Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_D05
         (659 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0411 + 29151647-29151790,29152974-29153039,29153398-291535...    87   1e-17
04_04_1432 - 33558895-33559023,33559215-33559286,33559405-335594...    76   3e-14
01_06_0363 - 28745581-28745709,28746043-28746114,28746373-287464...    48   9e-06
04_04_1431 - 33551127-33551300,33551362-33551433,33551508-335515...    47   2e-05
05_06_0265 - 26759960-26760088,26760315-26760386,26760457-267605...    42   4e-04
10_08_1052 - 22567937-22568329,22568436-22568669,22568787-225691...    31   0.81 
12_01_0979 - 9914779-9915327,9915409-9915536,9915947-9916050,991...    29   2.5  
05_07_0261 + 28764571-28764733,28766039-28766153,28766241-287663...    29   2.5  
03_05_0432 - 24231984-24233048,24233391-24235160,24235261-242365...    28   7.6  
02_03_0118 - 15451031-15451123,15451744-15451831,15451914-154519...    28   7.6  

>01_06_0411 +
           29151647-29151790,29152974-29153039,29153398-29153538,
           29153638-29153724,29153968-29154084,29154177-29154265,
           29154510-29154561,29154667-29154762,29154835-29154879,
           29155002-29155091,29155164-29155235,29155490-29155618
          Length = 375

 Score = 87.0 bits (206), Expect = 1e-17
 Identities = 37/71 (52%), Positives = 49/71 (69%)
 Frame = +3

Query: 447 KMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYCIVLDDIM 626
           KML YN++GGK  RGI+ + S+K ++  + + +    LAC LGWC+E  QAY +VLDDIM
Sbjct: 70  KMLDYNVLGGKCNRGISVIDSFKMLKGTDVLNKEETFLACTLGWCIEWLQAYFLVLDDIM 129

Query: 627 DGSSVRRGMPC 659
           D S  RRG PC
Sbjct: 130 DNSQTRRGQPC 140


>04_04_1432 -
           33558895-33559023,33559215-33559286,33559405-33559494,
           33559574-33559618,33559693-33559788,33559905-33559956,
           33560044-33560132,33560226-33560342,33560448-33560534,
           33560646-33560761,33560854-33560878,33561816-33562121
          Length = 407

 Score = 75.8 bits (178), Expect = 3e-14
 Identities = 34/74 (45%), Positives = 45/74 (60%)
 Frame = +3

Query: 438 WLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYCIVLD 617
           W+ KM+ YN+ GGK  RG++ V SY  + +  +V +    LAC LGWCVE  QA  +VLD
Sbjct: 99  WVAKMMDYNVPGGKLNRGLSVVDSYMLLRQGTEVDDEDFYLACVLGWCVEWLQASALVLD 158

Query: 618 DIMDGSSVRRGMPC 659
           DI D +  RR   C
Sbjct: 159 DITDNAYTRRDNLC 172


>01_06_0363 -
           28745581-28745709,28746043-28746114,28746373-28746417,
           28746523-28746618,28747029-28747080,28747232-28747305,
           28747386-28747502,28747844-28747930,28748186-28748281,
           28748508-28748654
          Length = 304

 Score = 47.6 bits (108), Expect = 9e-06
 Identities = 29/74 (39%), Positives = 37/74 (50%)
 Frame = +3

Query: 438 WLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYCIVLD 617
           WL+ ML YN++GG+       ++      KP   T        + GW     QAY +VLD
Sbjct: 46  WLESMLDYNVLGGEKN-----MLFRNNATKPNNGT-------LRYGW---QLQAYFLVLD 90

Query: 618 DIMDGSSVRRGMPC 659
           DIMD S  RRG PC
Sbjct: 91  DIMDNSQTRRGKPC 104


>04_04_1431 -
           33551127-33551300,33551362-33551433,33551508-33551597,
           33551671-33551715,33551785-33551880,33552245-33552296,
           33552412-33552500,33552590-33552887,33553007-33553109,
           33553328-33553352,33553503-33553763
          Length = 434

 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 20/46 (43%), Positives = 30/46 (65%)
 Frame = +3

Query: 438 WLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLG 575
           WL +M+ YN+ GGK  RG++ + SY  +++  +VTE    LAC LG
Sbjct: 84  WLAQMIDYNVPGGKLNRGLSVIDSYLLLKQGSEVTEDDFFLACVLG 129


>05_06_0265 -
           26759960-26760088,26760315-26760386,26760457-26760546,
           26760649-26760693,26760785-26760880,26760980-26761031,
           26761209-26761297,26761388-26761504,26761680-26761737,
           26761834-26761936,26762027-26762051,26762677-26762826
          Length = 341

 Score = 41.9 bits (94), Expect = 4e-04
 Identities = 18/46 (39%), Positives = 29/46 (63%)
 Frame = +3

Query: 438 WLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLG 575
           W+ +ML YN+ GGK  RG++ V SYK ++    +++  + LA  LG
Sbjct: 47  WIDRMLDYNVPGGKCNRGLSVVDSYKLLKGTNVLSQEDMFLASTLG 92


>10_08_1052 -
           22567937-22568329,22568436-22568669,22568787-22569111,
           22569239-22569484,22569576-22569916,22570070-22570150,
           22570275-22570394,22570549-22570650,22570900-22571035,
           22571210-22571362,22572605-22572906
          Length = 810

 Score = 31.1 bits (67), Expect = 0.81
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = -3

Query: 354 FFSLIISRFFEAVVIFALLFLYLI 283
           FFSL I +F  ++ +FAL+F Y+I
Sbjct: 362 FFSLSIRKFLISIAVFALVFFYMI 385


>12_01_0979 -
           9914779-9915327,9915409-9915536,9915947-9916050,
           9919832-9919946,9921036-9921528
          Length = 462

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
 Frame = +3

Query: 471 GGKHTR-GITTVISYKTIEKP---EKVTEHTLKLACKLGWCVEMFQAYCIVLDDIMDGSS 638
           GGK  R  +  ++S  T E     E  TEH      +L   +EM     ++ DD++D S 
Sbjct: 180 GGKRLRPALVFLVSRATAELAGLLELTTEHQ-----RLAEIIEMIHTASLIHDDVIDDSG 234

Query: 639 VRRG 650
           +RRG
Sbjct: 235 MRRG 238


>05_07_0261 +
           28764571-28764733,28766039-28766153,28766241-28766344,
           28766571-28766698,28766765-28767328
          Length = 357

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
 Frame = +3

Query: 471 GGKHTR-GITTVISYKTIEKP---EKVTEHTLKLACKLGWCVEMFQAYCIVLDDIMDGSS 638
           GGK  R  +  ++S  T E     E  TEH      +L   +EM     ++ DD++D S 
Sbjct: 70  GGKRLRPALVFLVSRATAELAGLLELTTEHQ-----RLAEIIEMIHTASLIHDDVIDDSG 124

Query: 639 VRRG 650
           +RRG
Sbjct: 125 MRRG 128


>03_05_0432 - 24231984-24233048,24233391-24235160,24235261-24236582,
            24236668-24237013
          Length = 1500

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +2

Query: 302  SANMTTASKNLEIINEKKMFDDLLPXSNYD-TTKQIQV 412
            +AN+  A K +E++  K++ DD L   NY+   K IQ+
Sbjct: 1205 NANLQEARKQIEVLKLKEILDDDLIEMNYEQMLKDIQL 1242


>02_03_0118 -
           15451031-15451123,15451744-15451831,15451914-15451985,
           15452896-15453018,15453541-15453629
          Length = 154

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +2

Query: 200 RLHDIVDMSVFNFLKITRKVTYKYWPQLIRY 292
           R + I+D+ + N++K+T K+ Y Y  +L  Y
Sbjct: 71  RTNLIIDLKIQNYVKLTYKLHYSYIEKLSMY 101


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,652,481
Number of Sequences: 37544
Number of extensions: 299122
Number of successful extensions: 764
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 763
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1655832080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)