Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_D05
(659 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071445-1|AAL49067.1| 419|Drosophila melanogaster RE52884p pro... 87 2e-17
AJ009963-1|CAA08919.1| 380|Drosophila melanogaster farnesyl pyr... 87 2e-17
AF132554-1|AAD27853.1| 419|Drosophila melanogaster GM06581p pro... 87 2e-17
AE013599-1264|AAF58670.1| 419|Drosophila melanogaster CG12389-P... 87 2e-17
AE014297-3953|AAF56595.1| 523|Drosophila melanogaster CG14238-P... 33 0.26
AY071599-1|AAL49221.1| 338|Drosophila melanogaster RE65121p pro... 30 3.2
AF049659-1|AAC05273.1| 338|Drosophila melanogaster geranylgeran... 30 3.2
AE014296-1239|AAF50574.1| 338|Drosophila melanogaster CG8593-PA... 30 3.2
BT022901-1|AAY55317.1| 612|Drosophila melanogaster IP12579p pro... 29 7.4
BT022889-1|AAY55305.1| 416|Drosophila melanogaster IP12479p pro... 29 7.4
AY071655-1|AAL49277.1| 485|Drosophila melanogaster RE73545p pro... 29 7.4
AE014298-2285|AAF48539.3| 572|Drosophila melanogaster CG8916-PA... 29 7.4
AE013599-3480|AAF46908.2| 485|Drosophila melanogaster CG30265-P... 29 7.4
AE014297-4727|AAF57135.2| 436|Drosophila melanogaster CG31005-P... 28 9.8
>AY071445-1|AAL49067.1| 419|Drosophila melanogaster RE52884p
protein.
Length = 419
Score = 87.4 bits (207), Expect = 2e-17
Identities = 36/74 (48%), Positives = 50/74 (67%)
Frame = +3
Query: 438 WLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYCIVLD 617
W ++L YN+ GK RGI TV++YK + + +T +KLA LGWCVEM Q++ I+ D
Sbjct: 113 WFAQVLQYNVPRGKKNRGILTVLTYKNLVPTQDLTPENIKLAQYLGWCVEMLQSFFIISD 172
Query: 618 DIMDGSSVRRGMPC 659
D+MD S+ RRG PC
Sbjct: 173 DVMDNSTTRRGQPC 186
>AJ009963-1|CAA08919.1| 380|Drosophila melanogaster farnesyl
pyrophosphate synthase protein.
Length = 380
Score = 87.4 bits (207), Expect = 2e-17
Identities = 36/74 (48%), Positives = 50/74 (67%)
Frame = +3
Query: 438 WLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYCIVLD 617
W ++L YN+ GK RGI TV++YK + + +T +KLA LGWCVEM Q++ I+ D
Sbjct: 74 WFAQVLQYNVPRGKKNRGILTVLTYKNLVPTQDLTPENIKLAQYLGWCVEMLQSFFIISD 133
Query: 618 DIMDGSSVRRGMPC 659
D+MD S+ RRG PC
Sbjct: 134 DVMDNSTTRRGQPC 147
>AF132554-1|AAD27853.1| 419|Drosophila melanogaster GM06581p
protein.
Length = 419
Score = 87.4 bits (207), Expect = 2e-17
Identities = 36/74 (48%), Positives = 50/74 (67%)
Frame = +3
Query: 438 WLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYCIVLD 617
W ++L YN+ GK RGI TV++YK + + +T +KLA LGWCVEM Q++ I+ D
Sbjct: 113 WFAQVLQYNVPRGKKNRGILTVLTYKNLVPTQDLTPENIKLAQYLGWCVEMLQSFFIISD 172
Query: 618 DIMDGSSVRRGMPC 659
D+MD S+ RRG PC
Sbjct: 173 DVMDNSTTRRGQPC 186
>AE013599-1264|AAF58670.1| 419|Drosophila melanogaster CG12389-PA
protein.
Length = 419
Score = 87.4 bits (207), Expect = 2e-17
Identities = 36/74 (48%), Positives = 50/74 (67%)
Frame = +3
Query: 438 WLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYCIVLD 617
W ++L YN+ GK RGI TV++YK + + +T +KLA LGWCVEM Q++ I+ D
Sbjct: 113 WFAQVLQYNVPRGKKNRGILTVLTYKNLVPTQDLTPENIKLAQYLGWCVEMLQSFFIISD 172
Query: 618 DIMDGSSVRRGMPC 659
D+MD S+ RRG PC
Sbjct: 173 DVMDNSTTRRGQPC 186
>AE014297-3953|AAF56595.1| 523|Drosophila melanogaster CG14238-PA
protein.
Length = 523
Score = 33.5 bits (73), Expect = 0.26
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = -2
Query: 430 IWGTSDNLDLFCSVIITXREEIVEHFLFINYFEIF*GCRHICAIILISDQLWPIFVCN 257
+WG N+ L + +T R I+ + INY +F C++ IIL QL+ ++V N
Sbjct: 261 VWGIVLNVILQDAPFLTFRLLIIFQYKIINYMNVFFTCKNSLVIIL---QLYRLYVVN 315
>AY071599-1|AAL49221.1| 338|Drosophila melanogaster RE65121p
protein.
Length = 338
Score = 29.9 bits (64), Expect = 3.2
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +3
Query: 555 KLACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMP 656
KLA ++G V+M +++DDI D S +RRG+P
Sbjct: 57 KLA-QIGDIVQMLHNSSLLIDDIEDNSILRRGVP 89
>AF049659-1|AAC05273.1| 338|Drosophila melanogaster geranylgeranyl
pyrophosphate synthaseprotein.
Length = 338
Score = 29.9 bits (64), Expect = 3.2
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +3
Query: 555 KLACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMP 656
KLA ++G V+M +++DDI D S +RRG+P
Sbjct: 57 KLA-QIGDIVQMLHNSSLLIDDIEDNSILRRGVP 89
>AE014296-1239|AAF50574.1| 338|Drosophila melanogaster CG8593-PA
protein.
Length = 338
Score = 29.9 bits (64), Expect = 3.2
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +3
Query: 555 KLACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMP 656
KLA ++G V+M +++DDI D S +RRG+P
Sbjct: 57 KLA-QIGDIVQMLHNSSLLIDDIEDNSILRRGVP 89
>BT022901-1|AAY55317.1| 612|Drosophila melanogaster IP12579p
protein.
Length = 612
Score = 28.7 bits (61), Expect = 7.4
Identities = 14/57 (24%), Positives = 25/57 (43%)
Frame = +3
Query: 438 WLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYCI 608
W+ +H + + +T+V++ TI + +K A L W + M YCI
Sbjct: 334 WVSFWIHREATSDRVSLCVTSVLTLSTISLDSRTDLPKVKYATALDWFLLMSFLYCI 390
>BT022889-1|AAY55305.1| 416|Drosophila melanogaster IP12479p
protein.
Length = 416
Score = 28.7 bits (61), Expect = 7.4
Identities = 14/57 (24%), Positives = 25/57 (43%)
Frame = +3
Query: 438 WLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYCI 608
W+ +H + + +T+V++ TI + +K A L W + M YCI
Sbjct: 138 WVSFWIHREATSDRVSLCVTSVLTLSTISLDSRTDLPKVKYATALDWFLLMSFLYCI 194
>AY071655-1|AAL49277.1| 485|Drosophila melanogaster RE73545p
protein.
Length = 485
Score = 28.7 bits (61), Expect = 7.4
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +1
Query: 565 VSWDGVSKCFRHIALCWMTLWMVQAXDAA 651
+ W G+S +AL W W V A D A
Sbjct: 180 IGWPGISYVSAGLALAWCAFWFVFAADNA 208
>AE014298-2285|AAF48539.3| 572|Drosophila melanogaster CG8916-PA
protein.
Length = 572
Score = 28.7 bits (61), Expect = 7.4
Identities = 14/57 (24%), Positives = 25/57 (43%)
Frame = +3
Query: 438 WLKKMLHYNLVGGKHTRGITTVISYKTIEKPEKVTEHTLKLACKLGWCVEMFQAYCI 608
W+ +H + + +T+V++ TI + +K A L W + M YCI
Sbjct: 294 WVSFWIHREATSDRVSLCVTSVLTLSTISLDSRTDLPKVKYATALDWFLLMSFLYCI 350
>AE013599-3480|AAF46908.2| 485|Drosophila melanogaster CG30265-PA
protein.
Length = 485
Score = 28.7 bits (61), Expect = 7.4
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +1
Query: 565 VSWDGVSKCFRHIALCWMTLWMVQAXDAA 651
+ W G+S +AL W W V A D A
Sbjct: 180 IGWPGISYVSAGLALAWCAFWFVFAADNA 208
>AE014297-4727|AAF57135.2| 436|Drosophila melanogaster CG31005-PA
protein.
Length = 436
Score = 28.3 bits (60), Expect = 9.8
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +3
Query: 474 GKHTRGITTVISYKTIEKPEKVTEHTL-KLACKLGWCVEMFQAYCIVLDDIMDGSSVRRG 650
GK R + T++ K I H L ++ EM + +V DD++D S RRG
Sbjct: 153 GKALRPMVTMLMAKAINYHLNNESHQLVHKQRQIALFSEMVHSASLVHDDVIDQSDFRRG 212
Query: 651 MP 656
P
Sbjct: 213 KP 214
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,498,756
Number of Sequences: 53049
Number of extensions: 528470
Number of successful extensions: 1436
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1436
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2827453950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -