbjct: 111 DKSVMRRSNLC 121
>UniRef50_A2E130 Cluster: Polyprenyl synthetase family protein; n=2;
Trichomonas vaginalis G3|Rep: Polyprenyl synthetase
family protein - Trichomonas vaginalis G3
Length = 334
Score = 53.2 bits (122), Expect = 5e-06
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Frame = +3
Query: 435 DWLKK----MLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAY 602
DW++K ML Y+ GGK RGI T Y + +E K+ LGW E+ A
Sbjct: 28 DWVQKHCIDMLEYSTKGGKMLRGIMTAAVYLELTGYSPDSEEA-KVGYYLGWVEEIIHAG 86
Query: 603 CIVLDDIMDGSSVRRGMPC 659
++ DD+MD S RRG C
Sbjct: 87 YLIADDLMDQSETRRGQEC 105
>UniRef50_Q0CIT1 Cluster: Putative uncharacterized protein; n=1;
Aspergillus terreus NIH2624|Rep: Putative
uncharacterized protein - Aspergillus terreus (strain
NIH 2624)
Length = 342
Score = 52.4 bits (120), Expect = 9e-06
Identities = 33/77 (42%), Positives = 41/77 (53%)
Frame = +3
Query: 429 IGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYCI 608
I D L++ L N GK RG+T V + T+ + L+ LGW VEMFQA +
Sbjct: 31 IRDRLQQCLLANTKDGKLNRGLTVVDTGCTLLQRPPTPAEFQDLSI-LGWMVEMFQASYL 89
Query: 609 VLDDIMDGSSVRRGMPC 659
V DDIMD S RRG C
Sbjct: 90 VSDDIMDNSEYRRGKLC 106
>UniRef50_Q5CLA5 Cluster: Farnesyl pyrophosphate synthase; n=3;
Cryptosporidium|Rep: Farnesyl pyrophosphate synthase -
Cryptosporidium hominis
Length = 353
Score = 51.2 bits (117), Expect = 2e-05
Identities = 26/69 (37%), Positives = 34/69 (49%)
Frame = +3
Query: 453 LHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYCIVLDDIMDG 632
+ YN+ GKH RG V+ + ++ L LGW VE QA ++ DDIMD
Sbjct: 49 IDYNVKKGKHIRGKILVLISSLSSAYSNIKRDSIYL---LGWVVEAIQALILIADDIMDS 105
Query: 633 SSVRRGMPC 659
RRG PC
Sbjct: 106 GKFRRGAPC 114
>UniRef50_O59703 Cluster: Farnesyl pyrophosphate synthetase; n=1;
Schizosaccharomyces pombe|Rep: Farnesyl pyrophosphate
synthetase - Schizosaccharomyces pombe (Fission yeast)
Length = 351
Score = 50.4 bits (115), Expect = 4e-05
Identities = 27/79 (34%), Positives = 43/79 (54%)
Frame = +3
Query: 423 PQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAY 602
P+ + L + N +GGK+ RG+ + S ++ E + E + A LGW +E+ Q
Sbjct: 37 PEETEKLLYSIKRNTLGGKNNRGLAVLQSLTSLINRE-LEEAEFRDAALLGWLIEILQGC 95
Query: 603 CIVLDDIMDGSSVRRGMPC 659
++ DDIMD S RRG+ C
Sbjct: 96 FLMADDIMDQSIKRRGLDC 114
>UniRef50_O62336 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 352
Score = 49.2 bits (112), Expect = 9e-05
Identities = 20/72 (27%), Positives = 39/72 (54%)
Frame = +3
Query: 444 KKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYCIVLDDI 623
+ + ++GGK++R V + + ++ + L+ C+ +E+ Q++ ++ DDI
Sbjct: 42 RNLFDNTVIGGKYSRASLCVDTIRALQPHLRDETQELQAVCEAAATLEIIQSFYLIADDI 101
Query: 624 MDGSSVRRGMPC 659
MD S RRG PC
Sbjct: 102 MDNSETRRGKPC 113
>UniRef50_A2EN50 Cluster: Polyprenyl synthetase family protein; n=1;
Trichomonas vaginalis G3|Rep: Polyprenyl synthetase
family protein - Trichomonas vaginalis G3
Length = 338
Score = 48.4 bits (110), Expect = 2e-04
Identities = 24/70 (34%), Positives = 38/70 (54%)
Frame = +3
Query: 450 MLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYCIVLDDIMD 629
++ Y + GGK RG+ +V + + ++ + A LGW E+ QA +V DD+MD
Sbjct: 38 LVDYTIAGGKCLRGLLSVFGFLELTGYSPDSKEA-EAAYALGWVQEILQASFLVADDLMD 96
Query: 630 GSSVRRGMPC 659
S +RR PC
Sbjct: 97 KSPLRRDKPC 106
>UniRef50_Q8SQS0 Cluster: FARNESYL PYROPHOSPHATE SYNTHETASE; n=1;
Encephalitozoon cuniculi|Rep: FARNESYL PYROPHOSPHATE
SYNTHETASE - Encephalitozoon cuniculi
Length = 292
Score = 48.4 bits (110), Expect = 2e-04
Identities = 28/70 (40%), Positives = 39/70 (55%)
Frame = +3
Query: 450 MLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYCIVLDDIMD 629
+L YNL GGK R V K + E E+ + +G+ VE+ QA +++DDIMD
Sbjct: 25 LLDYNLGGGKELRYKAYVHVLKALNG-EVSMENLI-----MGYSVELLQAVLLIVDDIMD 78
Query: 630 GSSVRRGMPC 659
S +RRG PC
Sbjct: 79 NSKIRRGKPC 88
>UniRef50_UPI00005A15CB Cluster: PREDICTED: similar to Farnesyl
pyrophosphate synthetase (FPP synthetase) (FPS)
(Farnesyl diphosphate synthetase); n=2; Eutheria|Rep:
PREDICTED: similar to Farnesyl pyrophosphate synthetase
(FPP synthetase) (FPS) (Farnesyl diphosphate synthetase)
- Canis familiaris
Length = 262
Score = 44.4 bits (100), Expect = 0.002
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +3
Query: 519 IEKPEKVTEHTLKLACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPC 659
I + ++V E+ A +GWC+E+ QA+ +V DDIMD S ++G C
Sbjct: 42 IAQLKEVLEYNAVGALTVGWCMELLQAFFLVSDDIMDSSLTQQGQIC 88
>UniRef50_Q197X6 Cluster: Farnesyl diphosphate synthase; n=2;
Toxoplasma gondii|Rep: Farnesyl diphosphate synthase -
Toxoplasma gondii
Length = 646
Score = 44.4 bits (100), Expect = 0.002
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 570 LGWCVEMFQAYCIVLDDIMDGSSVRRGMPC 659
LGWCVE+ Q+ +V+DD+MD S RRG C
Sbjct: 316 LGWCVELLQSCFLVMDDVMDHSLTRRGKQC 345
>UniRef50_UPI00005A125B Cluster: PREDICTED: similar to Farnesyl
pyrophosphate synthetase (FPP synthetase) (FPS)
(Farnesyl diphosphate synthetase); n=1; Canis lupus
familiaris|Rep: PREDICTED: similar to Farnesyl
pyrophosphate synthetase (FPP synthetase) (FPS)
(Farnesyl diphosphate synthetase) - Canis familiaris
Length = 259
Score = 43.2 bits (97), Expect = 0.006
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = +3
Query: 534 KVTEHTLKLACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPC 659
K +L+ A +GWCVE+ QA+ +V DDIMD + R G C
Sbjct: 26 KAVGGSLRRALSVGWCVELLQAFFLVSDDIMDLTLTRWGQIC 67
>UniRef50_Q7R2I4 Cluster: GLP_623_14387_13164; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_623_14387_13164 - Giardia lamblia
ATCC 50803
Length = 407
Score = 43.2 bits (97), Expect = 0.006
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 8/82 (9%)
Frame = +3
Query: 435 DWLKKMLHYNLVGGKHTRG-ITTVISYKTIE-------KPEKVTEHTLKLACKLGWCVEM 590
D + +++ YN+VGGK TRG + I +T+ + +E LA + E+
Sbjct: 52 DHIVEVIKYNVVGGKMTRGTLAADIFLQTVRFLFSGLLEDSNFSEELFNLAIDICLVQEI 111
Query: 591 FQAYCIVLDDIMDGSSVRRGMP 656
Q +++DD++D S++RRG P
Sbjct: 112 LQGAFLMIDDVIDHSTIRRGKP 133
>UniRef50_Q79ZL1 Cluster: Polyprenyl diphosphate synthase; n=4;
Streptomyces|Rep: Polyprenyl diphosphate synthase -
Streptomyces avermitilis
Length = 413
Score = 42.3 bits (95), Expect = 0.010
Identities = 24/74 (32%), Positives = 38/74 (51%)
Frame = +3
Query: 435 DWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYCIVL 614
D +++ + L GGK TR +++ P E L++ G +E+ Q +V
Sbjct: 60 DIAERVARFTLDGGKRTRSQFVWWAHRACGGPAAGAEAALRV----GAALELIQTCALVH 115
Query: 615 DDIMDGSSVRRGMP 656
DD+MDGS +RRG P
Sbjct: 116 DDVMDGSRLRRGRP 129
>UniRef50_Q0JWJ4 Cluster: Putative geranylgeranyl diphosphate
synthase; n=1; Streptomyces ambofaciens|Rep: Putative
geranylgeranyl diphosphate synthase - Streptomyces
ambofaciens
Length = 357
Score = 42.3 bits (95), Expect = 0.010
Identities = 27/84 (32%), Positives = 43/84 (51%)
Frame = +3
Query: 405 SKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCV 584
++ S P++ + L+ L GGK R + V+ + E L++A L
Sbjct: 36 ARRSHPPEVANTLRAFL---AAGGKRVRALLCVVGWHAAGGSEDRAA-VLRVAASL---- 87
Query: 585 EMFQAYCIVLDDIMDGSSVRRGMP 656
E+F A+ ++ DDIMD S+VRRG P
Sbjct: 88 ELFVAFALIHDDIMDDSAVRRGRP 111
>UniRef50_Q4UAU6 Cluster: Farnesyl pyrophosphate synthetase,
putative; n=2; Theileria|Rep: Farnesyl pyrophosphate
synthetase, putative - Theileria annulata
Length = 384
Score = 42.3 bits (95), Expect = 0.010
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 12/81 (14%)
Frame = +3
Query: 453 LHYNLVGGKHTRG---ITTVISYKTIEKPEKVTEHTLKLACK---------LGWCVEMFQ 596
+ YNL GGK RG ++TV S PE + TL + + WCVE+ Q
Sbjct: 51 VQYNLQGGKMLRGTMVLSTVKSLCGTNIPENLMTQTLIVGMYNSNHLKQFIVAWCVELLQ 110
Query: 597 AYCIVLDDIMDGSSVRRGMPC 659
+V DDI+D S+ RR C
Sbjct: 111 TSFLVADDIIDKSTKRRSNTC 131
>UniRef50_A1R1M5 Cluster: Putative geranylgeranyl pyrophosphate
synthase; n=1; Arthrobacter aurescens TC1|Rep: Putative
geranylgeranyl pyrophosphate synthase - Arthrobacter
aurescens (strain TC1)
Length = 369
Score = 41.9 bits (94), Expect = 0.013
Identities = 19/65 (29%), Positives = 33/65 (50%)
Frame = +3
Query: 462 NLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYCIVLDDIMDGSSV 641
N++GGK R + + +Y + K H + A + +E+ ++ DD++DG V
Sbjct: 50 NVLGGKFVRPLLLMETYDALHKHGPAEPHQRETAISIAAAIELLHYAFLLHDDVIDGDLV 109
Query: 642 RRGMP 656
RRG P
Sbjct: 110 RRGHP 114
>UniRef50_A2ZWU6 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 306
Score = 41.1 bits (92), Expect = 0.023
Identities = 27/70 (38%), Positives = 34/70 (48%)
Frame = +3
Query: 450 MLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYCIVLDDIMD 629
ML YN++GG+ ++ KP T + GW QAY +VLDDIMD
Sbjct: 52 MLDYNVLGGEKN-----MLFRNNATKPNNGT-------LRYGW---QLQAYFLVLDDIMD 96
Query: 630 GSSVRRGMPC 659
S RRG PC
Sbjct: 97 NSQTRRGKPC 106
>UniRef50_UPI000038E5D8 Cluster: hypothetical protein Faci_03001280;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001280 - Ferroplasma acidarmanus fer1
Length = 352
Score = 40.7 bits (91), Expect = 0.030
Identities = 24/77 (31%), Positives = 40/77 (51%)
Frame = +3
Query: 426 QIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYC 605
+I D + K+ + L GGK R I ++ Y + E +K + +E+ Q++
Sbjct: 38 RIKDIIIKLRDFTLNGGKRLRPILMIMGYNMFSGQD---ERIIKASIS----IELAQSFL 90
Query: 606 IVLDDIMDGSSVRRGMP 656
++ DDIMD S +RRG P
Sbjct: 91 LIHDDIMDQSDMRRGKP 107
>UniRef50_Q3SAB7 Cluster: Geranylgeranyl pyrophosphate synthase;
n=1; uncultured euryarchaeote Alv-FOS1|Rep:
Geranylgeranyl pyrophosphate synthase - uncultured
euryarchaeote Alv-FOS1
Length = 352
Score = 39.5 bits (88), Expect = 0.070
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Frame = +3
Query: 402 KSKLSEV--PQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLG 575
+ K +EV P + + ++ + Y L GGK R + ++ Y+ + + +K A L
Sbjct: 25 EKKKTEVNHPLLREAVEIIEEYTLRGGKRVRALLMILGYRMYGGKD---DEIIKAAATL- 80
Query: 576 WCVEMFQAYCIVLDDIMDGSSVRRG 650
E+ Q+Y ++ DDIMD S +RRG
Sbjct: 81 ---ELVQSYFLIHDDIMDESDLRRG 102
>UniRef50_A2SRA1 Cluster: Polyprenyl synthetase; n=3;
Methanomicrobiales|Rep: Polyprenyl synthetase -
Methanocorpusculum labreanum (strain ATCC 43576 / DSM
4855 / Z)
Length = 322
Score = 39.5 bits (88), Expect = 0.070
Identities = 25/71 (35%), Positives = 35/71 (49%)
Frame = +3
Query: 444 KKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYCIVLDDI 623
K H + GGK R ++S ++I K +E + A L W + +V DDI
Sbjct: 31 KAASHLLVSGGKRLRPALVLLSAESIRKG--ASEDIFQAALALEWT----HTFTLVHDDI 84
Query: 624 MDGSSVRRGMP 656
MDG S+RRG P
Sbjct: 85 MDGDSLRRGRP 95
>UniRef50_Q55EU7 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 393
Score = 38.7 bits (86), Expect = 0.12
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 13/88 (14%)
Frame = +3
Query: 435 DWLKKMLHY-NLVGGKHTRGITTVISYKTI------------EKPEKVTEHTLKLACKLG 575
D++K++L+ + GGK RG+ + S T+ K +E + A +G
Sbjct: 42 DYIKELLNSPTITGGKMYRGLGFLYSLNTLLIAKNNFDNNNNNNNNKNSETSQHEARIIG 101
Query: 576 WCVEMFQAYCIVLDDIMDGSSVRRGMPC 659
WC+E F ++ ++ DDIMD RRG C
Sbjct: 102 WCLE-FLSFFLITDDIMDNGLTRRGELC 128
>UniRef50_P74906 Cluster: Geranylgeranyl diphosphate synthetase;
n=4; Thermus thermophilus|Rep: Geranylgeranyl
diphosphate synthetase - Thermus thermophilus
Length = 344
Score = 37.9 bits (84), Expect = 0.21
Identities = 24/62 (38%), Positives = 31/62 (50%)
Frame = +3
Query: 471 GGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYCIVLDDIMDGSSVRRG 650
GGK RG+ TV S P L+ + +E+FQ + +V DDI DGS RRG
Sbjct: 38 GGKMLRGLLTVYSALAHGAP-------LEAGLETATALELFQNWVLVHDDIEDGSEERRG 90
Query: 651 MP 656
P
Sbjct: 91 RP 92
>UniRef50_Q97C41 Cluster: Farnesyl pyrophosphate synthase; n=3;
Thermoplasmatales|Rep: Farnesyl pyrophosphate synthase -
Thermoplasma volcanium
Length = 354
Score = 37.9 bits (84), Expect = 0.21
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +3
Query: 441 LKKMLHYNLVGGKHTRGITTVISYKTIEKPEK-VTEHTLKLACKLGWCVEMFQAYCIVLD 617
+K + Y GGK R I ++ Y+ EK + + ++ +E+ Q+Y ++ D
Sbjct: 43 IKIIRDYTEGGGKRLRPIFMILGYRLFSPEEKGIFDASIS--------IELAQSYLLIHD 94
Query: 618 DIMDGSSVRRGMP 656
D++D S VRRG P
Sbjct: 95 DVIDKSDVRRGKP 107
>UniRef50_A3CXK9 Cluster: Polyprenyl synthetase; n=1; Methanoculleus
marisnigri JR1|Rep: Polyprenyl synthetase -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 295
Score = 37.5 bits (83), Expect = 0.28
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = +3
Query: 474 GKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYCIVLDDIMDGSSVRRGM 653
GK R + + + + T L LAC VE+ A ++LDD++DG + RRG+
Sbjct: 40 GKRMRAGLLLYIHAGLARTAAPTRQALDLAC----AVELAHAASLILDDMLDGDTARRGV 95
Query: 654 P 656
P
Sbjct: 96 P 96
>UniRef50_P54383 Cluster: Geranyltranstransferase; n=27;
Bacteria|Rep: Geranyltranstransferase - Bacillus
subtilis
Length = 272
Score = 37.5 bits (83), Expect = 0.28
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Frame = +3
Query: 390 TLQNK-SKLSEVPQIGDWLKKMLHYNL-VGGKHTRGITTVISYKTIEKPEKVTEHTLKLA 563
T++N+ S +E + D LKK + Y+L GGK R + + K EK
Sbjct: 15 TIENQLSVYTEKLDMPDSLKKSMLYSLQAGGKRLRPLIVLAVLNAYGKSEKD-------G 67
Query: 564 CKLGWCVEMFQAYCIVLDDI--MDGSSVRRGMP 656
+G VEM Y ++ DD+ MD +RRG P
Sbjct: 68 IPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKP 100
>UniRef50_A3TKC8 Cluster: Putative polyprenyl synthase /
dimethylallyltranstransferase; n=1; Janibacter sp.
HTCC2649|Rep: Putative polyprenyl synthase /
dimethylallyltranstransferase - Janibacter sp. HTCC2649
Length = 366
Score = 37.1 bits (82), Expect = 0.37
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +3
Query: 567 KLGWCVEMFQAYCIVLDDIMDGSSVRRGMP 656
+L +E FQA ++ DD+MD S RRGMP
Sbjct: 80 RLATAMEFFQAAALIHDDVMDDSDTRRGMP 109
>UniRef50_Q58270 Cluster: Bifunctional short chain isoprenyl
diphosphate synthase [Includes: Farnesyl pyrophosphate
synthetase (EC 2.5.1.1) (FPP synthetase)
(Dimethylallyltranstransferase); Geranyltranstransferase
(EC 2.5.1.10)]; n=6; Methanococcales|Rep: Bifunctional
short chain isoprenyl diphosphate synthase [Includes:
Farnesyl pyrophosphate synthetase (EC 2.5.1.1) (FPP
synthetase) (Dimethylallyltranstransferase);
Geranyltranstransferase (EC 2.5.1.10)] - Methanococcus
jannaschii
Length = 327
Score = 37.1 bits (82), Expect = 0.37
Identities = 24/67 (35%), Positives = 32/67 (47%)
Frame = +3
Query: 456 HYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYCIVLDDIMDGS 635
H GGK R TV++Y ++K + E L A VE+ Y ++ DDIMD
Sbjct: 41 HLLFAGGKRIRPYLTVVTYM-LKKDD--IEEVLPAAA----AVELIHNYTLIHDDIMDND 93
Query: 636 SVRRGMP 656
RRG P
Sbjct: 94 DERRGKP 100
>UniRef50_Q9RVU0 Cluster: Polyprenyl synthase; n=4; Deinococci|Rep:
Polyprenyl synthase - Deinococcus radiodurans
Length = 320
Score = 36.7 bits (81), Expect = 0.49
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Frame = +3
Query: 471 GGKHTRGITTVISYKTIEK-PEKV-TEHTLKLACKLGWCVEMFQAYCIVLDDIMDGSSVR 644
GGK R + T+++ + + P+ + T H+ +L CVE+ + ++ DD++D S R
Sbjct: 32 GGKRVRPLVTLLAAQALGAGPDALATSHSWDELLRLSVCVELLHSASLLHDDLIDDSDKR 91
Query: 645 RG 650
RG
Sbjct: 92 RG 93
>UniRef50_Q8NT37 Cluster: Geranylgeranyl pyrophosphate synthase;
n=14; Corynebacterineae|Rep: Geranylgeranyl
pyrophosphate synthase - Corynebacterium glutamicum
(Brevibacterium flavum)
Length = 350
Score = 36.7 bits (81), Expect = 0.49
Identities = 22/69 (31%), Positives = 39/69 (56%)
Frame = +3
Query: 450 MLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYCIVLDDIMD 629
++H GGK R + +++ + EKP ++E+ +K A VE+ + DD+MD
Sbjct: 64 VMHLTRAGGKRFRPMFALLASEFGEKP--LSENVIKAAV----VVEITHLATLYHDDVMD 117
Query: 630 GSSVRRGMP 656
+S+RRG+P
Sbjct: 118 EASMRRGVP 126
>UniRef50_A7BDF8 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 367
Score = 35.9 bits (79), Expect = 0.86
Identities = 22/62 (35%), Positives = 32/62 (51%)
Frame = +3
Query: 471 GGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYCIVLDDIMDGSSVRRG 650
GGK R + + Y + V E +L L +E++QA +V DDI+D + RRG
Sbjct: 48 GGKRFRALMAHVGY-ALSSGTSVEEVSLP---HLSAALELYQASALVHDDIIDKADERRG 103
Query: 651 MP 656
MP
Sbjct: 104 MP 105
>UniRef50_A2RHR5 Cluster: Prenyl transferase; n=3; Lactococcus
lactis|Rep: Prenyl transferase - Lactococcus lactis
subsp. cremoris (strain MG1363)
Length = 326
Score = 35.5 bits (78), Expect = 1.1
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = +3
Query: 471 GGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYCIVLDDIMDGSSVRRG 650
GGK R ++ + K E +K+A L EM + ++ DDI+D S +RRG
Sbjct: 44 GGKMVRPALFLLFAGIVPNGSKDEEKLIKIAASL----EMLHSATLIHDDIIDDSPLRRG 99
Query: 651 MP 656
MP
Sbjct: 100 MP 101
>UniRef50_A7DRA7 Cluster: Polyprenyl synthetase; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Polyprenyl synthetase
- Candidatus Nitrosopumilus maritimus SCM1
Length = 283
Score = 35.5 bits (78), Expect = 1.1
Identities = 23/65 (35%), Positives = 34/65 (52%)
Frame = +3
Query: 453 LHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYCIVLDDIMDG 632
L Y+L GGK R I +S ++I KV ++T +C VE I+ DDI+D
Sbjct: 42 LKYSLEGGKRIRPIILTLSAESI---GKVDDNTFAASC----AVEFLHMESIIHDDIIDN 94
Query: 633 SSVRR 647
++RR
Sbjct: 95 ETMRR 99
>UniRef50_Q8G4G0 Cluster: Probably bifunctional short chain
isoprenyl diphosphate synthase [includes: farnesyl
pyrophosphate synthetase (Fpp synthetase)
(Dimethylallyltransferase); geranyltranstransferase ];
n=4; Bifidobacterium|Rep: Probably bifunctional short
chain isoprenyl diphosphate synthase [includes: farnesyl
pyrophosphate synthetase (Fpp synthetase)
(Dimethylallyltransferase); geranyltranstransferase ] -
Bifidobacterium longum
Length = 372
Score = 35.1 bits (77), Expect = 1.5
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = +3
Query: 471 GGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYCIVLDDIMDGSSVRRG 650
GGK R + + ++ + VT L +E+FQ +V DDI+D S +RRG
Sbjct: 64 GGKRLRALLALDAFDILAGD--VTPDRRDAMIDLACAIEVFQTAALVHDDIIDESDLRRG 121
Query: 651 MP 656
P
Sbjct: 122 KP 123
>UniRef50_A6LMQ9 Cluster: Polyprenyl synthetase; n=1; Thermosipho
melanesiensis BI429|Rep: Polyprenyl synthetase -
Thermosipho melanesiensis BI429
Length = 332
Score = 35.1 bits (77), Expect = 1.5
Identities = 21/76 (27%), Positives = 40/76 (52%)
Frame = +3
Query: 429 IGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYCI 608
+G+ ++++ + L GK R + ++ + KV E K+A +E+ ++ +
Sbjct: 31 VGNLVEELKKFCLRPGKRIRPLLFILGVEGFGG--KVDETVYKIAAT----IEIMHSFLL 84
Query: 609 VLDDIMDGSSVRRGMP 656
+ DDIMD S +RRG P
Sbjct: 85 IHDDIMDQSELRRGQP 100
>UniRef50_A0JV81 Cluster: Polyprenyl synthetase; n=2;
Actinomycetales|Rep: Polyprenyl synthetase -
Arthrobacter sp. (strain FB24)
Length = 364
Score = 35.1 bits (77), Expect = 1.5
Identities = 25/85 (29%), Positives = 38/85 (44%)
Frame = +3
Query: 402 KSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWC 581
+S +S + Q D L + + GGK R + ++ TE G
Sbjct: 30 QSVMSAISQDIDPLMGSISNLVTGGKRLRALMCYWGWRGAGGEAAATE-----VVTAGSA 84
Query: 582 VEMFQAYCIVLDDIMDGSSVRRGMP 656
+E+FQA ++ DDI+D S RRG P
Sbjct: 85 LELFQAAALIHDDIIDRSDTRRGGP 109
>UniRef50_Q9V077 Cluster: IdsA-like multifunctional short chain
isoprenyl diphosphate synthase; n=4;
Thermococcaceae|Rep: IdsA-like multifunctional short
chain isoprenyl diphosphate synthase - Pyrococcus abyssi
Length = 346
Score = 35.1 bits (77), Expect = 1.5
Identities = 24/67 (35%), Positives = 30/67 (44%)
Frame = +3
Query: 456 HYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYCIVLDDIMDGS 635
HY L GGK R + + E V + LK A +E+ Y +V DDIMD
Sbjct: 44 HYPLAGGKRIR------PFVVLTATEAVGGNALK-AIYPAVAIELIHNYSLVHDDIMDMD 96
Query: 636 SVRRGMP 656
RRG P
Sbjct: 97 ETRRGKP 103
>UniRef50_Q9RIY0 Cluster: Putative geranylgeranyl pyrophosphate
synthase; n=1; Streptomyces coelicolor|Rep: Putative
geranylgeranyl pyrophosphate synthase - Streptomyces
coelicolor
Length = 392
Score = 34.7 bits (76), Expect = 2.0
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +3
Query: 567 KLGWCVEMFQAYCIVLDDIMDGSSVRRGMP 656
+ G +E+ QA +V DD+MDGS RRG P
Sbjct: 103 RTGAALELLQACALVHDDVMDGSVQRRGAP 132
>UniRef50_Q5YXP1 Cluster: Polyprenyl synthase; n=1; Nocardia
farcinica|Rep: Polyprenyl synthase - Nocardia farcinica
Length = 385
Score = 34.7 bits (76), Expect = 2.0
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +3
Query: 456 HYNLVGGKHTRGITTVISYKTIEKPEKVTEH-TLKLACKLGWCVEMFQAYCIVLDDIMDG 632
H GK R + + I P+ H L +AC W EMF +V DDI DG
Sbjct: 95 HILTAPGKRVRAGLALACAQLIPSPDAAPVHDALDIACV--W--EMFHESSLVHDDICDG 150
Query: 633 SSVRRGMP 656
S +RR P
Sbjct: 151 SPLRRDAP 158
>UniRef50_Q54193 Cluster: Geranylgeranyl pyrophosphate synthase;
n=2; Streptomyces griseus|Rep: Geranylgeranyl
pyrophosphate synthase - Streptomyces griseus
Length = 425
Score = 34.7 bits (76), Expect = 2.0
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +3
Query: 561 ACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMP 656
A +LG +E+ Q+ ++ DD+MD S +RRG P
Sbjct: 106 ALRLGVALELIQSCALIHDDVMDRSRLRRGKP 137
>UniRef50_Q9YB31 Cluster: Farnesylgeranyl diphosphate synthase; n=2;
Aeropyrum pernix|Rep: Farnesylgeranyl diphosphate
synthase - Aeropyrum pernix
Length = 332
Score = 34.7 bits (76), Expect = 2.0
Identities = 21/68 (30%), Positives = 32/68 (47%)
Frame = +3
Query: 453 LHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYCIVLDDIMDG 632
LH GGK R + T+++ + + E A L +E + ++ DDIMD
Sbjct: 37 LHLIKAGGKRLRPLITLLTARMLGGLEAEAR-----AIPLAASIETAHTFSLIHDDIMDR 91
Query: 633 SSVRRGMP 656
VRRG+P
Sbjct: 92 DEVRRGVP 99
>UniRef50_A3DLU2 Cluster: Polyprenyl synthetase; n=1;
Staphylothermus marinus F1|Rep: Polyprenyl synthetase -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 365
Score = 34.7 bits (76), Expect = 2.0
Identities = 23/66 (34%), Positives = 30/66 (45%)
Frame = +3
Query: 459 YNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYCIVLDDIMDGSS 638
Y L GGK R +I Y + K + L +E Q+Y +V DDIMD
Sbjct: 47 YTLRGGKRLRAFLVLIGYWS----RKWGYGNIDSIKYLMAGIEFLQSYLLVHDDIMDEDE 102
Query: 639 VRRGMP 656
+RRG P
Sbjct: 103 IRRGGP 108
>UniRef50_UPI0000499D14 Cluster: hypothetical protein 73.t00020;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 73.t00020 - Entamoeba histolytica HM-1:IMSS
Length = 987
Score = 34.3 bits (75), Expect = 2.6
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = -3
Query: 375 GRRSSNIFFSLIISRFFEAVVIFALLFLYLISCGQYLYVTLRVILRKLN 229
G + N FS I F + I L +LY I CG+ Y++++ I R N
Sbjct: 603 GMKFKNDLFSAFIYSFEHDISIGILFYLYTICCGESNYMSIKEIKRAFN 651
>UniRef50_Q83N10 Cluster: Geranylgeranyl pyrophosphate synthase;
n=2; Tropheryma whipplei|Rep: Geranylgeranyl
pyrophosphate synthase - Tropheryma whipplei (strain
Twist) (Whipple's bacillus)
Length = 379
Score = 34.3 bits (75), Expect = 2.6
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +3
Query: 537 VTEHTLKLACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMP 656
+ E+ +L + +E+F A +V DD++D S RRG+P
Sbjct: 81 IPENLFELISDIAVAIELFHAAALVHDDLIDKSDSRRGLP 120
>UniRef50_Q1V225 Cluster: Octaprenyl-diphosphate synthase; n=3;
Bacteria|Rep: Octaprenyl-diphosphate synthase -
Candidatus Pelagibacter ubique HTCC1002
Length = 337
Score = 34.3 bits (75), Expect = 2.6
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Frame = +3
Query: 363 TISSLXVIMTLQNKSKL-SEVPQIGDWLKKMLHYNL-VGGKHTRGITTVISYKTIEKPEK 536
++ V++ + KSKL S+V D ++KM Y++ GGK R + T+ S K +
Sbjct: 21 SVDEKLVLVEEKIKSKLLSDV----DLVQKMTEYHIDTGGKRLRALLTLGSAKLCGYTKG 76
Query: 537 VTEHTLKLACKLGWCVEMFQAYCIVLDDIMDGSSVRRG 650
+ + LA CVEM ++ DD++D ++RRG
Sbjct: 77 GRD--INLAA----CVEMIHGATLMHDDVIDLGNIRRG 108
>UniRef50_Q0SF88 Cluster: Polyprenyl synthetase; n=17;
Actinomycetales|Rep: Polyprenyl synthetase - Rhodococcus
sp. (strain RHA1)
Length = 346
Score = 34.3 bits (75), Expect = 2.6
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +3
Query: 411 LSEVPQIGDWLKKM-LHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVE 587
+SE+ D+L + LH GGK R + TV+ T + K ++ ++ A + VE
Sbjct: 45 VSELSDGEDFLTEAALHLAKAGGKRFRPLFTVL---TAQLGPKASDPSVVTAATV---VE 98
Query: 588 MFQAYCIVLDDIMDGSSVRRGMP 656
+ + DD+MD +S+RRG P
Sbjct: 99 LVHLATLYHDDVMDEASMRRGAP 121
>UniRef50_Q9RUJ1 Cluster: Geranylgeranyl diphosphate synthase; n=2;
Deinococcus|Rep: Geranylgeranyl diphosphate synthase -
Deinococcus radiodurans
Length = 329
Score = 33.9 bits (74), Expect = 3.5
Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Frame = +3
Query: 414 SEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVT--EHTLKLACKLGWCVE 587
S P++ + + Y GGK R + S + E T E L LA L E
Sbjct: 17 SATPELARFYALLRDYPQRGGKGIRSELLLASARAHGLSESDTGWESALWLAAAL----E 72
Query: 588 MFQAYCIVLDDIMDGSSVRRGMP 656
+FQ + +V DDI D S RRG P
Sbjct: 73 LFQNWVLVHDDIEDDSEERRGRP 95
>UniRef50_Q5KSN3 Cluster: Geranylgeranyl diphosphate synthase; n=1;
Streptomyces sp. KO-3988|Rep: Geranylgeranyl diphosphate
synthase - Streptomyces sp. KO-3988
Length = 388
Score = 33.9 bits (74), Expect = 3.5
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 582 VEMFQAYCIVLDDIMDGSSVRRGMP 656
+E+F A+ ++ DD+MD S RRG P
Sbjct: 118 LELFHAFTLIHDDVMDASDTRRGRP 142
>UniRef50_Q8IDD4 Cluster: Ser/Thr protein kinase; n=1; Plasmodium
falciparum 3D7|Rep: Ser/Thr protein kinase - Plasmodium
falciparum (isolate 3D7)
Length = 4044
Score = 33.9 bits (74), Expect = 3.5
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Frame = +2
Query: 275 PQLIRYKNNSANMTTASKNLEIINEKKMFDDLLPXSNYDTTKQIQVI*SAPNRGLVEKDA 454
P L + NN+ N + N E INE+K D++ ++ K+IQ L K
Sbjct: 2133 PSLNKNNNNNNNNNNNNNNNEYINEEKK-DNINEKNDISKDKKIQSNNETQKEPLFSKLL 2191
Query: 455 SLQFGWR*TYKRNNYCDFIQNN-*KTGKSHRTYFEIG 562
+ FG + T+++N D + + K SH Y IG
Sbjct: 2192 NKAFGKKYTHEKNYKNDNVVGDIHKCSDSHILYKGIG 2228
>UniRef50_A0CE39 Cluster: Chromosome undetermined scaffold_17, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_17,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 366
Score = 33.9 bits (74), Expect = 3.5
Identities = 23/71 (32%), Positives = 32/71 (45%)
Frame = +3
Query: 444 KKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYCIVLDDI 623
K HY GK R + ++ IEK + TE A +E+ +V DDI
Sbjct: 71 KASTHYFSKEGKLIRPMLNLLYANHIEKNSQHTEQQRIWAA----VIEILHVASLVHDDI 126
Query: 624 MDGSSVRRGMP 656
+D S RRG+P
Sbjct: 127 LDASDTRRGIP 137
>UniRef50_A7IAG2 Cluster: Farnesyltranstransferase; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Farnesyltranstransferase -
Methanoregula boonei (strain 6A8)
Length = 325
Score = 33.9 bits (74), Expect = 3.5
Identities = 22/75 (29%), Positives = 33/75 (44%)
Frame = +3
Query: 432 GDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYCIV 611
G+ + H GGK R ++S I LA +E+ + ++
Sbjct: 32 GELDRASAHLLSAGGKRLRPAVVMLSADAIRHGSSKDVMPAALA------LEVTHTFTLI 85
Query: 612 LDDIMDGSSVRRGMP 656
DDIMDG S+RRG+P
Sbjct: 86 HDDIMDGDSLRRGVP 100
>UniRef50_A6LXN0 Cluster: Polyprenyl synthetase; n=1; Clostridium
beijerinckii NCIMB 8052|Rep: Polyprenyl synthetase -
Clostridium beijerinckii NCIMB 8052
Length = 275
Score = 33.5 bits (73), Expect = 4.6
Identities = 21/61 (34%), Positives = 31/61 (50%)
Frame = +3
Query: 468 VGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYCIVLDDIMDGSSVRR 647
V GK+ R ++S K I PE + +KL L +E+ + +V DDI+D RR
Sbjct: 44 VPGKYLRPSLIILSAKAIN-PEMTIDERMKLI-NLCVAIELIHSASLVHDDIIDNDLFRR 101
Query: 648 G 650
G
Sbjct: 102 G 102
>UniRef50_Q9VBE7 Cluster: CG14238-PA; n=5; Endopterygota|Rep:
CG14238-PA - Drosophila melanogaster (Fruit fly)
Length = 523
Score = 33.5 bits (73), Expect = 4.6
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = -2
Query: 430 IWGTSDNLDLFCSVIITXREEIVEHFLFINYFEIF*GCRHICAIILISDQLWPIFVCN 257
+WG N+ L + +T R I+ + INY +F C++ IIL QL+ ++V N
Sbjct: 261 VWGIVLNVILQDAPFLTFRLLIIFQYKIINYMNVFFTCKNSLVIIL---QLYRLYVVN 315
>UniRef50_Q0UDQ3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 415
Score = 33.5 bits (73), Expect = 4.6
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +3
Query: 528 PEKVTEHTLKLACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMP 656
PE++ H AC+LGW +++DD+ D S +RRG+P
Sbjct: 158 PERIGSHN---ACQLGW----LHTASLLVDDVEDSSLLRRGIP 193
>UniRef50_UPI0000DAE4B0 Cluster: hypothetical protein
Rgryl_01000434; n=1; Rickettsiella grylli|Rep:
hypothetical protein Rgryl_01000434 - Rickettsiella
grylli
Length = 322
Score = 33.1 bits (72), Expect = 6.1
Identities = 27/92 (29%), Positives = 45/92 (48%)
Frame = +3
Query: 375 LXVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTL 554
L + L N+ +++P I K +++ GGK R + ++S K K EH
Sbjct: 14 LDEVDALINRCLYADIPLIPQLAKHLINS---GGKRLRPLIALLSAKAFGYQGK--EHR- 67
Query: 555 KLACKLGWCVEMFQAYCIVLDDIMDGSSVRRG 650
+LA L E+ ++ DD++DGS +RRG
Sbjct: 68 RLAASL----ELIHGATLLHDDVIDGSVLRRG 95
>UniRef50_A1SLA1 Cluster: Polyprenyl synthetase; n=1; Nocardioides
sp. JS614|Rep: Polyprenyl synthetase - Nocardioides sp.
(strain BAA-499 / JS614)
Length = 358
Score = 33.1 bits (72), Expect = 6.1
Identities = 22/72 (30%), Positives = 33/72 (45%)
Frame = +3
Query: 441 LKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYCIVLDD 620
L + H ++ GGK R ++ + + E L AC +E+ A +V DD
Sbjct: 42 LVREAHTSVSGGKRFRAAFCYWGHRAVAA-DVPDETALVRACA---SLELLHASALVHDD 97
Query: 621 IMDGSSVRRGMP 656
+MD S RRG P
Sbjct: 98 LMDASDTRRGHP 109
>UniRef50_A1R5E5 Cluster: Putative polyprenyl synthetase; n=1;
Arthrobacter aurescens TC1|Rep: Putative polyprenyl
synthetase - Arthrobacter aurescens (strain TC1)
Length = 364
Score = 33.1 bits (72), Expect = 6.1
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 573 GWCVEMFQAYCIVLDDIMDGSSVRRGMP 656
G +E+FQA ++ DDI+D S RRG P
Sbjct: 82 GCALELFQAAALIHDDIIDRSDTRRGGP 109
>UniRef50_Q6KZR8 Cluster: Farnesyl pyrophosphate synthetase/
geranyltransferase/farnesyltransferase/hexaprenyl
diphosphate synthase; n=4; Thermoplasmatales|Rep:
Farnesyl pyrophosphate synthetase/
geranyltransferase/farnesyltransferase/hexaprenyl
diphosphate synthase - Picrophilus torridus
Length = 328
Score = 33.1 bits (72), Expect = 6.1
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +3
Query: 399 NKSKLSEVPQIGDWLKKMLHYNL-VGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLG 575
N+ L + +L M Y + GGK R + T++S++ I E E L LA G
Sbjct: 19 NQRLLDSIQTDEKYLYDMARYTIEAGGKRFRPLLTILSFE-IASGESY-EKILDLAA--G 74
Query: 576 WCVEMFQAYCIVLDDIMDGSSVRRG 650
+ E+ ++ DDI+D S +RRG
Sbjct: 75 Y--ELIHTASLIHDDIIDHSDMRRG 97
>UniRef50_Q6F8G0 Cluster: Octaprenyl-diphosphate synthase; n=6;
Proteobacteria|Rep: Octaprenyl-diphosphate synthase -
Acinetobacter sp. (strain ADP1)
Length = 325
Score = 32.7 bits (71), Expect = 8.0
Identities = 21/67 (31%), Positives = 32/67 (47%)
Frame = +3
Query: 456 HYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYCIVLDDIMDGS 635
H GGK R I +++ K + + +H KL +EM +V DD++D S
Sbjct: 41 HVVEAGGKRMRPIMCLLAAKACGSTD-LEQHR-----KLAAIIEMLHTATLVHDDVVDES 94
Query: 636 SVRRGMP 656
+RRG P
Sbjct: 95 GLRRGRP 101
>UniRef50_Q0C4D6 Cluster: Polyprenyl synthetase; n=4;
Alphaproteobacteria|Rep: Polyprenyl synthetase -
Hyphomonas neptunium (strain ATCC 15444)
Length = 337
Score = 32.7 bits (71), Expect = 8.0
Identities = 21/62 (33%), Positives = 30/62 (48%)
Frame = +3
Query: 471 GGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYCIVLDDIMDGSSVRRG 650
GGK R + T+I+ + K T H L A VE ++ DD++D S +RRG
Sbjct: 57 GGKRLRPMITLIAAHAVGKANAAT-HALAAA------VEFIHTATLLHDDVVDESDLRRG 109
Query: 651 MP 656
P
Sbjct: 110 KP 111
>UniRef50_Q8ZXZ8 Cluster: Polyprenyl synthetase; n=6;
Thermoproteales|Rep: Polyprenyl synthetase - Pyrobaculum
aerophilum
Length = 334
Score = 32.7 bits (71), Expect = 8.0
Identities = 21/74 (28%), Positives = 34/74 (45%)
Frame = +3
Query: 435 DWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYCIVL 614
D+ +++ GGK R + T+ + + I K A VE+ Y ++
Sbjct: 30 DFRDAVMYQVKTGGKRLRPLLTLATAEAISGQWKP-------ALPAAAIVELIHNYSLIY 82
Query: 615 DDIMDGSSVRRGMP 656
DDI+D +RRGMP
Sbjct: 83 DDIIDRGDLRRGMP 96
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 585,273,636
Number of Sequences: 1657284
Number of extensions: 11158105
Number of successful extensions: 27834
Number of sequences better than 10.0: 83
Number of HSP's better than 10.0 without gapping: 27047
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27811
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50000004659
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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