Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_D03
         (667 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0011 + 13703564-13703766,13704685-13705526,13705628-137057...    31   0.82 
09_06_0177 + 21365314-21366100,21367451-21367578,21367715-213678...    29   4.4  
07_02_0014 + 11799589-11799788,11799813-11800074                       28   5.8  
05_07_0289 + 29004842-29005213,29005318-29005605,29005707-290058...    28   5.8  
03_04_0044 + 16754638-16754676,16755472-16755598,16756325-167564...    28   5.8  
12_02_0529 - 20067974-20068588,20069982-20070048,20070156-200702...    28   7.7  
01_01_1169 + 9313135-9313332,9313496-9314229,9314933-9317036           28   7.7  

>09_04_0011 +
           13703564-13703766,13704685-13705526,13705628-13705704,
           13706294-13706339,13706479-13706722,13710078-13710150,
           13711119-13711235
          Length = 533

 Score = 31.1 bits (67), Expect = 0.82
 Identities = 11/20 (55%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
 Frame = -3

Query: 392 HLHHPQLGMYTSY-YSSLWP 336
           H HHP++G Y+SY + S WP
Sbjct: 205 HHHHPKMGFYSSYHHPSTWP 224


>09_06_0177 +
           21365314-21366100,21367451-21367578,21367715-21367870,
           21368006-21368196,21369392-21369434,21369537-21369627,
           21369859-21369935,21370278-21370366,21370474-21370657,
           21370885-21371138,21371465-21371567,21371646-21371977,
           21372060-21372504
          Length = 959

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +2

Query: 122 CTENESGPFVVFFLPAIVGCLTILLARRWANSQVS 226
           C  ++    V+ FLPA     T LL+RRW N  VS
Sbjct: 24  CLPDDLVHHVLSFLPAPDAACTSLLSRRWRNLWVS 58


>07_02_0014 + 11799589-11799788,11799813-11800074
          Length = 153

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +2

Query: 314 MVHPGAKKATGTNNKKCTYPVEDDVSGGKRV 406
           + HP       T+NK+  YP ED+   G R+
Sbjct: 121 LYHPQTSGQAETSNKQIKYPTEDNACNGGRM 151


>05_07_0289 +
           29004842-29005213,29005318-29005605,29005707-29005853,
           29005939-29006175,29006261-29006524,29006609-29006725,
           29006991-29007042,29007903-29008303,29008380-29008598,
           29008692-29008925
          Length = 776

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 13/34 (38%), Positives = 22/34 (64%)
 Frame = -2

Query: 123 QLITHMLKLLNSFTINNFLNVLHNKHQHDDMCKA 22
           +LI H L+L+  +TIN +   + N  + DD+C+A
Sbjct: 266 KLIKHNLRLV-LYTINKYYPDMSNDERFDDICQA 298


>03_04_0044 +
           16754638-16754676,16755472-16755598,16756325-16756451,
           16756866-16757431,16757896-16758211,16758373-16758613,
           16758734-16758823,16759343-16759780,16759877-16760185,
           16760392-16760406
          Length = 755

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 13/34 (38%), Positives = 15/34 (44%)
 Frame = +2

Query: 296 PPIACKMVHPGAKKATGTNNKKCTYPVEDDVSGG 397
           PP  CK + PG     G    +  YPV   V GG
Sbjct: 592 PPHQCKQMFPGGPAGYGGFTNQNGYPVNTGVIGG 625


>12_02_0529 -
           20067974-20068588,20069982-20070048,20070156-20070264,
           20070357-20070402,20070501-20070636,20070745-20070866,
           20070944-20071306,20071914-20072043,20072129-20072202,
           20072620-20072709,20072836-20072875,20073047-20073117,
           20074248-20074277
          Length = 630

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 10/22 (45%), Positives = 17/22 (77%)
 Frame = -2

Query: 519 WGICGNGMCFGGMGPSASLISA 454
           WG+ G G+  GG+G +++LI+A
Sbjct: 23  WGVQGLGLVVGGIGGASALITA 44


>01_01_1169 + 9313135-9313332,9313496-9314229,9314933-9317036
          Length = 1011

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 16/45 (35%), Positives = 27/45 (60%)
 Frame = +3

Query: 252 DGGKLLKTRSLRDLCLLSLVKWFTLERKRPQGRIIRSVHTQLRMM 386
           +G + L +R L D+C LSL+++ +L     Q R+ RSV    ++M
Sbjct: 662 EGCRWLSSRELDDICKLSLLRYLSLRDTGVQ-RLPRSVGRLKQLM 705


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,720,621
Number of Sequences: 37544
Number of extensions: 389560
Number of successful extensions: 922
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 922
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1679486824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)